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MS013908 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013908
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionkinetochore protein SPC24 homolog
Genome locationscaffold607:779004..779894
RNA-Seq ExpressionMS013908
SyntenyMS013908
Gene Ontology termsGO:0051983 - regulation of chromosome segregation (biological process)
InterPro domainsIPR013252 - Kinetochore-Ndc80 subunit Spc24
IPR044951 - Kinetochore protein SPC24-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603567.1 Kinetochore protein SPC24-like protein, partial [Cucurbita argyrosperma subsp. sororia]3.3e-4186.27Show/hide
Query:  MHLFFINTLVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMIN
        MHL F+NT++TSEIN+LD QRISVQERKQAMKKLEQQELR QRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQ+FE DPT  S+FDICN IW+MIN
Subjt:  MHLFFINTLVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMIN

Query:  SP
        SP
Subjt:  SP

XP_022144074.1 uncharacterized protein LOC111013852 isoform X1 [Momordica charantia]3.5e-43100Show/hide
Query:  LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMINSP
        LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMINSP
Subjt:  LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMINSP

XP_022144075.1 uncharacterized protein LOC111013852 isoform X2 [Momordica charantia]3.5e-43100Show/hide
Query:  LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMINSP
        LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMINSP
Subjt:  LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMINSP

XP_022966574.1 uncharacterized protein LOC111466216 [Cucurbita maxima]2.0e-3891.49Show/hide
Query:  LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMINSP
        LVT++INELD QRISVQERKQA KKLEQQELRAQRKLSMYASVTDIIPNMDD SKISGHIVDRNKRVVQKFELDPTKTS+FDICN IW+MINSP
Subjt:  LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMINSP

XP_023518318.1 uncharacterized protein LOC111781837 [Cucurbita pepo subsp. pepo]9.9e-3890.43Show/hide
Query:  LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMINSP
        LVT++INELD QRISVQERKQA KKLEQQELRAQRKLSMYASVTDIIPNMDD SKISGHIVDRNKRVVQKFELDPTK S+FDICN IW+MINSP
Subjt:  LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMINSP

TrEMBL top hitse value%identityAlignment
A0A0A0KXM7 Uncharacterized protein1.5e-3983.33Show/hide
Query:  MHLFFINTLVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMIN
        M L F NTLVT+EINEL+C+R+SVQERKQAMKKLEQQEL AQRKLSMYASVTDIIPNM+DQSKISGHIVDRNKRVVQKFE DP K S+FD CN +W+MIN
Subjt:  MHLFFINTLVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMIN

Query:  SP
        SP
Subjt:  SP

A0A6J1CQL9 uncharacterized protein LOC111013852 isoform X21.7e-43100Show/hide
Query:  LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMINSP
        LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMINSP
Subjt:  LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMINSP

A0A6J1CR83 uncharacterized protein LOC111013852 isoform X11.7e-43100Show/hide
Query:  LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMINSP
        LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMINSP
Subjt:  LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMINSP

A0A6J1HU69 uncharacterized protein LOC1114662169.7e-3991.49Show/hide
Query:  LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMINSP
        LVT++INELD QRISVQERKQA KKLEQQELRAQRKLSMYASVTDIIPNMDD SKISGHIVDRNKRVVQKFELDPTKTS+FDICN IW+MINSP
Subjt:  LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMINSP

A0A6J1IPN8 uncharacterized protein LOC1114783202.4e-3787.23Show/hide
Query:  LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMINSP
        ++TSEIN+LD QRISVQERKQAMKKLEQQELR QRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQ+FE DPT  S+FDICN IW+MINSP
Subjt:  LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMINSP

SwissProt top hitse value%identityAlignment
Q67XT3 Kinetochore protein SPC24 homolog1.0e-2151.09Show/hide
Query:  LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMIN
        LV  E+ +L+ Q  S+ E KQ+ K+  + +LRA++KLSMYASVT++IP++DD SKISG++VDR KR+++KF+ +  K +A++ CNSIW +IN
Subjt:  LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMIN

Arabidopsis top hitse value%identityAlignment
AT3G08880.1 unknown protein7.3e-2351.09Show/hide
Query:  LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMIN
        LV  E+ +L+ Q  S+ E KQ+ K+  + +LRA++KLSMYASVT++IP++DD SKISG++VDR KR+++KF+ +  K +A++ CNSIW +IN
Subjt:  LVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMIN

AT5G01570.1 unknown protein2.0e-1248.57Show/hide
Query:  QERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTK-TSAFDICN
        +E + A+K+ ++ +LR + KL MYASVT +IPN+DD  K SG++V R+KR++ KFE D  K TS ++ CN
Subjt:  QERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTK-TSAFDICN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCTGTTTTTCATCAACACACTTGTCACCAGTGAGATTAATGAACTAGACTGCCAAAGGATTTCTGTTCAAGAAAGGAAGCAGGCGATGAAGAAACTTGAGCAACA
AGAACTTAGAGCTCAGAGGAAGCTTTCAATGTATGCTTCGGTCACTGATATAATTCCAAACATGGATGATCAGTCTAAAATTTCTGGCCATATTGTGGATAGAAACAAAA
GGGTGGTGCAGAAGTTCGAATTGGACCCGACTAAGACATCTGCTTTTGATATATGCAATAGCATTTGGGATATGATTAATTCCCCT
mRNA sequenceShow/hide mRNA sequence
ATGCATCTGTTTTTCATCAACACACTTGTCACCAGTGAGATTAATGAACTAGACTGCCAAAGGATTTCTGTTCAAGAAAGGAAGCAGGCGATGAAGAAACTTGAGCAACA
AGAACTTAGAGCTCAGAGGAAGCTTTCAATGTATGCTTCGGTCACTGATATAATTCCAAACATGGATGATCAGTCTAAAATTTCTGGCCATATTGTGGATAGAAACAAAA
GGGTGGTGCAGAAGTTCGAATTGGACCCGACTAAGACATCTGCTTTTGATATATGCAATAGCATTTGGGATATGATTAATTCCCCT
Protein sequenceShow/hide protein sequence
MHLFFINTLVTSEINELDCQRISVQERKQAMKKLEQQELRAQRKLSMYASVTDIIPNMDDQSKISGHIVDRNKRVVQKFELDPTKTSAFDICNSIWDMINSP