CuGenDBv2

Gene ID	MS013920
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	protein EMB-1-like
Genome location	scaffold607:883313..884066
RNA-Seq Expression	MS013920
Synteny	MS013920
Gene Ontology terms	GO:0009737 - response to abscisic acid (biological process) GO:0048700 - acquisition of desiccation tolerance in seed (biological process)
InterPro domains	IPR000389 - Small hydrophilic plant seed protein IPR022377 - Small hydrophilic plant seed protein, conserved site IPR038956 - Late embryogenesis abundant protein, LEA_5 subgroup

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7033764.1 Em-like protein GEA1, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.2e-38

94.51

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Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK
        MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MGRKGGLSN+G+ GGERAAEEGVEIDESKFR K
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK

XP_004148611.1 protein EMB-1 [Cucumis sativus]

4.4e-37

93.41

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Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK
        MSSEQER +LDARARQGETV+PGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MGRKGGLSNTG+SGGERAAEEGVEIDESKFR K
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK

XP_008464209.1 PREDICTED: protein EMB-1-like [Cucumis melo]

1.5e-37

95.6

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Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK
        MSSEQER ELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MGRKGGLSNTG+SGGERAAEEGVEIDESKF TK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK

XP_022144068.1 protein EMB-1-like [Momordica charantia]

3.2e-40

100

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Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK
        MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK

XP_022949998.1 protein EMB-1 [Cucurbita moschata]

5.2e-38

94.51

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Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK
        MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MGRKGGLSN+G+ GGERAAEEGVEIDESKFR K
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CKY4 protein EMB-1-like

7.3e-38

95.6

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Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK
        MSSEQER ELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MGRKGGLSNTG+SGGERAAEEGVEIDESKF TK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK

A0A5D3E041 Protein EMB-1-like

7.3e-38

95.6

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Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK
        MSSEQER ELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MGRKGGLSNTG+SGGERAAEEGVEIDESKF TK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK

A0A6J1CSC5 protein EMB-1-like

1.6e-40

100

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Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK
        MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK

A0A6J1GDN9 protein EMB-1

2.5e-38

94.51

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Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK
        MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MGRKGGLSN+G+ GGERAAEEGVEIDESKFR K
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK

A0A6J1ISS4 protein EMB-1

2.5e-38

94.51

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Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK
        MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ+MGRKGGLSN+G+ GGERAAEEGVEIDESKFR K
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK

SwissProt top hits

e value

%identity

Alignment

P04568 Em protein

2.2e-31

76.67

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Query:  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK
        S +QER +LD +AR+GETVVPGGTGGKSLEAQE+LAEGRSRGGQTR+EQ+G EGY QMGRKGGLS    SGG+RAA EG++IDESKF+TK
Subjt:  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK

P17639 Protein EMB-1

7.3e-35

82.42

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Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK
        M+S+QE+ ELDARARQGETVVPGGTGGKSLEAQ+HLAEGRS+GGQTRKEQLG EGY +MGRKGGLSN  +SGGERA +EG++IDESKFRTK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK

P42755 Em protein H5

2.6e-32

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Query:  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK
        S +QER ELD  AR+GETVVPGGTGGKSLEAQEHLA+GRSRGG+TRKEQLG EGY++MGRKGGLS    SGGERAA EG+EIDESKF+TK
Subjt:  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK

Q02973 Em-like protein GEA6

3.4e-32

80.22

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Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK
        M+S+QE+ +LD RA++GETVVPGGTGGKS EAQ+HLAEGRSRGGQTRKEQLG EGYQQMGRKGGLS     GGE A EEGVEIDESKFRTK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK

Q05190 Late embryogenesis abundant protein B19.1A

3.7e-31

75.56

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Query:  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK
        S +QER +LD +AR+GETVVPGGTGGKSLEAQ++LAEGRSRGGQTR+EQ+G EGY +MGRKGGLS+   SGGERAA EG++IDESKF+TK
Subjt:  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK

Arabidopsis top hits

e value

%identity

Alignment

AT2G40170.1 Stress induced protein

2.4e-33

80.22

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Query:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK
        M+S+QE+ +LD RA++GETVVPGGTGGKS EAQ+HLAEGRSRGGQTRKEQLG EGYQQMGRKGGLS     GGE A EEGVEIDESKFRTK
Subjt:  MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK

AT3G51810.1 Stress induced protein

4.5e-24

47.33

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Query:  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ--------------------------------------------
        S +  R ELD +A+QGETVVPGGTGG SLEAQEHLAEGRS+GGQTRKEQLGHEGYQ                                            
Subjt:  SSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQ--------------------------------------------

Query:  ----------------QMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK
                        +MGRKGGLS    SGGERA EEG+EIDESKF  K
Subjt:  ----------------QMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK

Sequences

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CDS sequence

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ATGTCGTCGGAGCAGGAGAGGTGTGAACTCGACGCCAGGGCCAGGCAAGGGGAGACTGTCGTCCCTGGTGGAACTGGGGGCAAGAGTCTCGAAGCTCAGGAACACCTCGC
TGAAGGGCGGAGCCGTGGGGGGCAGACAAGGAAGGAGCAGCTGGGCCACGAAGGGTACCAACAGATGGGCCGCAAAGGAGGGCTAAGCAACACGGGTCTCTCGGGCGGAG
AGCGCGCTGCCGAGGAAGGCGTTGAGATTGATGAGTCCAAATTCAGGACCAAA

mRNA sequence

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Protein sequence

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MSSEQERCELDARARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGHEGYQQMGRKGGLSNTGLSGGERAAEEGVEIDESKFRTK

MS013920 (gene) of Bitter gourd (TR) v1 genome