; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013787 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013787
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold263:1044730..1045401
RNA-Seq ExpressionMS013787
SyntenyMS013787
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057596.1 hypothetical protein E6C27_scaffold497G00730 [Cucumis melo var. makuwa]2.8e-2434.85Show/hide
Query:  MAANEGVYSVAIDMAEGLVQIGGKDNLDPSILIKTVAIAGKRAHLQSVEKT-----------------------TAAAAAAVDSGQ----PSNPSGNATD
        MA+NEGV SV +++  GLV+I G+ N DPSI +KT+A  GK+A   + E +                       T+A AA  D+       +  S N+ +
Subjt:  MAANEGVYSVAIDMAEGLVQIGGKDNLDPSILIKTVAIAGKRAHLQSVEKT-----------------------TAAAAAAVDSGQ----PSNPSGNATD

Query:  ESCNNTGRSQNGNSGSGHFSDRGGRYGQIHINEAAAVKP-------------PPRNWPFMRPPLQFGGVGFGGSRGLRPLLPPPMVPMPPPVPPLGYYRW
          C +   +  GNS +G+FSD   R  ++HINEAAAV P             PP + P + PP Q+G + F GS G  P +  P     PP PP+     
Subjt:  ESCNNTGRSQNGNSGSGHFSDRGGRYGQIHINEAAAVKP-------------PPRNWPFMRPPLQFGGVGFGGSRGLRPLLPPPMVPMPPPVPPLGYYRW

Query:  SELPPHGYNQPEPPPEVPPAYGYCWLPEPPPEAPSCWQQHPPPIVNAPEHYLFSDENIEGCTVV
        +  PPH Y              Y W PEP    P   Q+  PP+ N P HYLF+DEN EGC ++
Subjt:  SELPPHGYNQPEPPPEVPPAYGYCWLPEPPPEAPSCWQQHPPPIVNAPEHYLFSDENIEGCTVV

KAG6593135.1 hypothetical protein SDJN03_12611, partial [Cucurbita argyrosperma subsp. sororia]3.4e-2239.15Show/hide
Query:  MAANEGVYSVAIDMAEGLVQIGGKDNLDPSILIKTVAIAGKRAHLQSV---EKTTAAAAAAVDSGQPSNPSGNATDESCNNTGRSQNGNSGSGHFSDRGG
        MAANE V SVAID+ +GLV I      DP  +++ ++  GK A LQ +       AA+AA  DS  P+ PS  A+D  CN    +QN   GS        
Subjt:  MAANEGVYSVAIDMAEGLVQIGGKDNLDPSILIKTVAIAGKRAHLQSV---EKTTAAAAAAVDSGQPSNPSGNATDESCNNTGRSQNGNSGSGHFSDRGG

Query:  RYGQIHINEAAAVKPPP----RNWPFMRPPLQFGGVGFGGSRGL-RPLLPPPMVPMPPPVPPLGYYRWSELPPHGYNQPEPPPEVPPAYGYCWLPEPPPE
           ++H NEAA   PP     R+   +RP  QFGGVG   SRG  RP++ P   P+PP +P                 P  PP +PP  GY    EPP  
Subjt:  RYGQIHINEAAAVKPPP----RNWPFMRPPLQFGGVGFGGSRGL-RPLLPPPMVPMPPPVPPLGYYRWSELPPHGYNQPEPPPEVPPAYGYCWLPEPPPE

Query:  APSCWQQHPPP---IVNAPEHYLFSDENIEGCTVV
         P  WQQ PPP   +  AP HYLF+DEN++ C ++
Subjt:  APSCWQQHPPP---IVNAPEHYLFSDENIEGCTVV

KGN45423.2 hypothetical protein Csa_015802, partial [Cucumis sativus]2.1e-0834.21Show/hide
Query:  EKTTAAAAAAVDSGQPSNPSGNATDES----CNNTGRSQNGNSGSGHFSDRGGRYGQIHINEAAAVKPPP----RNWPFMRPPL---------QFGG-VG
        E  T+A A A  +    N SG+    S     NN     +GNS +G+FSD      ++HINEAA+V PP      N   MRPP+         Q+G  +G
Subjt:  EKTTAAAAAAVDSGQPSNPSGNATDES----CNNTGRSQNGNSGSGHFSDRGGRYGQIHINEAAAVKPPP----RNWPFMRPPL---------QFGG-VG

Query:  FGGSRGLRPLLPPPMVPMPPPVPPLGYYRWSELPPHGYNQPEPPPEVPPAYGYCWLPEPPPEAPSCWQQHPPPIVNAPEHYLFSDENIEG
        F GS G  P +  P      P PP  YYRW                          PEP    P   Q+  PP+ N P HY+F+DEN EG
Subjt:  FGGSRGLRPLLPPPMVPMPPPVPPLGYYRWSELPPHGYNQPEPPPEVPPAYGYCWLPEPPPEAPSCWQQHPPPIVNAPEHYLFSDENIEG

