; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013837 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013837
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPR domain zinc finger protein 8, putative isoform 1
Genome locationscaffold607:130681..131409
RNA-Seq ExpressionMS013837
SyntenyMS013837
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR038971 - Cyclin-dependent protein kinase inhibitor SMR11/SMR16


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055894.1 PR domain zinc finger protein 8, putative isoform 1 [Cucumis melo var. makuwa]5.3e-9076.54Show/hide
Query:  MDFARCFDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPSDSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDP
        MDFARC DESKESE+ S+KCCSKVE Q E+VELR        P+ P+TPDADRESGDFPSDSKSP TQVV ++ L LTCLDSLGER EAPLE   +S DP
Subjt:  MDFARCFDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPSDSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDP

Query:  LCSPRTPKDGVFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSSSSSSSMQLEEEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSSQSD
        LCSPRTPKDGVFDPFSP PAHLALAP+SRKYFSGSVGFV RRLQFG  SSSSS+QL E  EEQSISDSELLEAVYENLLEVIVS+QAE+SLAQ SSSQSD
Subjt:  LCSPRTPKDGVFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSSSSSSSMQLEEEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSSQSD

Query:  SSNCITPPAQYLSGIAQTCPPAPIKPLGKFRDFDLGLCRKLEF
        S +C TPP  +LSG+AQTCP AP+KP  K R+ D+GLCRKLEF
Subjt:  SSNCITPPAQYLSGIAQTCPPAPIKPLGKFRDFDLGLCRKLEF

XP_004142723.1 cyclin-dependent protein kinase inhibitor SMR11 isoform X1 [Cucumis sativus]2.8e-9176.54Show/hide
Query:  MDFARCFDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPSDSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDP
        MDFARC DESKESE+ S+KCCSKVE Q E+VELR        P+ P+TPDADRESGDFPSDSKSP TQVV ++ L LTCLDSLGER+EAPLE   +S DP
Subjt:  MDFARCFDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPSDSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDP

Query:  LCSPRTPKDGVFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSSSSSSSMQLEEEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSSQSD
        LCSPRTPKDGVFDPFSP PAHLALAP+SRKYFSGSVGFV RRLQFG  SSSSS+QL E  EEQSISDSELLEAVYENLLEVIVS+QAE+SLAQLSSSQSD
Subjt:  LCSPRTPKDGVFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSSSSSSSMQLEEEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSSQSD

Query:  SSNCITPPAQYLSGIAQTCPPAPIKPLGKFRDFDLGLCRKLEF
        S +C TPP  ++SG+AQTCP AP+KP  K R+ D+GLCRKLEF
Subjt:  SSNCITPPAQYLSGIAQTCPPAPIKPLGKFRDFDLGLCRKLEF

XP_008463308.1 PREDICTED: uncharacterized protein LOC103501496 [Cucumis melo]5.3e-9076.54Show/hide
Query:  MDFARCFDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPSDSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDP
        MDFARC DESKESE+ S+KCCSKVE Q E+VELR        P+ P+TPDADRESGDFPSDSKSP TQVV ++ L LTCLDSLGER EAPLE   +S DP
Subjt:  MDFARCFDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPSDSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDP

Query:  LCSPRTPKDGVFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSSSSSSSMQLEEEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSSQSD
        LCSPRTPKDGVFDPFSP PAHLALAP+SRKYFSGSVGFV RRLQFG  SSSSS+QL E  EEQSISDSELLEAVYENLLEVIVS+QAE+SLAQ SSSQSD
Subjt:  LCSPRTPKDGVFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSSSSSSSMQLEEEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSSQSD

Query:  SSNCITPPAQYLSGIAQTCPPAPIKPLGKFRDFDLGLCRKLEF
        S +C TPP  +LSG+AQTCP AP+KP  K R+ D+GLCRKLEF
Subjt:  SSNCITPPAQYLSGIAQTCPPAPIKPLGKFRDFDLGLCRKLEF

