; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013874 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013874
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein Ycf2
Genome locationscaffold607:499259..499366
RNA-Seq ExpressionMS013874
SyntenyMS013874
Gene Ontology termsGO:0009570 - chloroplast stroma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR008543 - Uncharacterised protein family Ycf2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QKY75397.1 Ycf2 [Barnadesia lehmannii]8.7e-0578.95Show/hide
Query:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
        LFTLSI E DLVYHKRFAFSIDSY  D KQF  G FNS
Subjt:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
QRI59470.1 hypothetical chloroplast RF2 [Erigeron breviscapus]1.1e-0478.95Show/hide
Query:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
        LFTLSI E DLVYHKRFAFSIDSY  D KQF  G FNS
Subjt:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
XP_042753123.1 protein Ycf2-like [Lactuca sativa]1.1e-0478.95Show/hide
Query:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
        LFTLSI E DLVYHKRFAFSIDSY  D KQF  G FNS
Subjt:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
YP_004564434.1 hypothetical chloroplast RF21 [Ageratina adenophora]1.1e-0478.95Show/hide
Query:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
        LFTLSI E DLVYHKRFAFSIDSY  D KQF  G FNS
Subjt:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
YP_009374129.1 hypothetical chloroplast RF21 [Diplostephium glandulosum]1.1e-0478.95Show/hide
Query:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
        LFTLSI E DLVYHKRFAFSIDSY  D KQF  G FNS
Subjt:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
TrEMBL top hitse value%identityAlignment
A0A7H0R133 Protein Ycf25.5e-0578.95Show/hide
Query:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
        LFTLSI E DLVYHKRFAFSIDSY  D KQF  G FNS
Subjt:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
A0A7H0TSU1 Protein Ycf25.5e-0578.95Show/hide
Query:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
        LFTLSI E DLVYHKRFAFSIDSY  D KQF  G FNS
Subjt:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
A0A7S7YLJ7 Ycf25.5e-0578.95Show/hide
Query:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
        LFTLSI E DLVYHKRFAFSIDSY  D KQF  G FNS
Subjt:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
A0A7T0CQQ6 Hypothetical chloroplast RF25.5e-0578.95Show/hide
Query:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
        LFTLSI E DLVYHKRFAFSIDSY  D KQF  G FNS
Subjt:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
A0A7T1TTZ0 Hypothetical chloroplast RF215.5e-0578.95Show/hide
Query:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
        LFTLSI E DLVYHKRFAFSIDSY  D KQF  G FNS
Subjt:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
SwissProt top hitse value%identityAlignment
A0A379 Protein Ycf23.7e-0680.65Show/hide
Query:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF
        LFTLSI E DLVYHK FAFSIDSY  D+KQF
Subjt:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF
B1A978 Protein Ycf23.7e-0680.65Show/hide
Query:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF
        LFTLSI E DLVYHK FAFSIDSY  D+KQF
Subjt:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF
B2LMN7 Protein Ycf21.5e-0778.95Show/hide
Query:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
        LFTLSI E DLVYHKRFAFSIDSY  D KQF  G FNS
Subjt:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
Q1KXP6 Protein Ycf21.5e-0778.95Show/hide
Query:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
        LFTLSI E DLVYHKRFAFSIDSY  D KQF  G FNS
Subjt:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
Q332R7 Protein Ycf21.5e-0778.95Show/hide
Query:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
        LFTLSI E DLVYHKRFAFSIDSY  D KQF  G FNS
Subjt:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF--GAFNS
Arabidopsis top hitse value%identityAlignment
ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core5.8e-0777.42Show/hide
Query:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF
        LFTLSI E DLVYHK FAFSIDSY  D++QF
Subjt:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF
ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core5.8e-0777.42Show/hide
Query:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF
        LFTLSI E DLVYHK FAFSIDSY  D++QF
Subjt:  LFTLSIIESDLVYHKRFAFSIDSYKFDEKQF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTATTCACTTTATCAATAATCGAGTCGGATCTGGTGTATCATAAGAGATTCGCATTTTCTATTGATTCCTACAAATTTGATGAAAAACAATTTGGTGCATTCAACTCT
mRNA sequenceShow/hide mRNA sequence
CTATTCACTTTATCAATAATCGAGTCGGATCTGGTGTATCATAAGAGATTCGCATTTTCTATTGATTCCTACAAATTTGATGAAAAACAATTTGGTGCATTCAACTCT
Protein sequenceShow/hide protein sequence
LFTLSIIESDLVYHKRFAFSIDSYKFDEKQFGAFNS