CuGenDBv2

Gene ID	MS013919
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Late embryogenesis abundant B19.3
Genome location	scaffold607:879185..879654
RNA-Seq Expression	MS013919
Synteny	MS013919
Gene Ontology terms	GO:0009737 - response to abscisic acid (biological process)
InterPro domains	IPR000389 - Small hydrophilic plant seed protein IPR022377 - Small hydrophilic plant seed protein, conserved site IPR038956 - Late embryogenesis abundant protein, LEA_5 subgroup

Homology

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GenBank top hits

e value

%identity

Alignment

TYK29241.1 protein SLE1 [Cucumis melo var. makuwa]

2.3e-37

78.76

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Query:  MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGT------DRANEEG
        MAS+QQR++LDAKAKQGETVVPGGTGGKSLDAQERLAEGRS+GGQTRKEQLGHEGYQE+G +GGE R+EQMG EGYQEMGRKGGL T      +RA EEG
Subjt:  MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGT------DRANEEG

Query:  IQIDESKFRTKDK
        I+IDES+F TK++
Subjt:  IQIDESKFRTKDK

XP_022144081.1 carrot ABA-induced in somatic embryos 3-like [Momordica charantia]

2.9e-48

100

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Query:  MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGTDRANEEGIQIDES
        MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGTDRANEEGIQIDES
Subjt:  MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGTDRANEEGIQIDES

Query:  KFRTKDK
        KFRTKDK
Subjt:  KFRTKDK

XP_022949995.1 carrot ABA-induced in somatic embryos 3 [Cucurbita moschata]

1.2e-38

80.53

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Query:  MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGT------DRANEEG
        MA++Q+R++L+AKAKQGETVVPGGTGGKSL+AQERLAEGRSRGGQTRKEQLGHEGYQEMG RGGETRREQMG EGYQEMG+KGGL T      +R  EEG
Subjt:  MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGT------DRANEEG

Query:  IQIDESKFRTKDK
        I+IDESKFRTKD+
Subjt:  IQIDESKFRTKDK

XP_022978321.1 carrot ABA-induced in somatic embryos 3 [Cucurbita maxima]

6.1e-38

79.65

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Query:  MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGT------DRANEEG
        MA++Q+R++L+AKAKQGETVVPGGTGGKSL+AQERLAEGRSRGGQTRKEQLG+EGYQEMG RGGETRREQMG EGYQEMG+KGGL T      +R  EEG
Subjt:  MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGT------DRANEEG

Query:  IQIDESKFRTKDK
        I+IDESKFRTKD+
Subjt:  IQIDESKFRTKDK

XP_038883209.1 protein SLE1-like [Benincasa hispida]

3.6e-38

80.53

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Query:  MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGT------DRANEEG
        MAS+Q+R++LDAKAKQGETVVPGGTGGKSL+AQERLAEGRSRGGQTRKEQLG EGYQE+G +GGE RREQ+GHEGYQEMGRKGGL T      +RA EEG
Subjt:  MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGT------DRANEEG

Query:  IQIDESKFRTKDK
        I+IDESKFRTKD+
Subjt:  IQIDESKFRTKDK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T8F9 Protein SLE1

2.5e-37

77.88

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Query:  MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGT------DRANEEG
        MAS+QQR++LDAKAKQGETVVPGGTGGKSLDAQERLAEGRS+GGQTRKEQLGHEGY+E+G +GGE R+EQMG EGYQEMGRKGGL T      +RA EEG
Subjt:  MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGT------DRANEEG

Query:  IQIDESKFRTKDK
        I+IDES+F TK++
Subjt:  IQIDESKFRTKDK

A0A5D3E0M2 Protein SLE1

1.1e-37

78.76

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Query:  MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGT------DRANEEG
        MAS+QQR++LDAKAKQGETVVPGGTGGKSLDAQERLAEGRS+GGQTRKEQLGHEGYQE+G +GGE R+EQMG EGYQEMGRKGGL T      +RA EEG
Subjt:  MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGT------DRANEEG

Query:  IQIDESKFRTKDK
        I+IDES+F TK++
Subjt:  IQIDESKFRTKDK

A0A6J1CS94 carrot ABA-induced in somatic embryos 3-like

1.4e-48

100

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Query:  MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGTDRANEEGIQIDES
        MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGTDRANEEGIQIDES
Subjt:  MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGTDRANEEGIQIDES

Query:  KFRTKDK
        KFRTKDK
Subjt:  KFRTKDK

A0A6J1GDL3 carrot ABA-induced in somatic embryos 3

5.9e-39

80.53

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Query:  MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGT------DRANEEG
        MA++Q+R++L+AKAKQGETVVPGGTGGKSL+AQERLAEGRSRGGQTRKEQLGHEGYQEMG RGGETRREQMG EGYQEMG+KGGL T      +R  EEG
Subjt:  MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGT------DRANEEG

Query:  IQIDESKFRTKDK
        I+IDESKFRTKD+
Subjt:  IQIDESKFRTKDK

A0A6J1IMD5 carrot ABA-induced in somatic embryos 3

2.9e-38

79.65

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Query:  MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGT------DRANEEG
        MA++Q+R++L+AKAKQGETVVPGGTGGKSL+AQERLAEGRSRGGQTRKEQLG+EGYQEMG RGGETRREQMG EGYQEMG+KGGL T      +R  EEG
Subjt:  MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGT------DRANEEG

