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MS013804 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013804
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionABC transporter A family member 1 isoform X3
Genome locationscaffold541:130675..131310
RNA-Seq ExpressionMS013804
SyntenyMS013804
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152228.1 ABC transporter A family member 1 isoform X1 [Momordica charantia]2.4e-0496.55Show/hide
Query:  ARILLPAVVMLLLIAVRTQVGNRVHPPQP
        A ILLPAVVMLLLIAVRTQVGNRVHPPQP
Subjt:  ARILLPAVVMLLLIAVRTQVGNRVHPPQP
XP_022152229.1 ABC transporter A family member 1 isoform X2 [Momordica charantia]2.4e-0496.55Show/hide
Query:  ARILLPAVVMLLLIAVRTQVGNRVHPPQP
        A ILLPAVVMLLLIAVRTQVGNRVHPPQP
Subjt:  ARILLPAVVMLLLIAVRTQVGNRVHPPQP
XP_022152230.1 ABC transporter A family member 1 isoform X3 [Momordica charantia]2.4e-0496.55Show/hide
Query:  ARILLPAVVMLLLIAVRTQVGNRVHPPQP
        A ILLPAVVMLLLIAVRTQVGNRVHPPQP
Subjt:  ARILLPAVVMLLLIAVRTQVGNRVHPPQP
TrEMBL top hitse value%identityAlignment
A0A6J1DDC4 ABC transporter A family member 1 isoform X31.2e-0496.55Show/hide
Query:  ARILLPAVVMLLLIAVRTQVGNRVHPPQP
        A ILLPAVVMLLLIAVRTQVGNRVHPPQP
Subjt:  ARILLPAVVMLLLIAVRTQVGNRVHPPQP
A0A6J1DEA8 ABC transporter A family member 1 isoform X11.2e-0496.55Show/hide
Query:  ARILLPAVVMLLLIAVRTQVGNRVHPPQP
        A ILLPAVVMLLLIAVRTQVGNRVHPPQP
Subjt:  ARILLPAVVMLLLIAVRTQVGNRVHPPQP
A0A6J1DFF4 ABC transporter A family member 1 isoform X21.2e-0496.55Show/hide
Query:  ARILLPAVVMLLLIAVRTQVGNRVHPPQP
        A ILLPAVVMLLLIAVRTQVGNRVHPPQP
Subjt:  ARILLPAVVMLLLIAVRTQVGNRVHPPQP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGTTGACTCTAAAAGACGCCTCGCCAGCGCCAACTGCCTCCATTTTTGATCACCTTCTCTCTCTCTCTCTCTATCCTCCTTATGTCTCTGACTCTGTCTTCCCTTCGTC
TCTGAGAAGCTCCGTCCTCTCTACGATTCTCCGGAGATGGGAACTGCATGGAGGCAGCTCAAGGCCATGCTCCGCAAGAACTGGCTCCTCAAGATTCGCCACCCTTTCAT
CACCTCTGCAGAGGTCCTCTCTATTCATTCACTTGATTTCGCGGCTGCTTTACACTTCTCTTCATTTTCATCGTAATCTACACGCTAGGATTTTACTTCCGGCCGTTGTG
ATGTTGTTACTGATTGCCGTGAGGACGCAAGTTGGTAACAGAGTTCATCCTCCGCAACCG
mRNA sequenceShow/hide mRNA sequence
TTGTTGACTCTAAAAGACGCCTCGCCAGCGCCAACTGCCTCCATTTTTGATCACCTTCTCTCTCTCTCTCTCTATCCTCCTTATGTCTCTGACTCTGTCTTCCCTTCGTC
TCTGAGAAGCTCCGTCCTCTCTACGATTCTCCGGAGATGGGAACTGCATGGAGGCAGCTCAAGGCCATGCTCCGCAAGAACTGGCTCCTCAAGATTCGCCACCCTTTCAT
CACCTCTGCAGAGGTCCTCTCTATTCATTCACTTGATTTCGCGGCTGCTTTACACTTCTCTTCATTTTCATCGTAATCTACACGCTAGGATTTTACTTCCGGCCGTTGTG
ATGTTGTTACTGATTGCCGTGAGGACGCAAGTTGGTAACAGAGTTCATCCTCCGCAACCG
Protein sequenceShow/hide protein sequence
LLTLKDASPAPTASIFDHLLSLSLYPPYVSDSVFPSSLRSSVLSTILRRWELHGGSSRPCSARTGSSRFATLSSPLQRSSLFIHLISRLLYTSLHFHRNLHARILLPAVV
MLLLIAVRTQVGNRVHPPQP