CuGenDBv2

Gene ID	MS013760
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Auxin response factor
Genome location	scaffold263:752996..755246
RNA-Seq Expression	MS013760
Synteny	MS013760
Gene Ontology terms	GO:0003855 - 3-dehydroquinate dehydratase activity (molecular function) GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008451429.1 PREDICTED: uncharacterized protein LOC103492727 [Cucumis melo]

5.1e-77

81.32

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Query:  MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRSYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEW
        MESLILIP S+HVS++NSS F   F   F++ KRAINF   CPQ LH NG  HAQTT RSY R GPPYGEEDDDPE++VESLRVPD+WSVP+KALEESEW
Subjt:  MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRSYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEW

Query:  LRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFSSANAAVNLIAQKIELS
        LRVTLHKWLDDEYCPEETNVEIS+VAANSYYNSLL+K TDLG+ILL MARELESISYKESFHGAFSSANAAVNLIAQ+IELS
Subjt:  LRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFSSANAAVNLIAQKIELS

XP_022150155.1 uncharacterized protein LOC111018405 [Momordica charantia]

6.2e-99

99.45

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Query:  MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRSYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEW
        MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRSYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEW
Subjt:  MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRSYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEW

Query:  LRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFSSANAAVNLIAQKIELS
        LRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAF SANAAVNLIAQKIELS
Subjt:  LRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFSSANAAVNLIAQKIELS

XP_022959936.1 uncharacterized protein LOC111460840 [Cucurbita moschata]

4.3e-76

81.32

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Query:  MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRSYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEW
        MESLIL+P+SRHVS++NSS F SDF V FT+ KRA+NFRAS PQIL  N +   + TPRSY RYGPPYG++DDDPE QVESLRVPD WSVP+KALEESEW
Subjt:  MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRSYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEW

Query:  LRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFSSANAAVNLIAQKIELS
        LRVTLHKWLD+EYCPEETNVEIS+VAA SYYNSLLEKRT+L DILL MARELESISYKESFHGAFSSANAAVNLIAQ+IELS
Subjt:  LRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFSSANAAVNLIAQKIELS

XP_023515033.1 uncharacterized protein LOC111779179 [Cucurbita pepo subsp. pepo]

4.3e-76

81.32

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Query:  MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRSYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEW
        MESLIL+P+SRHVS++NSS F SDF V FT+ KRA+NFRAS PQIL  N +   + TPRSY RYGPPYG++DDDPE QVESLRVPD WSVP+KALEESEW
Subjt:  MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRSYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEW

Query:  LRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFSSANAAVNLIAQKIELS
        LRVTLHKWLD+EYCPEETNVEIS+VAA SYYNSLLEKRT+L DILL MARELESISYKESFHGAFSSANAAVNLIAQ+IELS
Subjt:  LRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFSSANAAVNLIAQKIELS

XP_038896861.1 uncharacterized protein LOC120085084 [Benincasa hispida]

4.3e-84

85.71

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Query:  MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRSYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEW
        MESLILIPAS+HV ++NSS FCS F +PFT+ KRAINF+  CPQILH NG+RHAQ TPRSY   GPPYGEEDDDPE+QVESLRVPDDWSVP+KALEESEW
Subjt:  MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRSYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEW

Query:  LRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFSSANAAVNLIAQKIELS
        LR TLHKWLDDEYCPEETNVEIS+VAANSYYNSLL+KRTDLGDILL MARELESISYKESFHGAFSSANAAVNLIAQ+IELS
Subjt:  LRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFSSANAAVNLIAQKIELS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BS97 uncharacterized protein LOC103492727

2.5e-77

81.32

Show/hide

Query:  MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRSYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEW
        MESLILIP S+HVS++NSS F   F   F++ KRAINF   CPQ LH NG  HAQTT RSY R GPPYGEEDDDPE++VESLRVPD+WSVP+KALEESEW
Subjt:  MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRSYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEW

Query:  LRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFSSANAAVNLIAQKIELS
        LRVTLHKWLDDEYCPEETNVEIS+VAANSYYNSLL+K TDLG+ILL MARELESISYKESFHGAFSSANAAVNLIAQ+IELS
Subjt:  LRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFSSANAAVNLIAQKIELS

A0A5D3D403 Uncharacterized protein

2.5e-77

81.32

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Query:  MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRSYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEW
        MESLILIP S+HVS++NSS F   F   F++ KRAINF   CPQ LH NG  HAQTT RSY R GPPYGEEDDDPE++VESLRVPD+WSVP+KALEESEW
Subjt:  MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRSYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEW

Query:  LRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFSSANAAVNLIAQKIELS
        LRVTLHKWLDDEYCPEETNVEIS+VAANSYYNSLL+K TDLG+ILL MARELESISYKESFHGAFSSANAAVNLIAQ+IELS
Subjt:  LRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFSSANAAVNLIAQKIELS

A0A6J1D9Y8 uncharacterized protein LOC111018405

3.0e-99

99.45

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Query:  MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRSYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEW
        MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRSYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEW
Subjt:  MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRSYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEW

Query:  LRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFSSANAAVNLIAQKIELS
        LRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAF SANAAVNLIAQKIELS
Subjt:  LRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFSSANAAVNLIAQKIELS

A0A6J1H695 uncharacterized protein LOC111460840

2.1e-76

81.32

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Query:  MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRSYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEW
        MESLIL+P+SRHVS++NSS F SDF V FT+ KRA+NFRAS PQIL  N +   + TPRSY RYGPPYG++DDDPE QVESLRVPD WSVP+KALEESEW
Subjt:  MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRSYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEW

Query:  LRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFSSANAAVNLIAQKIELS
        LRVTLHKWLD+EYCPEETNVEIS+VAA SYYNSLLEKRT+L DILL MARELESISYKESFHGAFSSANAAVNLIAQ+IELS
Subjt:  LRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFSSANAAVNLIAQKIELS

A0A6J1KR31 uncharacterized protein LOC111497897

7.9e-76

80.77

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Query:  MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRSYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEW
        MESLIL+P+SRHVS++NSS F SDF V FT+ KR +NFRAS PQIL  N +   + TPRSY RYGPPYG++DDDPE QVESLRVPD WSVP+KALEESEW
Subjt:  MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRSYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEW

Query:  LRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFSSANAAVNLIAQKIELS
        LRVTLHKWLD+EYCPEETNVEIS+VAA SYYNSLLEKRT+L DILL MARELESISYKESFHGAFSSANAAVNLIAQ+IELS
Subjt:  LRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFSSANAAVNLIAQKIELS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G03150.1 unknown protein

6.7e-43

49.72

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Query:  MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPR-SYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESE
        M S +    +R+V  S+          P T  +R+++F A+  +      I  A   P     +      E ++D E  V++L +P++W +P++A+EESE
Subjt:  MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPR-SYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESE

Query:  WLRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFSSANAAVNLIAQKIE
        WLRVTLHKWLDDEYCPE TNVEIS VAA SYY+SLLEK +D+G+ILLKMA++L SISY+ESFHGAF+SANAA+NLI  +IE
Subjt:  WLRVTLHKWLDDEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFSSANAAVNLIAQKIE

Sequences

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CDS sequence

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ATGGAGTCTCTGATTTTGATTCCAGCAAGCAGACACGTTTCAGTCTCAAATTCTTCTGGATTTTGCTCCGACTTCTACGTTCCTTTTACTACTGGAAAGCGCGCCATCAA
CTTCCGAGCATCTTGTCCGCAGATTCTCCATTGGAATGGCATTCGACATGCGCAAACTACTCCAAGGTCTTATACTCGATACGGTCCGCCGTATGGTGAGGAAGATGATG
ATCCTGAAGTTCAGGTTGAAAGCCTCAGAGTTCCTGATGATTGGTCGGTCCCTACCAAGGCATTGGAGGAATCAGAATGGCTTAGGGTTACCCTGCACAAATGGTTAGAT
GATGAGTACTGTCCAGAGGAAACTAATGTAGAGATAAGCAGAGTTGCTGCAAATTCGTACTACAATTCTTTGTTAGAGAAGAGGACAGACCTAGGCGATATTTTGTTGAA
AATGGCCAGAGAATTGGAATCTATTTCCTATAAAGAAAGCTTTCATGGTGCATTCTCTTCTGCCAATGCAGCAGTGAACTTAATTGCTCAAAAAATAGAGTTGTCT

mRNA sequence

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Protein sequence

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MESLILIPASRHVSVSNSSGFCSDFYVPFTTGKRAINFRASCPQILHWNGIRHAQTTPRSYTRYGPPYGEEDDDPEVQVESLRVPDDWSVPTKALEESEWLRVTLHKWLD
DEYCPEETNVEISRVAANSYYNSLLEKRTDLGDILLKMARELESISYKESFHGAFSSANAAVNLIAQKIELS

MS013760 (gene) of Bitter gourd (TR) v1 genome