; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013751 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013751
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionrRNA-processing protein like
Genome locationscaffold263:661609..663111
RNA-Seq ExpressionMS013751
SyntenyMS013751
Gene Ontology termsNA
InterPro domainsIPR013730 - Fyv7/TAP26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593160.1 hypothetical protein SDJN03_12636, partial [Cucurbita argyrosperma subsp. sororia]9.7e-7181.77Show/hide
Query:  MKKRTGND-EQNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVKQQNQQNEKSSSSTVGLVQGEDEA
        MK R G D EQ   K KF+K  NK KNMKRLGGKG S +AFANAKS++DYYNPALIKKQREFYKNAKHV KYKKLVK QN QNE+ SSS+VGLV+GE+E 
Subjt:  MKKRTGND-EQNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVKQQNQQNEKSSSSTVGLVQGEDEA

Query:  QYKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGASTNH
         ++N TNGR G ERNKGVPSLQGLYERKHQEKEKARMEKEA IAAKKEERERAKARRNSTREK+FKRTQKGQPVMKYRIEHLLETIGAS NH
Subjt:  QYKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGASTNH

XP_004136058.2 uncharacterized protein LOC101216293 [Cucumis sativus]4.4e-7180.1Show/hide
Query:  MKKRTGNDEQNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVKQQNQQNEKSSSSTVGLVQGEDEAQ
        MK   G  E N        N NK  N+KRLGGKGLSLEAFANAKS++DYYNPALIKKQREFYKNAKHV KYKKLVK QNQ NE+ SSSTV LV+GE+E +
Subjt:  MKKRTGNDEQNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVKQQNQQNEKSSSSTVGLVQGEDEAQ

Query:  YKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGASTNH
        ++N TN RCGKERNKGVPSLQ LYERKH+EKEKARMEKEA IAAKKEERERAKARRNSTREK+FKRTQKGQPVMKYRIEHLLETIGASTNH
Subjt:  YKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGASTNH

XP_008451439.1 PREDICTED: uncharacterized protein LOC103492733 [Cucumis melo]1.4e-7282.29Show/hide
Query:  MKKRTGNDE-QNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVKQQNQQNEKSSSSTVGLVQGEDEA
        MK   G  E +N  K KF+ N NK  N+KRLGGK LSLEAFANAKS++DYYNPALIKKQREFYKNAKHV KYKKLVK QNQQNE+ SSSTVGLV+GE+E 
Subjt:  MKKRTGNDE-QNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVKQQNQQNEKSSSSTVGLVQGEDEA

Query:  QYKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGASTNH
        +++N TNGRCGKERNKGVPSLQ LYERKH+EKEKARMEKEA IAAKKEERERAKARRNSTREK+FKRTQKGQPVMKYRIEHLLETIGASTNH
Subjt:  QYKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGASTNH

XP_022150141.1 uncharacterized protein LOC111018394 [Momordica charantia]1.3e-9499.48Show/hide
Query:  MKKRTGNDEQNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVKQQNQQNEKSSSSTVGLVQGEDEAQ
        MKKRTGNDEQNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVK+QNQQNEKSSSSTVGLVQGEDEAQ
Subjt:  MKKRTGNDEQNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVKQQNQQNEKSSSSTVGLVQGEDEAQ

Query:  YKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGASTNH
        YKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGASTNH
Subjt:  YKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGASTNH

XP_022960530.1 uncharacterized protein LOC111461241 [Cucurbita moschata]9.7e-7181.77Show/hide
Query:  MKKRTGND-EQNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVKQQNQQNEKSSSSTVGLVQGEDEA
        MK R G D EQ   K KF+K  NK KNMKRLGGKG S +AFANAKS++DYYNPALIKKQREFYKNAKHV KYKKLVK QN QNE+ SSS+VGLV+GE+E 
Subjt:  MKKRTGND-EQNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVKQQNQQNEKSSSSTVGLVQGEDEA