Query:  IQIDESKFRTKDK
        I+IDESKFRTKD+
Subjt:  IQIDESKFRTKDK

SwissProt top hits

e value

%identity

Alignment

I1N2Z5 Protein SLE1

7.2e-34

73.64

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Query:  MASEQ-QRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGT------DRANEE
        M S+Q  R +LD KA+QGETVVPGGTGGKSL+AQE LAEGRSRGGQTRK+QLG EGY EMG +GG+TR+EQMG EGYQEMGRKGGL T      +RA EE
Subjt:  MASEQ-QRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGT------DRANEE

Query:  GIQIDESKFR
        GI+IDESKF+
Subjt:  GIQIDESKFR

Q02400 Late embryogenesis abundant protein B19.3

1.7e-30

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Query:  ASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQ--------------------TRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGR
        + +Q+R++LD  A++GETVVPGGTGGK+L+AQE LAEGRSRGGQ                    TRKEQLG EGY+EMG +GGETR+EQMG EGY EMGR
Subjt:  ASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQ--------------------TRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGR

Query:  KGGLGT------DRANEEGIQIDESKFRTK
        KGGL T      +RA  EGI IDESKF+TK
Subjt:  KGGLGT------DRANEEGIQIDESKFRTK

Q05191 Late embryogenesis abundant protein B19.4

2.7e-28

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Query:  ASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQ----------------------------------------TRKEQLGHEGYQEMGQ
        + +Q+R++LD  A++GETVVPGGTGGK+L+AQE LAEGRSRGGQ                                        TRKEQLG EGY+EMG 
Subjt:  ASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQ----------------------------------------TRKEQLGHEGYQEMGQ

Query:  RGGETRREQMGHEGYQEMGRKGGLGT------DRANEEGIQIDESKFRTK
        +GGETR+EQMG EGY+EMGRKGGL T      +RA  EGI IDESKF+TK
Subjt:  RGGETRREQMGHEGYQEMGRKGGLGT------DRANEEGIQIDESKFRTK

Q07187 Em-like protein GEA1

6.3e-30

55.26

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Query:  MASEQ-QRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQT----------------------------------------RKEQLGHEGYQEM
        MAS+Q  R +LD KAKQGETVVPGGTGG SL+AQE LAEGRS+GGQT                                        RKEQLGHEGYQEM
Subjt:  MASEQ-QRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQT----------------------------------------RKEQLGHEGYQEM

Query:  GQRGGETRREQMGHEGYQEMGRKGGLGT------DRANEEGIQIDESKFRTK
        G +GGE R+EQ+GHEGY+EMGRKGGL T      +RA EEGI+IDESKF  K
Subjt:  GQRGGETRREQMGHEGYQEMGRKGGLGT------DRANEEGIQIDESKFRTK

Q5KTS7 Carrot ABA-induced in somatic embryos 3

1.1e-34

71.82

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Query:  ASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGL------GTDRANEEGI
        + +++R++LDA+AKQGETVVPGGTGGKSL+AQE LAEGRS+GG TRKEQLG EGYQE+G +GGETRREQMG EGY++MGR GGL      G +RA EEGI
Subjt:  ASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGL------GTDRANEEGI

Query:  QIDESKFRTK
         ID+SKFRTK
Subjt:  QIDESKFRTK

Arabidopsis top hits

e value

%identity

Alignment

AT2G40170.1 Stress induced protein

8.2e-25

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Query:  MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGTDRANEEGIQIDES
        MAS+Q++  LD +AK+GETVVPGGTGGKS +AQ+ LAEGRSRGGQTRKEQLG EGYQ+MG++GG +  ++ G E               A EEG++IDES
Subjt:  MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGTDRANEEGIQIDES

Query:  KFRTK
        KFRTK
Subjt:  KFRTK

AT3G51810.1 Stress induced protein

4.5e-31

55.26

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Query:  MASEQ-QRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQT----------------------------------------RKEQLGHEGYQEM
        MAS+Q  R +LD KAKQGETVVPGGTGG SL+AQE LAEGRS+GGQT                                        RKEQLGHEGYQEM
Subjt:  MASEQ-QRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQT----------------------------------------RKEQLGHEGYQEM

Query:  GQRGGETRREQMGHEGYQEMGRKGGLGT------DRANEEGIQIDESKFRTK
        G +GGE R+EQ+GHEGY+EMGRKGGL T      +RA EEGI+IDESKF  K
Subjt:  GQRGGETRREQMGHEGYQEMGRKGGLGT------DRANEEGIQIDESKFRTK

Sequences

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CDS sequence

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ATGGCATCGGAACAGCAACGAGCGGATCTCGACGCAAAAGCAAAGCAGGGAGAGACGGTGGTTCCCGGCGGAACCGGCGGCAAAAGCCTCGATGCTCAAGAACGCCTCGC
TGAAGGGCGGAGCCGGGGAGGGCAGACGAGGAAGGAGCAGCTGGGCCACGAAGGGTATCAGGAGATGGGCCAGCGCGGGGGAGAGACCCGGAGGGAGCAGATGGGCCACG
AGGGCTACCAAGAAATGGGCCGCAAAGGAGGCCTCGGCACCGACCGGGCCAACGAGGAAGGGATCCAGATCGACGAGTCCAAGTTCCGGACCAAGGACAAG

mRNA sequence

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Protein sequence

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MASEQQRADLDAKAKQGETVVPGGTGGKSLDAQERLAEGRSRGGQTRKEQLGHEGYQEMGQRGGETRREQMGHEGYQEMGRKGGLGTDRANEEGIQIDESKFRTKDK

MS013919 (gene) of Bitter gourd (TR) v1 genome