XP_022156261.1 uncharacterized protein LOC111023190 [Momordica charantia]8.4e-12899.59Show/hide
Query:  MDFARCFDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPSDSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDP
        MDFARC DESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPSDSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDP
Subjt:  MDFARCFDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPSDSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDP

Query:  LCSPRTPKDGVFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSSSSSSSMQLEEEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSSQSD
        LCSPRTPKDGVFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSSSSSSSMQLEEEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSSQSD
Subjt:  LCSPRTPKDGVFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSSSSSSSMQLEEEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSSQSD

Query:  SSNCITPPAQYLSGIAQTCPPAPIKPLGKFRDFDLGLCRKLEF
        SSNCITPPAQYLSGIAQTCPPAPIKPLGKFRDFDLGLCRKLEF
Subjt:  SSNCITPPAQYLSGIAQTCPPAPIKPLGKFRDFDLGLCRKLEF

XP_038883894.1 unknown protein 1 [Benincasa hispida]5.2e-9376.54Show/hide
Query:  MDFARCFDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPSDSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDP
        MDFARC DESKESE+ S+KCC+KVEAQPE+VELR       APLGP+TPDADRESGDF SDSKSP TQVV ++ L LTC+DSL E+ EAPLE+  +S DP
Subjt:  MDFARCFDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPSDSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDP

Query:  LCSPRTPKDGVFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSSSSSSSMQLEEEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSSQSD
        LCSPRTPKDGVFDPFSPGPAHLALAP+SRK F+GSVGFVARRLQFGSSSSSS +Q+ E  EEQSISD+ELLEAVYENLLEVIVS+QAE+SL QLSSSQSD
Subjt:  LCSPRTPKDGVFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSSSSSSSMQLEEEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSSQSD

Query:  SSNCITPPAQYLSGIAQTCPPAPIKPLGKFRDFDLGLCRKLEF
        SS+C TPP  ++SG+AQTCP AP+KPL K R+ D+GLCRKLEF
Subjt:  SSNCITPPAQYLSGIAQTCPPAPIKPLGKFRDFDLGLCRKLEF

TrEMBL top hitse value%identityAlignment
A0A0A0KYB8 Uncharacterized protein1.4e-9176.54Show/hide
Query:  MDFARCFDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPSDSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDP
        MDFARC DESKESE+ S+KCCSKVE Q E+VELR        P+ P+TPDADRESGDFPSDSKSP TQVV ++ L LTCLDSLGER+EAPLE   +S DP
Subjt:  MDFARCFDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPSDSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDP

Query:  LCSPRTPKDGVFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSSSSSSSMQLEEEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSSQSD
        LCSPRTPKDGVFDPFSP PAHLALAP+SRKYFSGSVGFV RRLQFG  SSSSS+QL E  EEQSISDSELLEAVYENLLEVIVS+QAE+SLAQLSSSQSD
Subjt:  LCSPRTPKDGVFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSSSSSSSMQLEEEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSSQSD

Query:  SSNCITPPAQYLSGIAQTCPPAPIKPLGKFRDFDLGLCRKLEF
        S +C TPP  ++SG+AQTCP AP+KP  K R+ D+GLCRKLEF
Subjt:  SSNCITPPAQYLSGIAQTCPPAPIKPLGKFRDFDLGLCRKLEF

A0A1S3CIW8 uncharacterized protein LOC1035014962.6e-9076.54Show/hide
Query:  MDFARCFDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPSDSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDP
        MDFARC DESKESE+ S+KCCSKVE Q E+VELR        P+ P+TPDADRESGDFPSDSKSP TQVV ++ L LTCLDSLGER EAPLE   +S DP
Subjt:  MDFARCFDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPSDSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDP

Query:  LCSPRTPKDGVFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSSSSSSSMQLEEEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSSQSD
        LCSPRTPKDGVFDPFSP PAHLALAP+SRKYFSGSVGFV RRLQFG  SSSSS+QL E  EEQSISDSELLEAVYENLLEVIVS+QAE+SLAQ SSSQSD
Subjt:  LCSPRTPKDGVFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSSSSSSSMQLEEEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSSQSD

