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MS013793 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013793
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationscaffold263:1092650..1092904
RNA-Seq ExpressionMS013793
SyntenyMS013793
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW78837.1 DNA polymerase delta catalytic subunit [Vitis vinifera]3.1e-0842.11Show/hide
Query:  WRFTQEGNPPWKRVITSIYGTENHGWLPQPPKGSSRGRPWVAIEQQRHSFMSFLSFKV---HRIKFWKDNWLGNMP
        WR+ +EG+  W +VI SIYG+ ++GW+       S   PW AI Q    F SF  F V    RI+FW+D W G+ P
Subjt:  WRFTQEGNPPWKRVITSIYGTENHGWLPQPPKGSSRGRPWVAIEQQRHSFMSFLSFKV---HRIKFWKDNWLGNMP

RVX07859.1 Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS2 [Vitis vinifera]4.7e-0940.74Show/hide
Query:  WRFTQEGNPPWKRVITSIYGTENHGWLPQPPKGSSRGRPWVAIEQQRHSFMSFLSFKV---HRIKFWKDNWLGNMPFEINF
        WRF  E NP WKRV+   YG E+ GW     +G    R W AI      F   + FKV   +R+KFW D W G++P    F
Subjt:  WRFTQEGNPPWKRVITSIYGTENHGWLPQPPKGSSRGRPWVAIEQQRHSFMSFLSFKV---HRIKFWKDNWLGNMPFEINF

XP_018504745.1 PREDICTED: uncharacterized protein LOC108867743 [Pyrus x bretschneideri]3.1e-0841.77Show/hide
Query:  WRFTQEGNPPWKRVITSIYGTENHGWLPQPP-KGSSRGRPWVAIEQQRHSFMSFLSFKV---HRIKFWKDNWLGNMPFE
        WRF +E N  W +VI S YG +++GW   PP +GSSR  PW  I     SF+    F+V    R++FW+D WL  +P +
Subjt:  WRFTQEGNPPWKRVITSIYGTENHGWLPQPP-KGSSRGRPWVAIEQQRHSFMSFLSFKV---HRIKFWKDNWLGNMPFE

XP_022158566.1 uncharacterized protein LOC111025019 [Momordica charantia]3.7e-1446.05Show/hide
Query:  WRFTQEGNPPWKRVITSIYGTENHGWLPQPPKGSSRGRPWVAIEQQRHSFMSFLSFKVH---RIKFWKDNWLGNMP
        W FT+E N  W+RVI SIYG + +GWL + PKG ++GRPW  I +   +F   + FK +   R+ FW D W GN+P
Subjt:  WRFTQEGNPPWKRVITSIYGTENHGWLPQPPKGSSRGRPWVAIEQQRHSFMSFLSFKVH---RIKFWKDNWLGNMP

XP_026438270.1 uncharacterized protein LOC113336811 [Papaver somniferum]3.1e-0838.27Show/hide
Query:  WRFTQEGNPPWKRVITSIYGTENHGWLPQPPKGSSRGRPWVAIEQQRHSFMSFLSFKV---HRIKFWKDNWLGNMPFEINF
        W F ++ NP WK +++  YG E HGW  + PK +     W  I+     F +   F V    RI+FWKD WLGN P    F
Subjt:  WRFTQEGNPPWKRVITSIYGTENHGWLPQPPKGSSRGRPWVAIEQQRHSFMSFLSFKV---HRIKFWKDNWLGNMPFEINF

TrEMBL top hitse value%identityAlignment
A0A2N9GT09 Uncharacterized protein5.6e-0835.8Show/hide
Query:  WRFTQEGNPPWKRVITSIYGTENHGWLPQPPKGSSRGRPWVAIEQQRHSFMSFLSFKV---HRIKFWKDNWLGNMPFEINF
        WR+  E +  W+RV+   YG++  GW     +G  R   W  I      FM+ ++FKV    RIKFW D+W G  P +  F
Subjt:  WRFTQEGNPPWKRVITSIYGTENHGWLPQPPKGSSRGRPWVAIEQQRHSFMSFLSFKV---HRIKFWKDNWLGNMPFEINF

