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MS013744 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013744
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein no-on-transient A-like
Genome locationscaffold263:640383..640718
RNA-Seq ExpressionMS013744
SyntenyMS013744
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046715.1 E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa]2.5e-1050Show/hide
Query:  MAAIKALVPLLLLALLLFSEPLASSAAAHGEPSNSPSGMVRRNVLQTAARRIADNGAESSSEGKIN-VHIKKGIRGRPIGIPRG----RKSAANRSRVAS
        MAAI+ LV + LLALL FSE L +        S+S +G+  RN+L T A RI +   ESS + K N +H K   R RPI I        KSA NRSRVAS
Subjt:  MAAIKALVPLLLLALLLFSEPLASSAAAHGEPSNSPSGMVRRNVLQTAARRIADNGAESSSEGKIN-VHIKKGIRGRPIGIPRG----RKSAANRSRVAS

Query:  FGVGSVLWICAFFGLF
        F VGS+L IC F GLF
Subjt:  FGVGSVLWICAFFGLF

KAA0068047.1 protein no-on-transient A-like [Cucumis melo var. makuwa]7.6e-1555.26Show/hide
Query:  MAAIKALVPLLLLALLLFSEPLASSAAAHGEPSNSPSGMVRRNVLQTAARRIADNGAESSSEGKINVHIKKGIRG--RPI----GIPRGRKSAANRSRVA
        MAAIK+L+ + LLALL FSE L++SAA     SNS +GM+RRNVLQTA   IAD      SEGK+NVHIK+G  G  RP+    G    RKSAA+RS+VA
Subjt:  MAAIKALVPLLLLALLLFSEPLASSAAAHGEPSNSPSGMVRRNVLQTAARRIADNGAESSSEGKINVHIKKGIRG--RPI----GIPRGRKSAANRSRVA

Query:  SFGVGSVLWICAFF
        SFG+G +L+    F
Subjt:  SFGVGSVLWICAFF

KAG6575859.1 hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia]5.1e-1961.11Show/hide
Query:  MAAIKALVPLLLLALLLFSEPLASSAAAHGEPSNSPSGMVRRNVLQTAARRIADNGAESSSEGKINVHIKKGIRGRPIGIPRGRKSAANRSRVASFGVGS
        MAA+K+LV + LLALLLFSE L +SA      SNS +GM+RRNVLQTAA +IADN  ESS E K+NVHIK+  R RP+     R SAANRSR+AS GVGS
Subjt:  MAAIKALVPLLLLALLLFSEPLASSAAAHGEPSNSPSGMVRRNVLQTAARRIADNGAESSSEGKINVHIKKGIRGRPIGIPRGRKSAANRSRVASFGVGS

Query:  VLWICAFF
        VL +   F
Subjt:  VLWICAFF

KAG6593163.1 hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia]1.9e-1351.35Show/hide
Query:  MAAIKALVPLLLLALLLFSEPLASSAAAHGEPSNSPSGMVRRNVLQTAARRIADNGAESSSEGKINVHIKKGIRGRPIGIPRGRKSAANRSRVASFGVGS
        MAAIKAL+ + L+ALLLF E L +SAA H   S S +G++RRN++QT A           +E K NVHIK+ +R RP+ I R + SAANRSR A  GVGS
Subjt:  MAAIKALVPLLLLALLLFSEPLASSAAAHGEPSNSPSGMVRRNVLQTAARRIADNGAESSSEGKINVHIKKGIRGRPIGIPRGRKSAANRSRVASFGVGS

Query:  VLWICAFFGLF
        +L I    GLF
Subjt:  VLWICAFFGLF

KGN44886.1 hypothetical protein Csa_015765 [Cucumis sativus]3.4e-1557.39Show/hide
Query:  MAAIKALVPLLLLALLLFSEPLASSAAAHGEPSNSPSGMVRRNVLQTAARRIADNGAESSSEGKINVHIKKGIRG--RPIGIPRG---RKSAANRSRVAS
        MAAIK+L+ + LLALL FSE L++SAA     SNS + M+RRN+LQTA   IAD      SEGK+NV IKKG  G  RPIG   G   R SAANRSRV S
Subjt:  MAAIKALVPLLLLALLLFSEPLASSAAAHGEPSNSPSGMVRRNVLQTAARRIADNGAESSSEGKINVHIKKGIRG--RPIGIPRG---RKSAANRSRVAS

Query:  FGVGSVLWICAFFGL
        FG+G +L+   FFGL
Subjt:  FGVGSVLWICAFFGL

TrEMBL top hitse value%identityAlignment
A0A0A0KAQ7 Uncharacterized protein1.6e-1557.39Show/hide
Query:  MAAIKALVPLLLLALLLFSEPLASSAAAHGEPSNSPSGMVRRNVLQTAARRIADNGAESSSEGKINVHIKKGIRG--RPIGIPRG---RKSAANRSRVAS
        MAAIK+L+ + LLALL FSE L++SAA     SNS + M+RRN+LQTA   IAD      SEGK+NV IKKG  G  RPIG   G   R SAANRSRV S
Subjt:  MAAIKALVPLLLLALLLFSEPLASSAAAHGEPSNSPSGMVRRNVLQTAARRIADNGAESSSEGKINVHIKKGIRG--RPIGIPRG---RKSAANRSRVAS

