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MS013746 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013746
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein no-on-transient A-like
Genome locationscaffold263:643502..643843
RNA-Seq ExpressionMS013746
SyntenyMS013746
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046715.1 E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa]1.7e-0645.22Show/hide
Query:  LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTADHRIADNGAESSSEGKIN-VHIRKGIRARPIGIPGRRTPAANPIPVHPILIPGHCKSAANRSRAAS
        LL FSE L +        S+S TG   RNIL T  HRI +   ESS + K N +H +   R RPI I G     +N +         H KSA NRSR AS
Subjt:  LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTADHRIADNGAESSSEGKIN-VHIRKGIRARPIGIPGRRTPAANPIPVHPILIPGHCKSAANRSRAAS

Query:  FGVGSVLCFSICIFL
        F VGS+LC  ICIFL
Subjt:  FGVGSVLCFSICIFL

KAA0068047.1 protein no-on-transient A-like [Cucumis melo var. makuwa]4.0e-1149.55Show/hide
Query:  LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTADHRIADNGAESSSEGKINVHIRK--GIRARPIGIPGRRTPAANPIPVHPILIPGHCKSAANRSRAA
        LL FSE L++SAA    ASNS TG LRRN+LQTA H IAD      SEGK+NVHI++  G R RP+      T              G+ KSAA+RS+ A
Subjt:  LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTADHRIADNGAESSSEGKINVHIRK--GIRARPIGIPGRRTPAANPIPVHPILIPGHCKSAANRSRAA

Query:  SFGVGSVLCFS
        SFG+G +L FS
Subjt:  SFGVGSVLCFS

KAG6575859.1 hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia]5.5e-1351.89Show/hide
Query:  LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTADHRIADNGAESSSEGKINVHIRKGIRARPIGIPGRRTPAANPIPVHPILIPGHCKSAANRSRAASF
        LLLFSE L +SA      SNS TG LRRN+LQTA H+IADN  ESS E K+NVHI++  R RP+                     G   SAANRSR AS 
Subjt:  LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTADHRIADNGAESSSEGKINVHIRKGIRARPIGIPGRRTPAANPIPVHPILIPGHCKSAANRSRAASF

Query:  GVGSVL
        GVGSVL
Subjt:  GVGSVL

KAG6593163.1 hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia]2.0e-0743.48Show/hide
Query:  LLLFSEPLASSAAAHGEASNSPTGTLRRNILQ-TADHRIADNGAESSSEGKINVHIRKGIRARPIGIPGRRTPAANPIPVHPILIPGHCKSAANRSRAAS
        LLLF E L +SAA H  AS S  G LRRNI+Q TADH          +E K NVHI++ +R RP+ I   +T                  SAANRSR A 
Subjt:  LLLFSEPLASSAAAHGEASNSPTGTLRRNILQ-TADHRIADNGAESSSEGKINVHIRKGIRARPIGIPGRRTPAANPIPVHPILIPGHCKSAANRSRAAS

Query:  FGVGSVLCFSICIFL
         GVGS+LC  + + L
Subjt:  FGVGSVLCFSICIFL

KGN44886.1 hypothetical protein Csa_015765 [Cucumis sativus]1.3e-0951.82Show/hide
Query:  LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTADHRIADNGAESSSEGKINVHIRKG--IRARPIGIPGRRTPAANPIPVHPILIPGHCKSAANRSRAA
        LL FSE L++SAA    ASNS T  LRRNILQTA H IAD      SEGK+NV I+KG   R RPIG  G  T              G   SAANRSR  
Subjt:  LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTADHRIADNGAESSSEGKINVHIRKG--IRARPIGIPGRRTPAANPIPVHPILIPGHCKSAANRSRAA

Query:  SFGVGSVLCF
        SFG+G +L F
Subjt:  SFGVGSVLCF

TrEMBL top hitse value%identityAlignment
A0A0A0KAQ7 Uncharacterized protein6.2e-1051.82Show/hide
Query:  LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTADHRIADNGAESSSEGKINVHIRKG--IRARPIGIPGRRTPAANPIPVHPILIPGHCKSAANRSRAA
        LL FSE L++SAA    ASNS T  LRRNILQTA H IAD      SEGK+NV I+KG   R RPIG  G  T              G   SAANRSR  
Subjt:  LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTADHRIADNGAESSSEGKINVHIRKG--IRARPIGIPGRRTPAANPIPVHPILIPGHCKSAANRSRAA

