; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013936 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013936
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold607:1062710..1063300
RNA-Seq ExpressionMS013936
SyntenyMS013936
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN54372.1 hypothetical protein Csa_017974 [Cucumis sativus]6.5e-7083.07Show/hide
Query:  EEEEEVPRFIDPEDQKERIRQILKYQKSVYSFSSSSSSSSTSSSSAKSLRSSSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPMIKPIPLWGSDSD
        EEEE+VPRFIDPE QKERIRQILKYQKSVY    SSSSSS SSSS  S R SSLLDLMKAGNTSLRRLF+MQHTSLATYF KYSGSPMIK IPLWGSDSD
Subjt:  EEEEEVPRFIDPEDQKERIRQILKYQKSVYSFSSSSSSSSTSSSSAKSLRSSSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPMIKPIPLWGSDSD

Query:  VEICDAWASIKIGLSRDSGSHRTNCTSNGSFIGRKIGSQNSTIRVSKPKLTRKKSFRKLPRFGLLWRSWRFRVRFRLRRLRIMICGKIF
        VEI DAWAS+KIGLS DSGSH TNCTS G  I RK G  NSTI VSK KLTRKKSFRKLPRF LLW S RFRVRFRLRRLRI+ICGK F
Subjt:  VEICDAWASIKIGLSRDSGSHRTNCTSNGSFIGRKIGSQNSTIRVSKPKLTRKKSFRKLPRFGLLWRSWRFRVRFRLRRLRIMICGKIF

XP_022950112.1 uncharacterized protein LOC111453292 isoform X1 [Cucurbita moschata]4.7e-6882.26Show/hide
Query:  MSGAEITEEEEEEVPRFIDPEDQKERIRQILKYQKSVYSFSSSSSSSSTS--SSSAKSLRSSSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPMIK
        MS +E+T EEEEEV +FIDPE QKERIRQILKYQKSVYS SSSSSSSS+S  S+SA S RS SLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSP IK
Subjt:  MSGAEITEEEEEEVPRFIDPEDQKERIRQILKYQKSVYSFSSSSSSSSTS--SSSAKSLRSSSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPMIK

Query:  PIPLWGSDSDVEICDAWASIKIGLSRDSGSHRTNCTSNGSFIGRKIGSQNSTIRVSKPKLTRKKSFRKLPRFGLLWRSWRFRVRFR
        PIPLWGSDSDVEICDAWASIKIGLS DS S  TNCTSNG F+ R  G +NST+RV+K KLTRKKSFRKLP FGLLWRS RFRVR R
Subjt:  PIPLWGSDSDVEICDAWASIKIGLSRDSGSHRTNCTSNGSFIGRKIGSQNSTIRVSKPKLTRKKSFRKLPRFGLLWRSWRFRVRFR

XP_022950113.1 uncharacterized protein LOC111453292 isoform X2 [Cucurbita moschata]6.3e-7382.65Show/hide
Query:  MSGAEITEEEEEEVPRFIDPEDQKERIRQILKYQKSVYSFSSSSSSSSTS--SSSAKSLRSSSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPMIK
        MS +E+T EEEEEV +FIDPE QKERIRQILKYQKSVYS SSSSSSSS+S  S+SA S RS SLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSP IK
Subjt:  MSGAEITEEEEEEVPRFIDPEDQKERIRQILKYQKSVYSFSSSSSSSSTS--SSSAKSLRSSSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPMIK

Query:  PIPLWGSDSDVEICDAWASIKIGLSRDSGSHRTNCTSNGSFIGRKIGSQNSTIRVSKPKLTRKKSFRKLPRFGLLWRSWRFRVRFRLRRLRIMICG
        PIPLWGSDSDVEICDAWASIKIGLS DS S  TNCTSNG F+ R  G +NST+RV+K KLTRKKSFRKLP FGLLWRS RFRVR R RRLRIMICG
Subjt:  PIPLWGSDSDVEICDAWASIKIGLSRDSGSHRTNCTSNGSFIGRKIGSQNSTIRVSKPKLTRKKSFRKLPRFGLLWRSWRFRVRFRLRRLRIMICG