Query:  SSNCITPPAQYLSGIAQTCPPAPIKPLGKFRDFDLGLCRKLEF
        S +C TPP  +LSG+AQTCP AP+KP  K R+ D+GLCRKLEF
Subjt:  SSNCITPPAQYLSGIAQTCPPAPIKPLGKFRDFDLGLCRKLEF

A0A5A7UL34 PR domain zinc finger protein 8, putative isoform 12.6e-9076.54Show/hide
Query:  MDFARCFDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPSDSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDP
        MDFARC DESKESE+ S+KCCSKVE Q E+VELR        P+ P+TPDADRESGDFPSDSKSP TQVV ++ L LTCLDSLGER EAPLE   +S DP
Subjt:  MDFARCFDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPSDSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDP

Query:  LCSPRTPKDGVFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSSSSSSSMQLEEEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSSQSD
        LCSPRTPKDGVFDPFSP PAHLALAP+SRKYFSGSVGFV RRLQFG  SSSSS+QL E  EEQSISDSELLEAVYENLLEVIVS+QAE+SLAQ SSSQSD
Subjt:  LCSPRTPKDGVFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSSSSSSSMQLEEEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSSQSD

Query:  SSNCITPPAQYLSGIAQTCPPAPIKPLGKFRDFDLGLCRKLEF
        S +C TPP  +LSG+AQTCP AP+KP  K R+ D+GLCRKLEF
Subjt:  SSNCITPPAQYLSGIAQTCPPAPIKPLGKFRDFDLGLCRKLEF

A0A6J1DUE1 uncharacterized protein LOC1110231904.1e-12899.59Show/hide
Query:  MDFARCFDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPSDSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDP
        MDFARC DESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPSDSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDP
Subjt:  MDFARCFDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPSDSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDP

Query:  LCSPRTPKDGVFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSSSSSSSMQLEEEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSSQSD
        LCSPRTPKDGVFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSSSSSSSMQLEEEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSSQSD
Subjt:  LCSPRTPKDGVFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSSSSSSSMQLEEEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSSQSD

Query:  SSNCITPPAQYLSGIAQTCPPAPIKPLGKFRDFDLGLCRKLEF
        SSNCITPPAQYLSGIAQTCPPAPIKPLGKFRDFDLGLCRKLEF
Subjt:  SSNCITPPAQYLSGIAQTCPPAPIKPLGKFRDFDLGLCRKLEF

A0A6J1GG30 uncharacterized protein LOC1114538381.7e-7868.7Show/hide
Query:  MDFARCFDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPSDSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDP
        MDFARC DESKES+H  SKCCSK EAQPE+VELR       AP+ P+TPDADRES DFPSDSKSP TQVV +R+L L+  D        PLE       P
Subjt:  MDFARCFDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPSDSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDP

Query:  LCSPRTPKDGVFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSS---SSSSSMQLEEEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSS
        LCSPRTPKDGVFDPFSPGPAHLALAP+ RK FSGSVGFVARRLQF SS   SSSSS+Q  E  EEQ+I+DSELLEAVYENLLE+I+S+QAE+SLA ++SS
Subjt:  LCSPRTPKDGVFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSS---SSSSSMQLEEEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSS

Query:  QSDSSNCITPPAQYLSGIAQTCPPAPIKPLGKFRDFDLGLCRKLEF
         +DS +C TPPA +++GIAQTCP AP+KP  K R+ DLGLCRKLEF
Subjt:  QSDSSNCITPPAQYLSGIAQTCPPAPIKPLGKFRDFDLGLCRKLEF

SwissProt top hitse value%identityAlignment
P85192 Unknown protein 12.2e-0640.45Show/hide
Query:  EEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSSQSDSSNCITPP-AQYLSGIAQTCPPAPI--KPLGKFRDFDLGLCRKLEF
        E   E    +  L+E VYE++LE I+  QAE  LA++  S S      TPP A    G+ +TCP AP+  K +   R  D+ LCRKL+F
Subjt:  EEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSSQSDSSNCITPP-AQYLSGIAQTCPPAPI--KPLGKFRDFDLGLCRKLEF

