CuGenDBv2

Gene ID	MS013809
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	short integuments 2, mitochondrial
Genome location	scaffold541:243039..243284
RNA-Seq Expression	MS013809
Synteny	MS013809
Gene Ontology terms	GO:0005739 - mitochondrion (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function) GO:0016491 - oxidoreductase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022156767.1 short integuments 2, mitochondrial isoform X1 [Momordica charantia]

1.2e-28

85.37

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Query:  QDLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVPTLKS
        +DLV EVQRA Y SLSEFDGNVEDENDLES+ ELQFEALQK+MKIPH+A E RLKVSKKLLTLF AGKLGPFILDDVPT+KS
Subjt:  QDLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVPTLKS

XP_022156770.1 short integuments 2, mitochondrial isoform X2 [Momordica charantia]

1.2e-28

85.37

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Query:  QDLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVPTLKS
        +DLV EVQRA Y SLSEFDGNVEDENDLES+ ELQFEALQK+MKIPH+A E RLKVSKKLLTLF AGKLGPFILDDVPT+KS
Subjt:  QDLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVPTLKS

XP_022966362.1 short integuments 2, mitochondrial [Cucurbita maxima]

1.6e-25

81.25

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Query:  QDLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVPTL
        +DLV +VQRA Y  LS FDGNVEDENDLES+ ELQFEALQK+MKIPH+A EARLKVSKKLLTLF AGKLGPFILDDVP +
Subjt:  QDLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVPTL

XP_038883550.1 short integuments 2, mitochondrial isoform X1 [Benincasa hispida]

3.1e-26

80.25

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Query:  QDLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVPTLK
        +DLV EVQRA Y ++SEFDGNVEDENDLES+ E+QFEALQK+MKIPH+A EARL+VSKKLLTLF AGKLGPFILDDVP  K
Subjt:  QDLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVPTLK

XP_038883551.1 short integuments 2, mitochondrial isoform X2 [Benincasa hispida]

3.1e-26

80.25

Show/hide

Query:  QDLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVPTLK
        +DLV EVQRA Y ++SEFDGNVEDENDLES+ E+QFEALQK+MKIPH+A EARL+VSKKLLTLF AGKLGPFILDDVP  K
Subjt:  QDLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVPTLK

TrEMBL top hits

e value

%identity

Alignment

A0A444YHP6 G domain-containing protein

4.1e-24

78.21

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Query:  QDLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVP
        +DLV+EVQRA Y +L+EFDGNVEDENDLE + +LQF ALQK+MKIPH+A EARL VSKK LTLF AGKLGPFILDDVP
Subjt:  QDLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVP

A0A6J1DR97 short integuments 2, mitochondrial isoform X2

5.6e-29

85.37

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Query:  QDLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVPTLKS
        +DLV EVQRA Y SLSEFDGNVEDENDLES+ ELQFEALQK+MKIPH+A E RLKVSKKLLTLF AGKLGPFILDDVPT+KS
Subjt:  QDLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVPTLKS

A0A6J1DRI9 short integuments 2, mitochondrial isoform X1

5.6e-29

85.37

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Query:  QDLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVPTLKS
        +DLV EVQRA Y SLSEFDGNVEDENDLES+ ELQFEALQK+MKIPH+A E RLKVSKKLLTLF AGKLGPFILDDVPT+KS
Subjt:  QDLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVPTLKS

A0A6J1EAB7 short integuments 2, mitochondrial

2.2e-25

79.75

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Query:  QDLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVPT
        +DLV +VQRA Y + S FDGNVEDENDLES+ E+QFEALQK+MKIPH+A EARLKVSKKLLTLF AGKLGPFILDDVP+
Subjt:  QDLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVPT

A0A6J1HMR9 short integuments 2, mitochondrial

7.5e-26

81.25

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Query:  QDLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVPTL
        +DLV +VQRA Y  LS FDGNVEDENDLES+ ELQFEALQK+MKIPH+A EARLKVSKKLLTLF AGKLGPFILDDVP +
Subjt:  QDLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVPTL

SwissProt top hits

e value

%identity

Alignment

O82497 DAR GTPase 2, mitochondrial

1.6e-09

41.77

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Query:  LVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVE-ARLKVSKKLLTLFVAGKLGPFILDDVPTL
        +V +V+R  YE++S FDGN+EDE  + ++ E QF AL+  +++P  A E A L+V+ K+L L+  G+LG + L+ V  L
Subjt:  LVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVE-ARLKVSKKLLTLFVAGKLGPFILDDVPTL

Q8L607 Short integuments 2, mitochondrial

3.4e-23

70.13

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Query:  DLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVP
        D++ EVQR+ Y +LSEFDG+ EDENDLE + E QFE LQK++KIPH+A EARL VSKK LTLF  G+LGPFILDDVP
Subjt:  DLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVP

Arabidopsis top hits

e value

%identity

Alignment

AT2G41670.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

2.4e-24

70.13

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Query:  DLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVP
        D++ EVQR+ Y +LSEFDG+ EDENDLE + E QFE LQK++KIPH+A EARL VSKK LTLF  G+LGPFILDDVP
Subjt:  DLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVP

AT4G10650.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

1.2e-10

41.77

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Query:  LVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVE-ARLKVSKKLLTLFVAGKLGPFILDDVPTL
        +V +V+R  YE++S FDGN+EDE  + ++ E QF AL+  +++P  A E A L+V+ K+L L+  G+LG + L+ V  L
Subjt:  LVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVE-ARLKVSKKLLTLFVAGKLGPFILDDVPTL

Sequences

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CDS sequence

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CAGGATCTTGTTATCGAAGTTCAACGCGCACCGTATGAAAGTCTGTCAGAATTTGATGGTAATGTAGAAGATGAGAATGATTTAGAAAGTGTTACCGAACTGCAATTCGA
AGCATTGCAGAAATCGATGAAGATACCTCATCGGGCAGTGGAAGCTCGCTTGAAAGTATCAAAGAAACTACTAACTCTATTCGTGGCAGGTAAGCTTGGTCCATTCATCC
TTGATGATGTCCCCACCTTAAAATCT

mRNA sequence

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Protein sequence

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QDLVIEVQRAPYESLSEFDGNVEDENDLESVTELQFEALQKSMKIPHRAVEARLKVSKKLLTLFVAGKLGPFILDDVPTLKS

MS013809 (gene) of Bitter gourd (TR) v1 genome