XP_022978287.1 uncharacterized protein LOC111478319 isoform X2 [Cucurbita maxima]2.5e-6980.93Show/hide
Query:  MSGAEITEEEEEEVPRFIDPEDQKERIRQILKYQKSVYSFSSSSSSSSTSSSSAKSLRSSSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPMIKPI
        MS +EIT EEEEEV +FIDPE Q+ERIRQILKYQKSVY  SSSSSSSS+ S+SA S RS SLLDLMKAGN SLRRLFDMQHTSLATYFDKYSGSP IKPI
Subjt:  MSGAEITEEEEEEVPRFIDPEDQKERIRQILKYQKSVYSFSSSSSSSSTSSSSAKSLRSSSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPMIKPI

Query:  PLWGSDSDVEICDAWASIKIGLSRDSGSHRTNCTSNGSFIGRKIGSQNSTIRVSKPKLTRKKSFRKLPRFGLLWRSWRFRVRFRLRRLRIMICG
        PLWGSDSDVEICDAWASIKIG S DS S  TNCTSNG F+ R  G +NST+RV+K KLTRKKSFRKLP FGLLWRS RFRVR R R LRIMICG
Subjt:  PLWGSDSDVEICDAWASIKIGLSRDSGSHRTNCTSNGSFIGRKIGSQNSTIRVSKPKLTRKKSFRKLPRFGLLWRSWRFRVRFRLRRLRIMICG

XP_023543295.1 serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X2 [Cucurbita pepo subsp. pepo]4.1e-7281Show/hide
Query:  MSGAEITEEEEEEVPRFIDPEDQKERIRQILKYQKSVYSFSSSSSSSSTSSS------SAKSLRSSSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGS
        MS +EIT E+EEEV +FIDPE QKERIRQILKYQKSVYS SSSSSSSS+SSS      SA S RS SLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGS
Subjt:  MSGAEITEEEEEEVPRFIDPEDQKERIRQILKYQKSVYSFSSSSSSSSTSSS------SAKSLRSSSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGS

Query:  PMIKPIPLWGSDSDVEICDAWASIKIGLSRDSGSHRTNCTSNGSFIGRKIGSQNSTIRVSKPKLTRKKSFRKLPRFGLLWRSWRFRVRFRLRRLRIMICG
        P IKPIPLWGSDSDVE CDAWASIKIGLS DS S  TNCTSNG F+ R  G +NST+RV+K KLTRKKSFRKLP FGLLWRS RFRVR R RRLRIMICG
Subjt:  PMIKPIPLWGSDSDVEICDAWASIKIGLSRDSGSHRTNCTSNGSFIGRKIGSQNSTIRVSKPKLTRKKSFRKLPRFGLLWRSWRFRVRFRLRRLRIMICG

TrEMBL top hitse value%identityAlignment
A0A0A0L1A7 Uncharacterized protein3.1e-7083.07Show/hide
Query:  EEEEEVPRFIDPEDQKERIRQILKYQKSVYSFSSSSSSSSTSSSSAKSLRSSSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPMIKPIPLWGSDSD
        EEEE+VPRFIDPE QKERIRQILKYQKSVY    SSSSSS SSSS  S R SSLLDLMKAGNTSLRRLF+MQHTSLATYF KYSGSPMIK IPLWGSDSD
Subjt:  EEEEEVPRFIDPEDQKERIRQILKYQKSVYSFSSSSSSSSTSSSSAKSLRSSSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPMIKPIPLWGSDSD

Query:  VEICDAWASIKIGLSRDSGSHRTNCTSNGSFIGRKIGSQNSTIRVSKPKLTRKKSFRKLPRFGLLWRSWRFRVRFRLRRLRIMICGKIF
        VEI DAWAS+KIGLS DSGSH TNCTS G  I RK G  NSTI VSK KLTRKKSFRKLPRF LLW S RFRVRFRLRRLRI+ICGK F
Subjt:  VEICDAWASIKIGLSRDSGSHRTNCTSNGSFIGRKIGSQNSTIRVSKPKLTRKKSFRKLPRFGLLWRSWRFRVRFRLRRLRIMICGKIF