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTTGCACGATGTTTCGATGAATCTAAGGAATCCGAACATCCGTCTAGCAAATGTTGCAGTAAAGTGGAAGCTCAGCCGGAGGTTGTTGAGCTACGGGGTCCAGG
TGCCGCCATGGCTGCTCCTCTTGGGCCTGCGACGCCTGATGCTGACCGAGAGAGCGGTGATTTTCCTTCTGATTCGAAGTCCCCACACACCCAGGTTGTGCCCAACAGAT
CCCTTCAGTTAACTTGTTTAGATTCTTTAGGTGAAAGGAGCGAGGCCCCTTTAGAAGAGGGTCTTGAATCTTCTGATCCCCTCTGCAGCCCCCGTACTCCTAAGGATGGC
GTTTTTGACCCCTTTTCCCCTGGCCCTGCTCATTTGGCGTTAGCTCCTCTGTCTAGAAAGTATTTCAGTGGCTCTGTTGGATTCGTTGCCCGCCGCCTTCAGTTTGGTTC
TTCTTCTTCCTCTTCTTCAATGCAACTGGAGGAAGAAGCTGAAGAACAGTCCATTTCTGATAGCGAGCTGTTAGAGGCAGTTTATGAAAACCTCTTGGAAGTTATTGTCT
CCAATCAGGCTGAGGCCTCTCTTGCTCAGCTCTCGAGCTCTCAAAGTGATTCTTCCAATTGTATCACCCCGCCTGCACAGTATTTGAGTGGGATTGCTCAGACTTGCCCC
CCTGCACCCATCAAGCCATTGGGAAAGTTTCGAGACTTCGACTTGGGTTTGTGCAGAAAGCTTGAGTTC
mRNA sequenceShow/hide mRNA sequence
ATGGATTTTGCACGATGTTTCGATGAATCTAAGGAATCCGAACATCCGTCTAGCAAATGTTGCAGTAAAGTGGAAGCTCAGCCGGAGGTTGTTGAGCTACGGGGTCCAGG
TGCCGCCATGGCTGCTCCTCTTGGGCCTGCGACGCCTGATGCTGACCGAGAGAGCGGTGATTTTCCTTCTGATTCGAAGTCCCCACACACCCAGGTTGTGCCCAACAGAT
CCCTTCAGTTAACTTGTTTAGATTCTTTAGGTGAAAGGAGCGAGGCCCCTTTAGAAGAGGGTCTTGAATCTTCTGATCCCCTCTGCAGCCCCCGTACTCCTAAGGATGGC
GTTTTTGACCCCTTTTCCCCTGGCCCTGCTCATTTGGCGTTAGCTCCTCTGTCTAGAAAGTATTTCAGTGGCTCTGTTGGATTCGTTGCCCGCCGCCTTCAGTTTGGTTC
TTCTTCTTCCTCTTCTTCAATGCAACTGGAGGAAGAAGCTGAAGAACAGTCCATTTCTGATAGCGAGCTGTTAGAGGCAGTTTATGAAAACCTCTTGGAAGTTATTGTCT
CCAATCAGGCTGAGGCCTCTCTTGCTCAGCTCTCGAGCTCTCAAAGTGATTCTTCCAATTGTATCACCCCGCCTGCACAGTATTTGAGTGGGATTGCTCAGACTTGCCCC
CCTGCACCCATCAAGCCATTGGGAAAGTTTCGAGACTTCGACTTGGGTTTGTGCAGAAAGCTTGAGTTC
Protein sequenceShow/hide protein sequence
MDFARCFDESKESEHPSSKCCSKVEAQPEVVELRGPGAAMAAPLGPATPDADRESGDFPSDSKSPHTQVVPNRSLQLTCLDSLGERSEAPLEEGLESSDPLCSPRTPKDG
VFDPFSPGPAHLALAPLSRKYFSGSVGFVARRLQFGSSSSSSSMQLEEEAEEQSISDSELLEAVYENLLEVIVSNQAEASLAQLSSSQSDSSNCITPPAQYLSGIAQTCP
PAPIKPLGKFRDFDLGLCRKLEF