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MS013806 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013806
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionStress-response A/B barrel domain-containing protein
Genome locationscaffold541:142150..142422
RNA-Seq ExpressionMS013806
SyntenyMS013806
Gene Ontology termsNA
InterPro domainsIPR011008 - Dimeric alpha-beta barrel
IPR013097 - Stress responsive alpha-beta barrel
IPR044662 - Stress-response A/B barrel domain-containing protein HS1/DABB1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040939.1 stress-response A/B barrel domain-containing protein [Cucumis melo var. makuwa]1.3e-1769.01Show/hide
Query:  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHLEFCLTLSTAMYKIVVLDF
        +K++S+I+ V FF WGHDVEGQDMLT GFTHVFSMTFDDKE I S  + P HLEFC T S A+ +IVVLDF
Subjt:  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHLEFCLTLSTAMYKIVVLDF

XP_004139472.2 stress-response A/B barrel domain-containing protein At5g22580 [Cucumis sativus]1.7e-1759.34Show/hide
Query:  HFNEFKLSYYLNQNQVRIQ-KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHLEFCLTLSTAMYKIVVLDF
        H    K    LN +++  Q +K++S+I+ V  F WGHDVEGQDMLT GFTHVFSMTFDDKE I S  + P HLEFC T S A+ KIVVLDF
Subjt:  HFNEFKLSYYLNQNQVRIQ-KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHLEFCLTLSTAMYKIVVLDF

XP_008461858.1 PREDICTED: stress-response A/B barrel domain-containing protein At5g22580-like [Cucumis melo]1.3e-1769.01Show/hide
Query:  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHLEFCLTLSTAMYKIVVLDF
        +K++S+I+ V FF WGHDVEGQDMLT GFTHVFSMTFDDKE I S  + P HLEFC T S A+ +IVVLDF
Subjt:  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHLEFCLTLSTAMYKIVVLDF

XP_022937510.1 stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita moschata]3.0e-1758.62Show/hide
Query:  EFKLSYYLNQNQVRIQKKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHLEFCLTLSTAMYKIVVLDF
        +FK S  L +   +++ K++S+I++V  F WGHDVEGQDM+T GFTHVFSMTFDDKE I S  + P HLEFC T S A+ KI+VLDF
Subjt:  EFKLSYYLNQNQVRIQKKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHLEFCLTLSTAMYKIVVLDF

XP_022969554.1 stress-response A/B barrel domain-containing protein At5g22580-like [Cucurbita maxima]5.0e-1766.2Show/hide
Query:  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHLEFCLTLSTAMYKIVVLDF
        +K++S+I++V  F WGHDVEGQDM+T GFTHVFSMTFDDKE I S  + P HLEFC T S A+ KI+VLDF
Subjt:  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHLEFCLTLSTAMYKIVVLDF

TrEMBL top hitse value%identityAlignment
A0A0A0LY53 Stress-response A/B barrel domain-containing protein8.4e-1859.34Show/hide
Query:  HFNEFKLSYYLNQNQVRIQ-KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHLEFCLTLSTAMYKIVVLDF
        H    K    LN +++  Q +K++S+I+ V  F WGHDVEGQDMLT GFTHVFSMTFDDKE I S  + P HLEFC T S A+ KIVVLDF
Subjt:  HFNEFKLSYYLNQNQVRIQ-KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHLEFCLTLSTAMYKIVVLDF

A0A1S3CFK4 stress-response A/B barrel domain-containing protein At5g22580-like6.4e-1869.01Show/hide
Query:  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHLEFCLTLSTAMYKIVVLDF
        +K++S+I+ V FF WGHDVEGQDMLT GFTHVFSMTFDDKE I S  + P HLEFC T S A+ +IVVLDF
Subjt:  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHLEFCLTLSTAMYKIVVLDF

A0A5A7TI03 Stress-response A/B barrel domain-containing protein6.4e-1869.01Show/hide
Query:  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHLEFCLTLSTAMYKIVVLDF
        +K++S+I+ V FF WGHDVEGQDMLT GFTHVFSMTFDDKE I S  + P HLEFC T S A+ +IVVLDF
Subjt:  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHLEFCLTLSTAMYKIVVLDF

A0A6J1FGY0 stress-response A/B barrel domain-containing protein At5g22580-like1.4e-1758.62Show/hide
Query:  EFKLSYYLNQNQVRIQKKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHLEFCLTLSTAMYKIVVLDF
        +FK S  L +   +++ K++S+I++V  F WGHDVEGQDM+T GFTHVFSMTFDDKE I S  + P HLEFC T S A+ KI+VLDF
Subjt:  EFKLSYYLNQNQVRIQKKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHLEFCLTLSTAMYKIVVLDF

A0A6J1I2Y7 stress-response A/B barrel domain-containing protein At5g22580-like2.4e-1766.2Show/hide
Query:  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHLEFCLTLSTAMYKIVVLDF
        +K++S+I++V  F WGHDVEGQDM+T GFTHVFSMTFDDKE I S  + P HLEFC T S A+ KI+VLDF
Subjt:  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINS--SFPIHLEFCLTLSTAMYKIVVLDF

SwissProt top hitse value%identityAlignment
Q9FK81 Stress-response A/B barrel domain-containing protein At5g225803.3e-1146.48Show/hide
Query:  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEG--INSSFPIHLEFCLTLSTAMYKIVVLDF
        + ++S I+ V  F WG D E  DML  GFTH FSMTF++K+G    +S P+H+EF    +  + KIV+LDF
Subjt:  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEG--INSSFPIHLEFCLTLSTAMYKIVVLDF

Arabidopsis top hitse value%identityAlignment
AT5G22580.1 Stress responsive A/B Barrel Domain2.3e-1246.48Show/hide
Query:  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEG--INSSFPIHLEFCLTLSTAMYKIVVLDF
        + ++S I+ V  F WG D E  DML  GFTH FSMTF++K+G    +S P+H+EF    +  + KIV+LDF
Subjt:  KKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEG--INSSFPIHLEFCLTLSTAMYKIVVLDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGGGAACACATTTCAACGAGTTCAAACTATCTTACTACTTAAATCAAAATCAAGTGAGGATACAGAAGAAGGTAATTTCTAATATTAACTTTGTCAATTTCTTTGGGTG
GGGACATGATGTGGAAGGTCAAGATATGTTAACACCAGGCTTCACACACGTCTTCTCAATGACATTTGATGACAAAGAAGGTATCAATTCGTCCTTCCCCATCCATCTTG
AGTTCTGCCTCACCTTGAGTACAGCAATGTATAAGATTGTGGTGCTTGATTTT
mRNA sequenceShow/hide mRNA sequence
AAGGGAACACATTTCAACGAGTTCAAACTATCTTACTACTTAAATCAAAATCAAGTGAGGATACAGAAGAAGGTAATTTCTAATATTAACTTTGTCAATTTCTTTGGGTG
GGGACATGATGTGGAAGGTCAAGATATGTTAACACCAGGCTTCACACACGTCTTCTCAATGACATTTGATGACAAAGAAGGTATCAATTCGTCCTTCCCCATCCATCTTG
AGTTCTGCCTCACCTTGAGTACAGCAATGTATAAGATTGTGGTGCTTGATTTT
Protein sequenceShow/hide protein sequence
KGTHFNEFKLSYYLNQNQVRIQKKVISNINFVNFFGWGHDVEGQDMLTPGFTHVFSMTFDDKEGINSSFPIHLEFCLTLSTAMYKIVVLDF