Query:  QYKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGASTNH
        +++N TNGR G ERNKGVPSLQGLYERKHQEKEKARMEKEA IAAKKEERERAKARRNSTREK+FKRTQKGQPVMKYRIEHLLETIGAS NH
Subjt:  QYKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGASTNH

TrEMBL top hitse value%identityAlignment
A0A0A0K7L3 Uncharacterized protein2.1e-7180.1Show/hide
Query:  MKKRTGNDEQNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVKQQNQQNEKSSSSTVGLVQGEDEAQ
        MK   G  E N        N NK  N+KRLGGKGLSLEAFANAKS++DYYNPALIKKQREFYKNAKHV KYKKLVK QNQ NE+ SSSTV LV+GE+E +
Subjt:  MKKRTGNDEQNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVKQQNQQNEKSSSSTVGLVQGEDEAQ

Query:  YKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGASTNH
        ++N TN RCGKERNKGVPSLQ LYERKH+EKEKARMEKEA IAAKKEERERAKARRNSTREK+FKRTQKGQPVMKYRIEHLLETIGASTNH
Subjt:  YKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGASTNH

A0A1S3BRH3 uncharacterized protein LOC1034927336.6e-7382.29Show/hide
Query:  MKKRTGNDE-QNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVKQQNQQNEKSSSSTVGLVQGEDEA
        MK   G  E +N  K KF+ N NK  N+KRLGGK LSLEAFANAKS++DYYNPALIKKQREFYKNAKHV KYKKLVK QNQQNE+ SSSTVGLV+GE+E 
Subjt:  MKKRTGNDE-QNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVKQQNQQNEKSSSSTVGLVQGEDEA

Query:  QYKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGASTNH
        +++N TNGRCGKERNKGVPSLQ LYERKH+EKEKARMEKEA IAAKKEERERAKARRNSTREK+FKRTQKGQPVMKYRIEHLLETIGASTNH
Subjt:  QYKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGASTNH

A0A6J1DAK5 uncharacterized protein LOC1110183946.1e-9599.48Show/hide
Query:  MKKRTGNDEQNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVKQQNQQNEKSSSSTVGLVQGEDEAQ
        MKKRTGNDEQNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVK+QNQQNEKSSSSTVGLVQGEDEAQ
Subjt:  MKKRTGNDEQNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVKQQNQQNEKSSSSTVGLVQGEDEAQ

Query:  YKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGASTNH
        YKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGASTNH
Subjt:  YKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGASTNH

A0A6J1H9B9 uncharacterized protein LOC1114612414.7e-7181.77Show/hide
Query:  MKKRTGND-EQNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVKQQNQQNEKSSSSTVGLVQGEDEA
        MK R G D EQ   K KF+K  NK KNMKRLGGKG S +AFANAKS++DYYNPALIKKQREFYKNAKHV KYKKLVK QN QNE+ SSS+VGLV+GE+E 
Subjt:  MKKRTGND-EQNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVKQQNQQNEKSSSSTVGLVQGEDEA

Query:  QYKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGASTNH
        +++N TNGR G ERNKGVPSLQGLYERKHQEKEKARMEKEA IAAKKEERERAKARRNSTREK+FKRTQKGQPVMKYRIEHLLETIGAS NH
Subjt:  QYKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGASTNH

A0A6J1KV89 uncharacterized protein LOC1114978958.0e-7181.25Show/hide
Query:  MKKRTGND-EQNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVKQQNQQNEKSSSSTVGLVQGEDEA
        MK R G D EQ   K KF K  NK KNMKRLGGKG S +AFANAKS++DYYNPA IKKQREFYKNAKHV KYKKLVK QN QNE+ S+STVGLV+GE+E 
Subjt:  MKKRTGND-EQNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVKQQNQQNEKSSSSTVGLVQGEDEA

