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MS013864 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013864
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationscaffold607:362263..362463
RNA-Seq ExpressionMS013864
SyntenyMS013864
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8399813.1 hypothetical protein HHK36_015684 [Tetracentron sinense]2.0e-1059.38Show/hide
Query:  GASEGHFV-VYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLD
        G   G F+ +YVGEE+KRYVVPL  LSS +FQALL QFE+ I     G + LPCS Q+FE VLD
Subjt:  GASEGHFV-VYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLD

KAF8402501.1 hypothetical protein HHK36_010586 [Tetracentron sinense]4.5e-1560.94Show/hide
Query:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDLVNA
        EG   +YVGEE+ ++VVPLKCLSS MFQALLNQFE+ I    +G + +PCS Q+F+WVLDL  A
Subjt:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDLVNA

KDO87260.1 hypothetical protein CISIN_1g041682mg [Citrus sinensis]1.7e-0945.31Show/hide
Query:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDLVNA
        +G  V+Y+GE ++++VVP++CLSS+MF+ALLNQFE          ++LPCS  +F+W+L+L ++
Subjt:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDLVNA

PON94429.1 Small auxin-up RNA [Trema orientale]5.7e-1051.56Show/hide
Query:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDLVNA
        EG F +YVGEE KRYVVPL  LS+ +FQALLNQF   I    D  + +PCS ++FE +L  +++
Subjt:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDLVNA

XP_003632601.2 PREDICTED: indole-3-acetic acid-induced protein ARG7-like [Vitis vinifera]3.7e-0952.38Show/hide
Query:  GHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDLVNA
        G+  +YVGEE K Y VP++CLSS+M QALL QFE  I    +G + L CS+Q+FEWV+ +  A
Subjt:  GHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDLVNA

TrEMBL top hitse value%identityAlignment
A0A067H8G4 Uncharacterized protein8.1e-1045.31Show/hide
Query:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDLVNA
        +G  V+Y+GE ++++VVP++CLSS+MF+ALLNQFE          ++LPCS  +F+W+L+L ++
Subjt:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDLVNA

A0A2N9G5D1 Uncharacterized protein9.5e-1158.93Show/hide
Query:  VYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDL
        ++VGEE+K YV+P  CLSS MFQAL NQFE+ I  G+   + LPCS Q+FEW+L+L
Subjt:  VYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDL

A0A2N9G647 Uncharacterized protein3.3e-1156.67Show/hide
Query:  GHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDL
        G   ++VGEE+K YV+P  CLSS MFQAL NQFE  I   +   +MLPCS Q+FEW+L+L
Subjt:  GHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDL

A0A2N9J801 Uncharacterized protein1.9e-1156.67Show/hide
Query:  GHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDL
        G   ++VGEE+K YV+P  CLSS MFQAL NQFE+ I  G+   + LPCS Q+FEW+L+L
Subjt:  GHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDL

A0A2P5F9G2 Small auxin-up RNA2.8e-1051.56Show/hide
Query:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDLVNA
        EG F +YVGEE KRYVVPL  LS+ +FQALLNQF   I    D  + +PCS ++FE +L  +++
Subjt:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDLVNA

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR501.1e-0637.1Show/hide
Query:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDLV
        +GHF VYVGE + RY+VP+  L+   FQ+LL + E       D  L +PC   +F+ +  ++
Subjt:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDLV

P0DKL1 Auxin-responsive protein SAUR502.1e-0746Show/hide
Query:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPC
        +GHFVVYVGE + RY+VP+ CL    FQ LL + E       D  +++PC
Subjt:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPC

P32295 Indole-3-acetic acid-induced protein ARG74.7e-0738.81Show/hide
Query:  ASEGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNI-HGGEDGKLMLPCSIQLFEWVLDLVNA
        A +G+  VYVGE  KR+V+P+  L+  +FQ LL+Q E    +    G L +PCS  LF+ +   ++A
Subjt:  ASEGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNI-HGGEDGKLMLPCSIQLFEWVLDLVNA

P33081 Auxin-induced protein 15A2.3e-0637.88Show/hide
Query:  ASEGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNI-HGGEDGKLMLPCSIQLFEWVLDLVN
        A +G+  VYVGE+ KR+V+P+  L+   FQ LL+Q E    +    G L +PCS  +F+ +   +N
Subjt:  ASEGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNI-HGGEDGKLMLPCSIQLFEWVLDLVN

P33083 Auxin-induced protein 6B2.3e-0635.94Show/hide
Query:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNI-HGGEDGKLMLPCSIQLFEWVLDLVN
        +G+  VYVGE+ +R+V+P+  L+   FQ LL+Q E    +   +G L +PCS  +F+ +   +N
Subjt:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNI-HGGEDGKLMLPCSIQLFEWVLDLVN

Arabidopsis top hitse value%identityAlignment
AT1G75580.1 SAUR-like auxin-responsive protein family5.7e-0847.27Show/hide
Query:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLF
        +GHFVVYVGE + RYVVP+  L+   FQ LL Q E       D  L +PC   +F
Subjt:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLF

AT2G21220.1 SAUR-like auxin-responsive protein family7.5e-0837.1Show/hide
Query:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDLV
        +GHF VYVGE++ RY+VP+  L+   F++LL Q E       D  L +PC   +F  +  ++
Subjt:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDLV

AT2G37030.1 SAUR-like auxin-responsive protein family2.0e-0843.55Show/hide
Query:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDLV
        +GH VVYVGEE KR+V+ +  L   +FQALL+Q ++      D +L +PC+   F   LD+V
Subjt:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDLV

AT4G34760.1 SAUR-like auxin-responsive protein family7.5e-0837.1Show/hide
Query:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDLV
        +GHF VYVGE + RY+VP+  L+   FQ+LL + E       D  L +PC   +F+ +  ++
Subjt:  EGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDLV

AT5G66260.1 SAUR-like auxin-responsive protein family2.3e-0937.88Show/hide
Query:  GASEGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDLVN
        G  +GHFVVYVG  + R+V+P+  L+  +FQ LL Q E      +D  L +PC    F  ++  +N
Subjt:  GASEGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDLVN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAGCTTCGGAAGGCCATTTTGTAGTCTATGTGGGGGAAGAGCAAAAACGATATGTTGTTCCATTAAAGTGCTTGTCGTCGATCATGTTTCAAGCATTACTGAACCAATT
TGAAAACAACATTCACGGCGGAGAAGATGGGAAGTTGATGCTACCTTGTTCCATCCAACTATTTGAATGGGTCTTGGATTTGGTGAACGCA
mRNA sequenceShow/hide mRNA sequence
GGAGCTTCGGAAGGCCATTTTGTAGTCTATGTGGGGGAAGAGCAAAAACGATATGTTGTTCCATTAAAGTGCTTGTCGTCGATCATGTTTCAAGCATTACTGAACCAATT
TGAAAACAACATTCACGGCGGAGAAGATGGGAAGTTGATGCTACCTTGTTCCATCCAACTATTTGAATGGGTCTTGGATTTGGTGAACGCA
Protein sequenceShow/hide protein sequence
GASEGHFVVYVGEEQKRYVVPLKCLSSIMFQALLNQFENNIHGGEDGKLMLPCSIQLFEWVLDLVNA