A0A438JFY2 Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS22.3e-0940.74Show/hide
Query:  WRFTQEGNPPWKRVITSIYGTENHGWLPQPPKGSSRGRPWVAIEQQRHSFMSFLSFKV---HRIKFWKDNWLGNMPFEINF
        WRF  E NP WKRV+   YG E+ GW     +G    R W AI      F   + FKV   +R+KFW D W G++P    F
Subjt:  WRFTQEGNPPWKRVITSIYGTENHGWLPQPPKGSSRGRPWVAIEQQRHSFMSFLSFKV---HRIKFWKDNWLGNMPFEINF

A0A5D3C7F0 Uncharacterized protein4.3e-0835.8Show/hide
Query:  WRFTQEGNPPWKRVITSIYGTENHGWLPQPPKGSSRGRPWVAIEQQRHSFMSFLSFKV---HRIKFWKDNWLGNMPFEINF
        WRF++E N  W+ +I +IYG E  GW  + P      R W  I + + +F++F +F +    +IKFWKD+W    P    F
Subjt:  WRFTQEGNPPWKRVITSIYGTENHGWLPQPPKGSSRGRPWVAIEQQRHSFMSFLSFKV---HRIKFWKDNWLGNMPFEINF

A0A6J1E196 uncharacterized protein LOC1110250191.8e-1446.05Show/hide
Query:  WRFTQEGNPPWKRVITSIYGTENHGWLPQPPKGSSRGRPWVAIEQQRHSFMSFLSFKVH---RIKFWKDNWLGNMP
        W FT+E N  W+RVI SIYG + +GWL + PKG ++GRPW  I +   +F   + FK +   R+ FW D W GN+P
Subjt:  WRFTQEGNPPWKRVITSIYGTENHGWLPQPPKGSSRGRPWVAIEQQRHSFMSFLSFKVH---RIKFWKDNWLGNMP

A5AF89 Uncharacterized protein5.6e-0842.11Show/hide
Query:  WRFTQEGNPPWKRVITSIYGTENHGWLPQPPKGSSRGRPWVAIEQQRHSFMSFLSFKV---HRIKFWKDNWLGNMP
        WR+ +EG+  W +VI SIYG+ ++GW        S   PW AI Q    F SF  F V    RI+FW+D W G+ P
Subjt:  WRFTQEGNPPWKRVITSIYGTENHGWLPQPPKGSSRGRPWVAIEQQRHSFMSFLSFKV---HRIKFWKDNWLGNMP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGCGCTTCACTCAAGAAGGCAACCCTCCGTGGAAGCGAGTGATAACAAGCATTTATGGCACGGAGAATCATGGTTGGCTGCCTCAACCGCCCAAAGGAAGCAGTAGAGG
AAGACCTTGGGTGGCCATTGAGCAGCAAAGACATTCTTTCATGAGCTTTCTCTCTTTTAAAGTCCATAGAATCAAGTTTTGGAAGGACAATTGGCTCGGCAACATGCCTT
TTGAAATTAATTTCCGGACTTGTACCATATTTCCA
mRNA sequenceShow/hide mRNA sequence
TGGCGCTTCACTCAAGAAGGCAACCCTCCGTGGAAGCGAGTGATAACAAGCATTTATGGCACGGAGAATCATGGTTGGCTGCCTCAACCGCCCAAAGGAAGCAGTAGAGG
AAGACCTTGGGTGGCCATTGAGCAGCAAAGACATTCTTTCATGAGCTTTCTCTCTTTTAAAGTCCATAGAATCAAGTTTTGGAAGGACAATTGGCTCGGCAACATGCCTT
TTGAAATTAATTTCCGGACTTGTACCATATTTCCA
Protein sequenceShow/hide protein sequence
WRFTQEGNPPWKRVITSIYGTENHGWLPQPPKGSSRGRPWVAIEQQRHSFMSFLSFKVHRIKFWKDNWLGNMPFEINFRTCTIFP