TYK20998.1 hypothetical protein E5676_scaffold328G00250 [Cucumis melo var. makuwa]1.7e-1335.26Show/hide
Query:  TAAAAAAVDSGQ----PSNPSGNATDESCNNTGRSQNGNSGSGHFSDRGGRYGQIHINEAAAVKP-------------PPRNWPFMRPPLQFGGVGFGGS
        T+A AA  D+       +  S N+ +  C +   +  GNS +G+FSD   R  ++HINEAAAV P             PP + P + PP Q+G + F GS
Subjt:  TAAAAAAVDSGQ----PSNPSGNATDESCNNTGRSQNGNSGSGHFSDRGGRYGQIHINEAAAVKP-------------PPRNWPFMRPPLQFGGVGFGGS

Query:  RGLRPLLPPPMVPMPPPVPPLGYYRWSELPPHGYNQPEPPPEVPPAYGYCWLPEPPPEAPSCWQQHPPPIVNAPEHYLFSDENIEGCTVV
         G  P +  P     PP PP+     +  PPH Y              Y W PEP    P   Q+  PP+ N P HYLF+DEN EGC ++
Subjt:  RGLRPLLPPPMVPMPPPVPPLGYYRWSELPPHGYNQPEPPPEVPPAYGYCWLPEPPPEAPSCWQQHPPPIVNAPEHYLFSDENIEGCTVV

TrEMBL top hitse value%identityAlignment
A0A0A0K5U2 Uncharacterized protein8.9e-2134.62Show/hide
Query:  MAANEGVYSVAIDMAEGLVQIGGKDNLDPSILIKTVAIAGKRAHLQSVEKT------------------TAAAAAAVDSGQPSNPSGNATDES----CNN
        MA+NEGV SV +++  GLV+I G+ N DP I +KT+  AGK+A   +++ T                  T+A A A  +    N SG+    S     NN
Subjt:  MAANEGVYSVAIDMAEGLVQIGGKDNLDPSILIKTVAIAGKRAHLQSVEKT------------------TAAAAAAVDSGQPSNPSGNATDES----CNN

Query:  TGRSQNGNSGSGHFSDRGGRYGQIHINEAAAVKPPP----RNWPFMRPPL---------QFGG-VGFGGSRGLRPLLPPPMVPMPPPVPPLGYYRWSELP
             +GNS +G+FSD      ++HINEAA+V PP      N   MRPP+         Q+G  +GF GS G  P +  P      P PP  YYRW    
Subjt:  TGRSQNGNSGSGHFSDRGGRYGQIHINEAAAVKPPP----RNWPFMRPPL---------QFGG-VGFGGSRGLRPLLPPPMVPMPPPVPPLGYYRWSELP

Query:  PHGYNQPEPPPEVPPAYGYCWLPEPPPEAPSCWQQHPPPIVNAPEHYLFSDENIEGCTVV
                              PEP    P   Q+  PP+ N P HY+F+DEN EGC +V
Subjt:  PHGYNQPEPPPEVPPAYGYCWLPEPPPEAPSCWQQHPPPIVNAPEHYLFSDENIEGCTVV

A0A5A7UTY4 Uncharacterized protein1.3e-2434.85Show/hide
Query:  MAANEGVYSVAIDMAEGLVQIGGKDNLDPSILIKTVAIAGKRAHLQSVEKT-----------------------TAAAAAAVDSGQ----PSNPSGNATD
        MA+NEGV SV +++  GLV+I G+ N DPSI +KT+A  GK+A   + E +                       T+A AA  D+       +  S N+ +
Subjt:  MAANEGVYSVAIDMAEGLVQIGGKDNLDPSILIKTVAIAGKRAHLQSVEKT-----------------------TAAAAAAVDSGQ----PSNPSGNATD

Query:  ESCNNTGRSQNGNSGSGHFSDRGGRYGQIHINEAAAVKP-------------PPRNWPFMRPPLQFGGVGFGGSRGLRPLLPPPMVPMPPPVPPLGYYRW
          C +   +  GNS +G+FSD   R  ++HINEAAAV P             PP + P + PP Q+G + F GS G  P +  P     PP PP+     
Subjt:  ESCNNTGRSQNGNSGSGHFSDRGGRYGQIHINEAAAVKP-------------PPRNWPFMRPPLQFGGVGFGGSRGLRPLLPPPMVPMPPPVPPLGYYRW

Query:  SELPPHGYNQPEPPPEVPPAYGYCWLPEPPPEAPSCWQQHPPPIVNAPEHYLFSDENIEGCTVV
        +  PPH Y              Y W PEP    P   Q+  PP+ N P HYLF+DEN EGC ++
Subjt:  SELPPHGYNQPEPPPEVPPAYGYCWLPEPPPEAPSCWQQHPPPIVNAPEHYLFSDENIEGCTVV