Query:  FGVGSVLWICAFFGL
        FG+G +L+   FFGL
Subjt:  FGVGSVLWICAFFGL

A0A5A7VLE5 Protein no-on-transient A-like3.7e-1555.26Show/hide
Query:  MAAIKALVPLLLLALLLFSEPLASSAAAHGEPSNSPSGMVRRNVLQTAARRIADNGAESSSEGKINVHIKKGIRG--RPI----GIPRGRKSAANRSRVA
        MAAIK+L+ + LLALL FSE L++SAA     SNS +GM+RRNVLQTA   IAD      SEGK+NVHIK+G  G  RP+    G    RKSAA+RS+VA
Subjt:  MAAIKALVPLLLLALLLFSEPLASSAAAHGEPSNSPSGMVRRNVLQTAARRIADNGAESSSEGKINVHIKKGIRG--RPI----GIPRGRKSAANRSRVA

Query:  SFGVGSVLWICAFF
        SFG+G +L+    F
Subjt:  SFGVGSVLWICAFF

A0A5D3D3Y6 E3 ubiquitin-protein ligase MIEL1-like1.2e-1050Show/hide
Query:  MAAIKALVPLLLLALLLFSEPLASSAAAHGEPSNSPSGMVRRNVLQTAARRIADNGAESSSEGKIN-VHIKKGIRGRPIGIPRG----RKSAANRSRVAS
        MAAI+ LV + LLALL FSE L +        S+S +G+  RN+L T A RI +   ESS + K N +H K   R RPI I        KSA NRSRVAS
Subjt:  MAAIKALVPLLLLALLLFSEPLASSAAAHGEPSNSPSGMVRRNVLQTAARRIADNGAESSSEGKIN-VHIKKGIRGRPIGIPRG----RKSAANRSRVAS

Query:  FGVGSVLWICAFFGLF
        F VGS+L IC F GLF
Subjt:  FGVGSVLWICAFFGLF

A0A6J1GRX2 uncharacterized protein LOC1114564661.9e-0844.74Show/hide
Query:  MAAIKALVPLLLLALLLFSEPLASSAAAHGEPSNSPSGMVRRNVLQTAAR-RIADNGA--ESSSEGKINVHIKKGIRGRPIGIPRGRKSAANRSRVASFG
        MA IK+L+ + LLALLL SE L  SAA HG   +  + + RR+ LQTA R ++A+NG   + S E KI    ++ +R      P    S+AN S+ +SFG
Subjt:  MAAIKALVPLLLLALLLFSEPLASSAAAHGEPSNSPSGMVRRNVLQTAAR-RIADNGA--ESSSEGKINVHIKKGIRGRPIGIPRGRKSAANRSRVASFG

Query:  VGSVLWICAFFGLF
        VGS+L +C  FGLF
Subjt:  VGSVLWICAFFGLF

A0A6J1JZB1 uncharacterized protein LOC111488793 isoform X12.5e-0844.74Show/hide
Query:  MAAIKALVPLLLLALLLFSEPLASSAAAHGEPSNSPSGMVRRNVLQTAAR-RIADNGA--ESSSEGKINVHIKKGIRGRPIGIPRGRKSAANRSRVASFG
        MA IK+L+ + LLALLL  E L  SAA HG   +  +G+ R + LQTA R ++A+NG   + S E KI    ++ +R      P    S+AN SR +SFG
Subjt:  MAAIKALVPLLLLALLLFSEPLASSAAAHGEPSNSPSGMVRRNVLQTAAR-RIADNGA--ESSSEGKINVHIKKGIRGRPIGIPRGRKSAANRSRVASFG

Query:  VGSVLWICAFFGLF
        VGS+L +C  FGLF
Subjt:  VGSVLWICAFFGLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCATTAAAGCCCTAGTTCCGCTACTTCTTCTCGCTCTTCTCTTGTTCTCTGAACCGCTAGCCAGTTCCGCCGCCGCTCACGGCGAGCCTTCGAATTCCCCTTC
CGGAATGGTCCGCCGGAACGTTCTTCAGACGGCGGCTCGTCGGATTGCAGATAACGGTGCCGAGTCCTCTTCCGAAGGGAAAATCAATGTTCATATCAAAAAGGGGATCC
GAGGCCGACCAATAGGAATTCCCCGCGGTCGTAAATCGGCGGCGAATCGGAGCCGAGTAGCATCCTTCGGCGTCGGATCTGTGCTGTGGATCTGCGCTTTTTTCGGATTG
TTCGCG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCATTAAAGCCCTAGTTCCGCTACTTCTTCTCGCTCTTCTCTTGTTCTCTGAACCGCTAGCCAGTTCCGCCGCCGCTCACGGCGAGCCTTCGAATTCCCCTTC
CGGAATGGTCCGCCGGAACGTTCTTCAGACGGCGGCTCGTCGGATTGCAGATAACGGTGCCGAGTCCTCTTCCGAAGGGAAAATCAATGTTCATATCAAAAAGGGGATCC
GAGGCCGACCAATAGGAATTCCCCGCGGTCGTAAATCGGCGGCGAATCGGAGCCGAGTAGCATCCTTCGGCGTCGGATCTGTGCTGTGGATCTGCGCTTTTTTCGGATTG
TTCGCG
Protein sequenceShow/hide protein sequence
MAAIKALVPLLLLALLLFSEPLASSAAAHGEPSNSPSGMVRRNVLQTAARRIADNGAESSSEGKINVHIKKGIRGRPIGIPRGRKSAANRSRVASFGVGSVLWICAFFGL
FA