Query:  QYKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGASTNH
        +++N TNGR G ERNKGVPSLQGLYERKHQEKEKARMEKEA IAAKKEERERAKARRNSTREK+FKRTQKGQPVMKYRIEHLLETIGAS NH
Subjt:  QYKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGASTNH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G03180.1 CONTAINS InterPro DOMAIN/s: rRNA processing (InterPro:IPR013730); Has 898 Blast hits to 687 proteins in 142 species: Archae - 2; Bacteria - 28; Metazoa - 200; Fungi - 99; Plants - 63; Viruses - 0; Other Eukaryotes - 506 (source: NCBI BLink).9.5e-3247.37Show/hide
Query:  MKKRTGNDEQNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVKQQN--QQNEKSSSSTVGLVQGEDE
        MKK   N +    K K  + K K KNM+RLGG GLSL+ FAN KS ++ YNP+LIKKQ+EFYKNAK+V K++K +KQQN   +NE   +S VG    +D+
Subjt:  MKKRTGNDEQNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVKQQN--QQNEKSSSSTVGLVQGEDE

Query:  AQYKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGAS
         + K  +N R G         ++ LY++  +E E+ R E+EA   AKKE +E A++RR   + K+ ++T+ GQPVMKYRIEHLLE+I  S
Subjt:  AQYKNHTNGRCGKERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGCGCACTGGAAACGACGAACAGAATGGTCCGAAACCAAAATTTGTGAAGAACAAGAACAAGATCAAGAACATGAAACGGTTGGGTGGGAAGGGCCTTTCGCT
AGAGGCGTTTGCGAATGCGAAATCGAGTAGCGATTACTATAATCCAGCTTTGATAAAAAAGCAAAGAGAGTTCTATAAGAATGCTAAACATGTTGGCAAGTACAAGAAGT
TAGTAAAGCAACAGAATCAGCAGAATGAGAAGTCCTCTAGCTCAACTGTTGGACTTGTCCAGGGTGAAGACGAAGCTCAGTACAAGAATCATACGAATGGAAGATGTGGG
AAAGAAAGGAATAAAGGCGTACCTAGTCTTCAGGGGCTGTATGAGAGGAAGCATCAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCTAATATTGCAGCAAAAAAGGA
AGAACGAGAAAGGGCTAAAGCTAGACGAAACTCCACGAGGGAGAAATTGTTCAAAAGGACACAAAAAGGTCAGCCAGTTATGAAGTACCGGATCGAGCATCTTTTGGAGA
CTATTGGAGCCTCAACGAACCAC
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGCGCACTGGAAACGACGAACAGAATGGTCCGAAACCAAAATTTGTGAAGAACAAGAACAAGATCAAGAACATGAAACGGTTGGGTGGGAAGGGCCTTTCGCT
AGAGGCGTTTGCGAATGCGAAATCGAGTAGCGATTACTATAATCCAGCTTTGATAAAAAAGCAAAGAGAGTTCTATAAGAATGCTAAACATGTTGGCAAGTACAAGAAGT
TAGTAAAGCAACAGAATCAGCAGAATGAGAAGTCCTCTAGCTCAACTGTTGGACTTGTCCAGGGTGAAGACGAAGCTCAGTACAAGAATCATACGAATGGAAGATGTGGG
AAAGAAAGGAATAAAGGCGTACCTAGTCTTCAGGGGCTGTATGAGAGGAAGCATCAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCTAATATTGCAGCAAAAAAGGA
AGAACGAGAAAGGGCTAAAGCTAGACGAAACTCCACGAGGGAGAAATTGTTCAAAAGGACACAAAAAGGTCAGCCAGTTATGAAGTACCGGATCGAGCATCTTTTGGAGA
CTATTGGAGCCTCAACGAACCAC
Protein sequenceShow/hide protein sequence
MKKRTGNDEQNGPKPKFVKNKNKIKNMKRLGGKGLSLEAFANAKSSSDYYNPALIKKQREFYKNAKHVGKYKKLVKQQNQQNEKSSSSTVGLVQGEDEAQYKNHTNGRCG
KERNKGVPSLQGLYERKHQEKEKARMEKEANIAAKKEERERAKARRNSTREKLFKRTQKGQPVMKYRIEHLLETIGASTNH