; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013862 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013862
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNon-specific lipid-transfer protein
Genome locationscaffold607:353601..353951
RNA-Seq ExpressionMS013862
SyntenyMS013862
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR000528 - Plant non-specific lipid-transfer protein/Par allergen
IPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144080.1 non-specific lipid-transfer protein 1-like [Momordica charantia]6.6e-5498.28Show/hide
Query:  MASGSVKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPA
        MASGSVKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVI  VSYNPSNVANAAALPA
Subjt:  MASGSVKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPA

Query:  RCGVNFPYKISPSIDC
        RCGVNFPYKISPSIDC
Subjt:  RCGVNFPYKISPSIDC

XP_022925226.1 non-specific lipid-transfer protein 1-like [Cucurbita moschata]3.9e-3061.06Show/hide
Query:  SVKLSLAAALLC-IVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCG
        +VK+ L  AL+C I++G +V+EAA++CNQVVSDL  CVS+VT GGTPS  CC+GV+ LN  A T ADRQ  C CL+S++ GVSYN   +ANAAALPA+CG
Subjt:  SVKLSLAAALLC-IVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCG

Query:  VNFPYKISPSIDC
        V  PYKI P  DC
Subjt:  VNFPYKISPSIDC

XP_022966484.1 non-specific lipid-transfer protein 1-like [Cucurbita maxima]1.8e-3061.95Show/hide
Query:  SVKLSLAAALLC-IVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCG
        +VK+ L  AL+C I++G +V+EAA++CNQVVSDL  CVS+VT GG PS  CC+GV+ LN  A T ADRQ  C CL+S++ GVSYN   +ANAAALPARCG
Subjt:  SVKLSLAAALLC-IVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCG

Query:  VNFPYKISPSIDC
        V  PYKI P IDC
Subjt:  VNFPYKISPSIDC

XP_023518220.1 non-specific lipid-transfer protein 1-like [Cucurbita pepo subsp. pepo]2.3e-3061.06Show/hide
Query:  SVKLSLAAALLC-IVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCG
        +VK+ L  AL+C I++G +V+EAA++CNQVVSDL  CVS+VT GGTPS  CC+GV+ LN  A T ADRQ  C CL+S++ GVSYN   +ANAAALP++CG
Subjt:  SVKLSLAAALLC-IVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCG

Query:  VNFPYKISPSIDC
        V  PYKI P IDC
Subjt:  VNFPYKISPSIDC

XP_023521379.1 non-specific lipid-transfer protein 1-like [Cucurbita pepo subsp. pepo]4.6e-3162.83Show/hide
Query:  SVKLSLAAALLC-IVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCG
        +VK+ L  AL+C I++G +V+EAA++CNQVVSDL  CVS+VT GGTPS  CC+GV+ LN  A T ADRQ  C CL+S++ GVSYN   +ANAAALPARCG
Subjt:  SVKLSLAAALLC-IVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCG

Query:  VNFPYKISPSIDC
        V  PYKI P IDC
Subjt:  VNFPYKISPSIDC

TrEMBL top hitse value%identityAlignment
A0A1S3CIS8 Non-specific lipid-transfer protein9.4e-3062.5Show/hide
Query:  VKLSLAAALLCIVIGAKV-AEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGV
        +KL L   LL  VIG  V  EA ++CNQVVS+L+PC+S+VT GG+PS  CC+GVR LN  AQTT DRQ  C+CLKS+I GV+YN  NVANAAALP +CGV
Subjt:  VKLSLAAALLCIVIGAKV-AEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGV

Query:  NFPYKISPSIDC
        N PY I+P+ DC
Subjt:  NFPYKISPSIDC

A0A5D3CEZ6 Non-specific lipid-transfer protein9.4e-3062.5Show/hide
Query:  VKLSLAAALLCIVIGAKV-AEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGV
        +KL L   LL  VIG  V  EA ++CNQVVS+L+PC+S+VT GG+PS  CC+GVR LN  AQTT DRQ  C+CLKS+I GV+YN  NVANAAALP +CGV
Subjt:  VKLSLAAALLCIVIGAKV-AEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGV

Query:  NFPYKISPSIDC
        N PY I+P+ DC
Subjt:  NFPYKISPSIDC

A0A6J1CQM5 Non-specific lipid-transfer protein3.2e-5498.28Show/hide
Query:  MASGSVKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPA
        MASGSVKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVI  VSYNPSNVANAAALPA
Subjt:  MASGSVKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPA

Query:  RCGVNFPYKISPSIDC
        RCGVNFPYKISPSIDC
Subjt:  RCGVNFPYKISPSIDC

A0A6J1EBM4 Non-specific lipid-transfer protein1.9e-3061.06Show/hide
Query:  SVKLSLAAALLC-IVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCG
        +VK+ L  AL+C I++G +V+EAA++CNQVVSDL  CVS+VT GGTPS  CC+GV+ LN  A T ADRQ  C CL+S++ GVSYN   +ANAAALPA+CG
Subjt:  SVKLSLAAALLC-IVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCG

Query:  VNFPYKISPSIDC
        V  PYKI P  DC
Subjt:  VNFPYKISPSIDC

A0A6J1HTX7 Non-specific lipid-transfer protein8.5e-3161.95Show/hide
Query:  SVKLSLAAALLC-IVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCG
        +VK+ L  AL+C I++G +V+EAA++CNQVVSDL  CVS+VT GG PS  CC+GV+ LN  A T ADRQ  C CL+S++ GVSYN   +ANAAALPARCG
Subjt:  SVKLSLAAALLC-IVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCG

Query:  VNFPYKISPSIDC
        V  PYKI P IDC
Subjt:  VNFPYKISPSIDC

SwissProt top hitse value%identityAlignment
Q39950 Non-specific lipid-transfer protein2.5e-2454.21Show/hide
Query:  LAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYK
        L A + C+V+GA   E A+SC QV S LAPC+S++T GG     CC+GV++LNS A+TT DRQ AC CLKS    +S    N  NAA+ P +CGV+ PYK
Subjt:  LAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYK

Query:  ISPSIDC
        ISPS DC
Subjt:  ISPSIDC

Q43017 Non-specific lipid-transfer protein 13.7e-2351.3Show/hide
Query:  SGSVKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGV-SYNPSNVANAAALPAR
        S   KL+L  A LC+V+   +A+ A++C QV S+LAPC+ +V  GG     CCNG+R +N+ A+TT DRQ AC CLK + A V   NP+   NAAALP +
Subjt:  SGSVKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGV-SYNPSNVANAAALPAR

Query:  CGVNFPYKISPSIDC
        CGVN PY+ISPS +C
Subjt:  CGVNFPYKISPSIDC

Q43019 Non-specific lipid-transfer protein 37.2e-2753.27Show/hide
Query:  LAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYK
        L A + C+ +G   A AA+SC QVV++L PC+++V +GG  +  CC GVR+L S AQTTADRQ  C CLK  + G+ Y  +N   AA LP +CGVN PYK
Subjt:  LAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYK

Query:  ISPSIDC
        ISPS DC
Subjt:  ISPSIDC

Q9LDB4 Non-specific lipid-transfer protein 62.2e-2853.92Show/hide
Query:  LCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSI
        +C+V+     EAA+SCN V++DL PC+S+VT GG    +CCNG+ TL SQAQT+ DRQG C+C+KS I G++ +P  + NA  LP++CGV+ PYK SPS 
Subjt:  LCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSI

Query:  DC
        DC
Subjt:  DC

Q9M5X8 Non-specific lipid-transfer protein4.3e-2452.63Show/hide
Query:  SGSVKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARC
        S   KL+L  A LC+V+   +A+ A++C QV S+LAPC+++V  GG     CCNG+R +N+ A+TTADRQ AC CLK + A V     N  NAAALP +C
Subjt:  SGSVKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARC

Query:  GVNFPYKISPSIDC
        GVN PYKISPS +C
Subjt:  GVNFPYKISPSIDC

Arabidopsis top hitse value%identityAlignment
AT2G38540.1 lipid transfer protein 11.3e-1842.98Show/hide
Query:  SGSVKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARC
        +G +KL+       IV G   + AA+SC  V S+LA C+ +V  GG     CC+GV+ LNS A+TT DRQ AC C++     +  +  N   AA +P  C
Subjt:  SGSVKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARC

Query:  GVNFPYKISPSIDC
        GVN PYKIS S +C
Subjt:  GVNFPYKISPSIDC

AT3G08770.1 lipid transfer protein 61.6e-2953.92Show/hide
Query:  LCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSI
        +C+V+     EAA+SCN V++DL PC+S+VT GG    +CCNG+ TL SQAQT+ DRQG C+C+KS I G++ +P  + NA  LP++CGV+ PYK SPS 
Subjt:  LCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSI

Query:  DC
        DC
Subjt:  DC

AT3G08770.2 lipid transfer protein 61.6e-2953.92Show/hide
Query:  LCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSI
        +C+V+     EAA+SCN V++DL PC+S+VT GG    +CCNG+ TL SQAQT+ DRQG C+C+KS I G++ +P  + NA  LP++CGV+ PYK SPS 
Subjt:  LCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSI

Query:  DC
        DC
Subjt:  DC

AT5G01870.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4.9e-2347.75Show/hide
Query:  VKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVN
        +++ L   LL   I A  +EAA+SCN V ++L PCV +V  GG     CCNG+R L+ QA + +D+QG C+C+KSV+  VSY+   +  AAALP +CGV 
Subjt:  VKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVN

Query:  FPYKISPSIDC
         PYKI PS +C
Subjt:  FPYKISPSIDC

AT5G59320.1 lipid transfer protein 32.8e-1846.6Show/hide
Query:  LCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVS-YNPSNVANAAALPARCGVNFPYKISPS
        +CIV      +AA+SC  V   LAPC ++++ GG     CC GV+TLNS A+TT DRQ AC+C++S    +S  NPS    A+ LP +CGV+ PY IS S
Subjt:  LCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVS-YNPSNVANAAALPARCGVNFPYKISPS

Query:  IDC
         +C
Subjt:  IDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCGGCTCCGTGAAGCTTAGTTTGGCAGCAGCGCTTCTTTGCATTGTGATCGGTGCAAAGGTGGCTGAAGCGGCTATGTCGTGCAACCAAGTGGTCAGCGACTT
GGCTCCATGTGTGTCGTTTGTGACCAGCGGCGGAACTCCGTCGATGATTTGCTGCAATGGCGTGAGGACCCTAAACAGTCAGGCTCAGACGACAGCCGACCGACAGGGGG
CGTGTCAATGCTTGAAATCGGTCATCGCTGGAGTCTCGTATAATCCCAGCAATGTTGCTAATGCTGCTGCTCTTCCGGCACGCTGTGGCGTTAATTTTCCATACAAGATT
AGCCCTAGTATTGATTGCATG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGCGGCTCCGTGAAGCTTAGTTTGGCAGCAGCGCTTCTTTGCATTGTGATCGGTGCAAAGGTGGCTGAAGCGGCTATGTCGTGCAACCAAGTGGTCAGCGACTT
GGCTCCATGTGTGTCGTTTGTGACCAGCGGCGGAACTCCGTCGATGATTTGCTGCAATGGCGTGAGGACCCTAAACAGTCAGGCTCAGACGACAGCCGACCGACAGGGGG
CGTGTCAATGCTTGAAATCGGTCATCGCTGGAGTCTCGTATAATCCCAGCAATGTTGCTAATGCTGCTGCTCTTCCGGCACGCTGTGGCGTTAATTTTCCATACAAGATT
AGCCCTAGTATTGATTGCATG
Protein sequenceShow/hide protein sequence
MASGSVKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKI
SPSIDCM