A0A5D3DBX5 Uncharacterized protein8.1e-1435.26Show/hide
Query:  TAAAAAAVDSGQ----PSNPSGNATDESCNNTGRSQNGNSGSGHFSDRGGRYGQIHINEAAAVKP-------------PPRNWPFMRPPLQFGGVGFGGS
        T+A AA  D+       +  S N+ +  C +   +  GNS +G+FSD   R  ++HINEAAAV P             PP + P + PP Q+G + F GS
Subjt:  TAAAAAAVDSGQ----PSNPSGNATDESCNNTGRSQNGNSGSGHFSDRGGRYGQIHINEAAAVKP-------------PPRNWPFMRPPLQFGGVGFGGS

Query:  RGLRPLLPPPMVPMPPPVPPLGYYRWSELPPHGYNQPEPPPEVPPAYGYCWLPEPPPEAPSCWQQHPPPIVNAPEHYLFSDENIEGCTVV
         G  P +  P     PP PP+     +  PPH Y              Y W PEP    P   Q+  PP+ N P HYLF+DEN EGC ++
Subjt:  RGLRPLLPPPMVPMPPPVPPLGYYRWSELPPHGYNQPEPPPEVPPAYGYCWLPEPPPEAPSCWQQHPPPIVNAPEHYLFSDENIEGCTVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCCAATGAAGGGGTGTATTCCGTCGCCATAGATATGGCAGAAGGATTAGTACAGATCGGTGGAAAAGACAATTTGGATCCATCAATTCTCATCAAAACTGTGGC
AATTGCCGGAAAAAGGGCACATCTTCAATCCGTCGAGAAGACGACCGCCGCCGCCGCCGCCGCCGTTGATTCCGGCCAACCAAGCAATCCTTCCGGCAATGCCACCGACG
AGTCCTGTAACAATACTGGCCGGTCCCAGAATGGCAATTCCGGCTCCGGCCATTTTTCCGACCGCGGTGGCCGGTACGGCCAGATTCACATCAACGAGGCGGCCGCCGTC
AAGCCGCCGCCCCGCAACTGGCCGTTTATGCGGCCGCCGTTGCAATTTGGAGGTGTGGGTTTTGGTGGGAGCCGTGGTCTCCGGCCTTTGCTGCCGCCGCCAATGGTACC
GATGCCACCGCCGGTGCCGCCACTCGGATACTATCGGTGGTCGGAGCTGCCGCCCCATGGATACAATCAACCGGAGCCACCGCCAGAGGTGCCGCCGGCGTACGGGTATT
GTTGGTTGCCGGAGCCACCACCTGAGGCGCCGTCGTGTTGGCAGCAGCATCCGCCACCGATAGTAAATGCGCCGGAGCACTACCTTTTCAGCGATGAGAATATTGAAGGA
TGTACAGTTGTT
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCCAATGAAGGGGTGTATTCCGTCGCCATAGATATGGCAGAAGGATTAGTACAGATCGGTGGAAAAGACAATTTGGATCCATCAATTCTCATCAAAACTGTGGC
AATTGCCGGAAAAAGGGCACATCTTCAATCCGTCGAGAAGACGACCGCCGCCGCCGCCGCCGCCGTTGATTCCGGCCAACCAAGCAATCCTTCCGGCAATGCCACCGACG
AGTCCTGTAACAATACTGGCCGGTCCCAGAATGGCAATTCCGGCTCCGGCCATTTTTCCGACCGCGGTGGCCGGTACGGCCAGATTCACATCAACGAGGCGGCCGCCGTC
AAGCCGCCGCCCCGCAACTGGCCGTTTATGCGGCCGCCGTTGCAATTTGGAGGTGTGGGTTTTGGTGGGAGCCGTGGTCTCCGGCCTTTGCTGCCGCCGCCAATGGTACC
GATGCCACCGCCGGTGCCGCCACTCGGATACTATCGGTGGTCGGAGCTGCCGCCCCATGGATACAATCAACCGGAGCCACCGCCAGAGGTGCCGCCGGCGTACGGGTATT
GTTGGTTGCCGGAGCCACCACCTGAGGCGCCGTCGTGTTGGCAGCAGCATCCGCCACCGATAGTAAATGCGCCGGAGCACTACCTTTTCAGCGATGAGAATATTGAAGGA
TGTACAGTTGTT
Protein sequenceShow/hide protein sequence
MAANEGVYSVAIDMAEGLVQIGGKDNLDPSILIKTVAIAGKRAHLQSVEKTTAAAAAAVDSGQPSNPSGNATDESCNNTGRSQNGNSGSGHFSDRGGRYGQIHINEAAAV
KPPPRNWPFMRPPLQFGGVGFGGSRGLRPLLPPPMVPMPPPVPPLGYYRWSELPPHGYNQPEPPPEVPPAYGYCWLPEPPPEAPSCWQQHPPPIVNAPEHYLFSDENIEG
CTVV