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MS013745 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013745
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein no-on-transient A-like
Genome locationscaffold263:642239..642604
RNA-Seq ExpressionMS013745
SyntenyMS013745
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046715.1 E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa]1.0e-0950Show/hide
Query:  MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAESSSGGKIN-VHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAA
        MAAI+ LV + LLALL FSESL TS        +S +G+  RNIL T AHRI +   ESS   K N +H K     RP +I G      K       SA 
Subjt:  MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAESSSGGKIN-VHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAA

Query:  NRSRVAFFGVGS-LCICIFFGLFV
        NRSRVA F VGS LCICIF GLF+
Subjt:  NRSRVAFFGVGS-LCICIFFGLFV

KAA0068047.1 protein no-on-transient A-like [Cucumis melo var. makuwa]2.0e-1354.46Show/hide
Query:  MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAESSSGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAAN
        MAAIK+L+ + LLALL FSESL+TSAA      NS +GML RN+LQTA H IAD      S GK+NVHIK+G G R R +      T     G R SAA+
Subjt:  MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAESSSGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAAN

Query:  RSRVAFFGVGSL
        RS+VA FG+G L
Subjt:  RSRVAFFGVGSL

KAG6575859.1 hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia]9.7e-1652.46Show/hide
Query:  MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAESSSGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAAN
        MAA+K+LV + LLALLLFSESL  SA       NS +GML RN+LQTAAH+IADN  ESS   K+NVHIK+           R  P      G R+SAAN
Subjt:  MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAESSSGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAAN

Query:  RSRVAFFGVGSLCICIFFGLFV
        RSR+A  GVGS  + +  GLF+
Subjt:  RSRVAFFGVGSLCICIFFGLFV

KAG6593163.1 hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia]2.9e-1250.4Show/hide
Query:  MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAA--HRIADNGAESSSGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSA
        MAAIKAL+ + L+ALLLF ESL TSAA H     S +G+L RNI+QT A  H++A+         K NVHIK+ +  RP V+ GR           +TSA
Subjt:  MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAA--HRIADNGAESSSGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSA

Query:  ANRSRVAFFGVGS-LCICIFFGLFV
        ANRSR AF GVGS LCI +  GLF+
Subjt:  ANRSRVAFFGVGS-LCICIFFGLFV

KGN44886.1 hypothetical protein Csa_015765 [Cucumis sativus]3.5e-1356.67Show/hide
Query:  MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAESSSGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAAN
        MAAIK+L+ + LLALL FSESL+TSAA      NS + ML RNILQTA H IAD      S GK+NV IKKG   R R I G  T T     G R+SAAN
Subjt:  MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAESSSGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAAN

Query:  RSRVAFFGVGSLCICIFFGL
        RSRV  FG+G L    FFGL
Subjt:  RSRVAFFGVGSLCICIFFGL

TrEMBL top hitse value%identityAlignment
A0A0A0KAQ7 Uncharacterized protein1.7e-1356.67Show/hide
Query:  MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAESSSGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAAN
        MAAIK+L+ + LLALL FSESL+TSAA      NS + ML RNILQTA H IAD      S GK+NV IKKG   R R I G  T T     G R+SAAN
Subjt:  MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAESSSGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAAN

Query:  RSRVAFFGVGSLCICIFFGL
        RSRV  FG+G L    FFGL
Subjt:  RSRVAFFGVGSLCICIFFGL

A0A5A7VLE5 Protein no-on-transient A-like9.8e-1454.46Show/hide
Query:  MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAESSSGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAAN
        MAAIK+L+ + LLALL FSESL+TSAA      NS +GML RN+LQTA H IAD      S GK+NVHIK+G G R R +      T     G R SAA+
Subjt:  MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAESSSGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAAN

Query:  RSRVAFFGVGSL
        RS+VA FG+G L
Subjt:  RSRVAFFGVGSL

A0A5D3D3Y6 E3 ubiquitin-protein ligase MIEL1-like5.1e-1050Show/hide
Query:  MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAESSSGGKIN-VHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAA
        MAAI+ LV + LLALL FSESL TS        +S +G+  RNIL T AHRI +   ESS   K N +H K     RP +I G      K       SA 
Subjt:  MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAESSSGGKIN-VHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAA

Query:  NRSRVAFFGVGS-LCICIFFGLFV
        NRSRVA F VGS LCICIF GLF+
Subjt:  NRSRVAFFGVGS-LCICIFFGLFV

A0A6J1GRX2 uncharacterized protein LOC1114564665.8e-0641.13Show/hide
Query:  MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTA-AHRIADNGAESSSGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAA
        MA IK+L+ + LLALLL SE L  SAA HG   +  + +  R+ LQTA  H++A+NG     G + +   K         I  R    V+R  G   S+A
Subjt:  MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTA-AHRIADNGAESSSGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAA

Query:  NRSRVAFFGVGS-LCICIFFGLFV
        N S+ + FGVGS LC+C  FGLF+
Subjt:  NRSRVAFFGVGS-LCICIFFGLFV

A0A6J1JZB1 uncharacterized protein LOC111488793 isoform X13.4e-0641.13Show/hide
Query:  MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTA-AHRIADNGAESSSGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAA
        MA IK+L+ + LLALLL  E L  SAA HG   +  +G+   + LQTA  H++A+NG     G + +   K         I  R    V+R  G   S+A
Subjt:  MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTA-AHRIADNGAESSSGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAA

Query:  NRSRVAFFGVGS-LCICIFFGLFV
        N SR + FGVGS LC+C  FGLF+
Subjt:  NRSRVAFFGVGS-LCICIFFGLFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCATTAAAGCCCTAGTTCCGTTACTTCTTCTCGCTCTTCTCTTGTTCTCTGAATCCCTAGCCACTTCCGCCGCCGCTCACGGCGAGCCTTGGAATTCGCCCTC
CGGAATGCTCTGCCGGAACATTCTTCAGACGGCGGCTCATCGGATTGCAGATAACGGTGCAGAGTCCTCTTCCGGAGGGAAAATCAACGTTCATATCAAAAAGGGGATCG
GATCCAGACCTAGAGTAATTCCCGGCCGTCGTACACCGACGGTGAAGCGAATTCCCGGCCGTCGTACATCGGCGGCGAATCGGAGCCGAGTAGCATTCTTCGGCGTCGGA
TCACTGTGTATCTGCATTTTTTTCGGATTGTTCGTG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCATTAAAGCCCTAGTTCCGTTACTTCTTCTCGCTCTTCTCTTGTTCTCTGAATCCCTAGCCACTTCCGCCGCCGCTCACGGCGAGCCTTGGAATTCGCCCTC
CGGAATGCTCTGCCGGAACATTCTTCAGACGGCGGCTCATCGGATTGCAGATAACGGTGCAGAGTCCTCTTCCGGAGGGAAAATCAACGTTCATATCAAAAAGGGGATCG
GATCCAGACCTAGAGTAATTCCCGGCCGTCGTACACCGACGGTGAAGCGAATTCCCGGCCGTCGTACATCGGCGGCGAATCGGAGCCGAGTAGCATTCTTCGGCGTCGGA
TCACTGTGTATCTGCATTTTTTTCGGATTGTTCGTG
Protein sequenceShow/hide protein sequence
MAAIKALVPLLLLALLLFSESLATSAAAHGEPWNSPSGMLCRNILQTAAHRIADNGAESSSGGKINVHIKKGIGSRPRVIPGRRTPTVKRIPGRRTSAANRSRVAFFGVG
SLCICIFFGLFV