Query:  SFGVGSVLCF
        SFG+G +L F
Subjt:  SFGVGSVLCF

A0A5A7VLE5 Protein no-on-transient A-like1.9e-1149.55Show/hide
Query:  LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTADHRIADNGAESSSEGKINVHIRK--GIRARPIGIPGRRTPAANPIPVHPILIPGHCKSAANRSRAA
        LL FSE L++SAA    ASNS TG LRRN+LQTA H IAD      SEGK+NVHI++  G R RP+      T              G+ KSAA+RS+ A
Subjt:  LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTADHRIADNGAESSSEGKINVHIRK--GIRARPIGIPGRRTPAANPIPVHPILIPGHCKSAANRSRAA

Query:  SFGVGSVLCFS
        SFG+G +L FS
Subjt:  SFGVGSVLCFS

A0A5D3D3Y6 E3 ubiquitin-protein ligase MIEL1-like8.3e-0745.22Show/hide
Query:  LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTADHRIADNGAESSSEGKIN-VHIRKGIRARPIGIPGRRTPAANPIPVHPILIPGHCKSAANRSRAAS
        LL FSE L +        S+S TG   RNIL T  HRI +   ESS + K N +H +   R RPI I G     +N +         H KSA NRSR AS
Subjt:  LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTADHRIADNGAESSSEGKIN-VHIRKGIRARPIGIPGRRTPAANPIPVHPILIPGHCKSAANRSRAAS

Query:  FGVGSVLCFSICIFL
        F VGS+LC  ICIFL
Subjt:  FGVGSVLCFSICIFL

A0A6J1GRX2 uncharacterized protein LOC1114564668.6e-0439.09Show/hide
Query:  LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTAD-HRIADNGA--ESSSEGKINVHIRKGIRARPIGIPGRRTPAANPIPVHPILIPGHCKSAANRSRA
        LLL SE L  SAA HG A +      RR+ LQTA+ H++A+NG   + S E KI    R+ +R            A  P P           S+AN S+ 
Subjt:  LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTAD-HRIADNGA--ESSSEGKINVHIRKGIRARPIGIPGRRTPAANPIPVHPILIPGHCKSAANRSRA

Query:  ASFGVGSVLC
        +SFGVGS+LC
Subjt:  ASFGVGSVLC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTGCTCTTGTTCTCTGAGCCGCTAGCCAGTTCCGCCGCCGCTCACGGCGAGGCTTCGAATTCCCCTACAGGAACGCTCCGCCGGAACATTCTTCAGACGGCGGATCATCG
GATTGCAGATAACGGTGCTGAGTCCTCTTCCGAAGGGAAAATCAATGTTCATATCAGAAAGGGGATCCGAGCCCGACCTATAGGAATTCCCGGCCGTCGTACACCGGCGG
CGAATCCAATTCCCGTCCATCCTATTCTAATTCCCGGCCATTGTAAATCGGCGGCGAACCGGAGCCGAGCTGCGTCATTTGGCGTTGGATCTGTGCTGTGTTTCTCTATC
TGCATTTTCTTG
mRNA sequenceShow/hide mRNA sequence
CTGCTCTTGTTCTCTGAGCCGCTAGCCAGTTCCGCCGCCGCTCACGGCGAGGCTTCGAATTCCCCTACAGGAACGCTCCGCCGGAACATTCTTCAGACGGCGGATCATCG
GATTGCAGATAACGGTGCTGAGTCCTCTTCCGAAGGGAAAATCAATGTTCATATCAGAAAGGGGATCCGAGCCCGACCTATAGGAATTCCCGGCCGTCGTACACCGGCGG
CGAATCCAATTCCCGTCCATCCTATTCTAATTCCCGGCCATTGTAAATCGGCGGCGAACCGGAGCCGAGCTGCGTCATTTGGCGTTGGATCTGTGCTGTGTTTCTCTATC
TGCATTTTCTTG
Protein sequenceShow/hide protein sequence
LLLFSEPLASSAAAHGEASNSPTGTLRRNILQTADHRIADNGAESSSEGKINVHIRKGIRARPIGIPGRRTPAANPIPVHPILIPGHCKSAANRSRAASFGVGSVLCFSI
CIFL