; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013895 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013895
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionmacrophage migration inhibitory factor homolog isoform X1
Genome locationscaffold607:709115..710689
RNA-Seq ExpressionMS013895
SyntenyMS013895
Gene Ontology termsNA
InterPro domainsIPR001398 - Macrophage migration inhibitory factor
IPR014347 - Tautomerase/MIF superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008464235.1 PREDICTED: macrophage migration inhibitory factor homolog isoform X1 [Cucumis melo]8.9e-5490.91Show/hide
Query:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF
        MPCLN+STNV+L+GIDTSSVLSEASSTVA+IIGKPE YVM+VLKGSVPMSFGG+EQPAAYGELVSIGGLNPDVNKKLS A++ ILETKLSVPKSRFFLKF
Subjt:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF

Query:  YDTKAHQSQEYAQCLHALHQN
        YDTKAHQSQEYAQCLHALHQN
Subjt:  YDTKAHQSQEYAQCLHALHQN

XP_011653707.1 macrophage migration inhibitory factor homolog isoform X1 [Cucumis sativus]4.3e-5695.04Show/hide
Query:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF
        MPCLN+STNVNL+GIDTSSVLSEASSTVA+IIGKPEAYVM+VLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAA+S ILETKLSVPKSRFFLKF
Subjt:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF

Query:  YDTKAHQSQEYAQCLHALHQN
        YDTKAHQSQEYAQCLHALHQN
Subjt:  YDTKAHQSQEYAQCLHALHQN

XP_017417274.1 PREDICTED: macrophage migration inhibitory factor homolog isoform X1 [Vigna angularis]1.2e-5389.26Show/hide
Query:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF
        MPCLN+STNVNLDG+DTSS+LSEA+STVA IIGKPEAYVM+VLKGSVP+SFGG+EQPAAYGELVSIGGLNPDVNKKLSAA++ ILETKLSVPKSR+FLKF
Subjt:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF

Query:  YDTKAHQSQEYAQCLHALHQN
        YDTKAHQSQEYAQCLHALHQ+
Subjt:  YDTKAHQSQEYAQCLHALHQN

XP_022925080.1 macrophage migration inhibitory factor homolog isoform X1 [Cucurbita moschata]4.3e-5696.69Show/hide
Query:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF
        MPCLN+STNVNL+GIDTSSVLSEASSTVA+IIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVS ILETKLSVPKSRFFLKF
Subjt:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF

Query:  YDTKAHQSQEYAQCLHALHQN
        YDTKAHQSQEYAQCLHALHQN
Subjt:  YDTKAHQSQEYAQCLHALHQN

XP_022966489.1 macrophage migration inhibitory factor homolog isoform X1 [Cucurbita maxima]1.9e-5697.52Show/hide
Query:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF
        MPCLNVSTNVNL+GIDTSSVLSEASSTVA+IIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVS ILETKLSVPKSRFFLKF
Subjt:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF

Query:  YDTKAHQSQEYAQCLHALHQN
        YDTKAHQSQEYAQCLHALHQN
Subjt:  YDTKAHQSQEYAQCLHALHQN

TrEMBL top hitse value%identityAlignment
A0A0S3RUB9 Uncharacterized protein5.7e-5489.26Show/hide
Query:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF
        MPCLN+STNVNLDG+DTSS+LSEA+STVA IIGKPEAYVM+VLKGSVP+SFGG+EQPAAYGELVSIGGLNPDVNKKLSAA++ ILETKLSVPKSR+FLKF
Subjt:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF

Query:  YDTKAHQSQEYAQCLHALHQN
        YDTKAHQSQEYAQCLHALHQ+
Subjt:  YDTKAHQSQEYAQCLHALHQN

A0A1S3CL47 macrophage migration inhibitory factor homolog isoform X14.3e-5490.91Show/hide
Query:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF
        MPCLN+STNV+L+GIDTSSVLSEASSTVA+IIGKPE YVM+VLKGSVPMSFGG+EQPAAYGELVSIGGLNPDVNKKLS A++ ILETKLSVPKSRFFLKF
Subjt:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF

Query:  YDTKAHQSQEYAQCLHALHQN
        YDTKAHQSQEYAQCLHALHQN
Subjt:  YDTKAHQSQEYAQCLHALHQN

A0A1S3TFF2 macrophage migration inhibitory factor homolog isoform X17.4e-5489.26Show/hide
Query:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF
        MPCLN+STNVNLDG+DTSS+LSEA+STVA IIGKPEAYVM+VLKGSVP+SFGG+EQPAAYGELVSIGGLNPDVNKKLSAA++ ILETKLSVPKSR+FLKF
Subjt:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF

Query:  YDTKAHQSQEYAQCLHALHQN
        YDTKAHQSQEYAQCLHALHQ+
Subjt:  YDTKAHQSQEYAQCLHALHQN

A0A6J1EGW3 macrophage migration inhibitory factor homolog isoform X12.1e-5696.69Show/hide
Query:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF
        MPCLN+STNVNL+GIDTSSVLSEASSTVA+IIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVS ILETKLSVPKSRFFLKF
Subjt:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF

Query:  YDTKAHQSQEYAQCLHALHQN
        YDTKAHQSQEYAQCLHALHQN
Subjt:  YDTKAHQSQEYAQCLHALHQN

A0A6J1HTY3 macrophage migration inhibitory factor homolog isoform X19.3e-5797.52Show/hide
Query:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF
        MPCLNVSTNVNL+GIDTSSVLSEASSTVA+IIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVS ILETKLSVPKSRFFLKF
Subjt:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF

Query:  YDTKAHQSQEYAQCLHALHQN
        YDTKAHQSQEYAQCLHALHQN
Subjt:  YDTKAHQSQEYAQCLHALHQN

SwissProt top hitse value%identityAlignment
O44786 Macrophage migration inhibitory factor homolog3.3e-1137.14Show/hide
Query:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF
        MP   + TN   D I +S+ L +A + V + +GKPE+YV + + G  PM FGGSE P     L SIG + P VN   +  +  +L  +L +PK+R +++ 
Subjt:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF

Query:  YDTKA
         D +A
Subjt:  YDTKA

P81529 Macrophage migration inhibitory factor homolog2.1e-1341Show/hide
Query:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF
        MP   ++TN+    +  S  LS  S+ V  I+ KP +YV V +     +SFGGS +PAA+G L+SIGG+ P  N+  SA + D L  KL +PK+R ++ F
Subjt:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF

P81748 Macrophage migration inhibitory factor homolog8.8e-1235.58Show/hide
Query:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF
        MP    STNV  + I     L   S  +A ++GKPE+YV V + G   ++FGG++ PA +G+L+S+GG+  + N+  SA +   L   L +P +R ++ F
Subjt:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF

Query:  YDTK
         D +
Subjt:  YDTK

P91850 Macrophage migration inhibitory factor homolog6.1e-1339.05Show/hide
Query:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF
        MP   + TN+  + I +S+ L +AS+ VA+ +GKPE+YV + + G   M FGGSE P A   L SIG + P VN   +  +  +L  +L +PK+R +++F
Subjt:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF

Query:  YDTKA
         D +A
Subjt:  YDTKA

Q02960 Macrophage migration inhibitory factor4.5e-0833.33Show/hide
Query:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF
        MP   + TNV  D +   S+L E +  +A+  GKP  Y+ V +     MSFGGS  P A   L SIG +    NK  +  + D++   L V   R ++ +
Subjt:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF

Query:  YDTKA
        +D  A
Subjt:  YDTKA

Arabidopsis top hitse value%identityAlignment
AT3G51660.1 Tautomerase/MIF superfamily protein1.1e-2249.02Show/hide
Query:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF
        MPCL ++TNVN DG++T    SE +  VA I+G+P+  VMVVLKGSV + FGG+++ AAY E+VS+GG+   V ++L A V  IL T  S+  +RF  K 
Subjt:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF

Query:  YD
        +D
Subjt:  YD

AT5G01650.1 Tautomerase/MIF superfamily protein5.1e-4790.38Show/hide
Query:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF
        MPCLN+STNVNLDG+DTSS+LSEASSTVA+IIGKPE YVM+VLKGSVPMSFGG+E PAAYGELVSIGGLN DVNKKLSAAVS ILETKLSVPKSRFFLKF
Subjt:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF

Query:  YDTK
        YDTK
Subjt:  YDTK

AT5G01650.2 Tautomerase/MIF superfamily protein2.1e-5690.08Show/hide
Query:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF
        MPCLN+STNVNLDG+DTSS+LSEASSTVA+IIGKPE YVM+VLKGSVPMSFGG+E PAAYGELVSIGGLN DVNKKLSAAVS ILETKLSVPKSRFFLKF
Subjt:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF

Query:  YDTKAHQSQEYAQCLHALHQN
        YDTK HQSQEYAQCLHALHQ+
Subjt:  YDTKAHQSQEYAQCLHALHQN

AT5G57170.1 Tautomerase/MIF superfamily protein2.1e-2956.31Show/hide
Query:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF
        MP LN+ TN+ +D +  S +L +A+  VA+IIGKPE+YVM++L   VP++F G+E+PAAYGEL+SIGGL P VN KLS  +S+IL+ KLS+  SRF++KF
Subjt:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF

Query:  YDT
        YD+
Subjt:  YDT

AT5G57170.2 Tautomerase/MIF superfamily protein2.1e-2956.31Show/hide
Query:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF
        MP LN+ TN+ +D +  S +L +A+  VA+IIGKPE+YVM++L   VP++F G+E+PAAYGEL+SIGGL P VN KLS  +S+IL+ KLS+  SRF++KF
Subjt:  MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKF

Query:  YDT
        YD+
Subjt:  YDT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTGCCTTAACGTTTCCACCAATGTCAACCTCGATGGTATCGACACCTCCTCCGTTCTCTCCGAGGCTTCATCCACCGTTGCCGAGATCATCGGCAAACCAGAGGC
TTATGTGATGGTTGTGCTGAAGGGATCAGTACCCATGTCATTTGGTGGCAGTGAGCAGCCAGCAGCTTATGGCGAGTTGGTGTCCATTGGTGGCCTGAACCCTGATGTCA
ACAAAAAACTGAGCGCTGCAGTTTCTGATATTCTCGAGACCAAGTTGTCCGTGCCCAAGTCAAGATTCTTCCTCAAATTTTACGACACTAAGGCCCATCAGAGTCAAGAA
TATGCACAGTGTTTACATGCTTTACACCAGAAC
mRNA sequenceShow/hide mRNA sequence
ATGCCGTGCCTTAACGTTTCCACCAATGTCAACCTCGATGGTATCGACACCTCCTCCGTTCTCTCCGAGGCTTCATCCACCGTTGCCGAGATCATCGGCAAACCAGAGGC
TTATGTGATGGTTGTGCTGAAGGGATCAGTACCCATGTCATTTGGTGGCAGTGAGCAGCCAGCAGCTTATGGCGAGTTGGTGTCCATTGGTGGCCTGAACCCTGATGTCA
ACAAAAAACTGAGCGCTGCAGTTTCTGATATTCTCGAGACCAAGTTGTCCGTGCCCAAGTCAAGATTCTTCCTCAAATTTTACGACACTAAGGCCCATCAGAGTCAAGAA
TATGCACAGTGTTTACATGCTTTACACCAGAAC
Protein sequenceShow/hide protein sequence
MPCLNVSTNVNLDGIDTSSVLSEASSTVAEIIGKPEAYVMVVLKGSVPMSFGGSEQPAAYGELVSIGGLNPDVNKKLSAAVSDILETKLSVPKSRFFLKFYDTKAHQSQE
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