A0A6J1GDW9 uncharacterized protein LOC111453292 isoform X12.3e-6882.26Show/hide
Query:  MSGAEITEEEEEEVPRFIDPEDQKERIRQILKYQKSVYSFSSSSSSSSTS--SSSAKSLRSSSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPMIK
        MS +E+T EEEEEV +FIDPE QKERIRQILKYQKSVYS SSSSSSSS+S  S+SA S RS SLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSP IK
Subjt:  MSGAEITEEEEEEVPRFIDPEDQKERIRQILKYQKSVYSFSSSSSSSSTS--SSSAKSLRSSSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPMIK

Query:  PIPLWGSDSDVEICDAWASIKIGLSRDSGSHRTNCTSNGSFIGRKIGSQNSTIRVSKPKLTRKKSFRKLPRFGLLWRSWRFRVRFR
        PIPLWGSDSDVEICDAWASIKIGLS DS S  TNCTSNG F+ R  G +NST+RV+K KLTRKKSFRKLP FGLLWRS RFRVR R
Subjt:  PIPLWGSDSDVEICDAWASIKIGLSRDSGSHRTNCTSNGSFIGRKIGSQNSTIRVSKPKLTRKKSFRKLPRFGLLWRSWRFRVRFR

A0A6J1GDZ9 uncharacterized protein LOC111453292 isoform X23.0e-7382.65Show/hide
Query:  MSGAEITEEEEEEVPRFIDPEDQKERIRQILKYQKSVYSFSSSSSSSSTS--SSSAKSLRSSSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPMIK
        MS +E+T EEEEEV +FIDPE QKERIRQILKYQKSVYS SSSSSSSS+S  S+SA S RS SLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSP IK
Subjt:  MSGAEITEEEEEEVPRFIDPEDQKERIRQILKYQKSVYSFSSSSSSSSTS--SSSAKSLRSSSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPMIK

Query:  PIPLWGSDSDVEICDAWASIKIGLSRDSGSHRTNCTSNGSFIGRKIGSQNSTIRVSKPKLTRKKSFRKLPRFGLLWRSWRFRVRFRLRRLRIMICG
        PIPLWGSDSDVEICDAWASIKIGLS DS S  TNCTSNG F+ R  G +NST+RV+K KLTRKKSFRKLP FGLLWRS RFRVR R RRLRIMICG
Subjt:  PIPLWGSDSDVEICDAWASIKIGLSRDSGSHRTNCTSNGSFIGRKIGSQNSTIRVSKPKLTRKKSFRKLPRFGLLWRSWRFRVRFRLRRLRIMICG

A0A6J1IM99 uncharacterized protein LOC111478319 isoform X11.4e-6580.98Show/hide
Query:  MSGAEITEEEEEEVPRFIDPEDQKERIRQILKYQKSVYSFSSSSSSSSTSSSSAKSLRSSSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPMIKPI
        MS +EIT EEEEEV +FIDPE Q+ERIRQILKYQKSVY  SSSSSSSS+ S+SA S RS SLLDLMKAGN SLRRLFDMQHTSLATYFDKYSGSP IKPI
Subjt:  MSGAEITEEEEEEVPRFIDPEDQKERIRQILKYQKSVYSFSSSSSSSSTSSSSAKSLRSSSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPMIKPI

Query:  PLWGSDSDVEICDAWASIKIGLSRDSGSHRTNCTSNGSFIGRKIGSQNSTIRVSKPKLTRKKSFRKLPRFGLLWRSWRFRVRFR
        PLWGSDSDVEICDAWASIKIG S DS S  TNCTSNG F+ R  G +NST+RV+K KLTRKKSFRKLP FGLLWRS RFRVR R
Subjt:  PLWGSDSDVEICDAWASIKIGLSRDSGSHRTNCTSNGSFIGRKIGSQNSTIRVSKPKLTRKKSFRKLPRFGLLWRSWRFRVRFR

A0A6J1ISL5 uncharacterized protein LOC111478319 isoform X21.2e-6980.93Show/hide
Query:  MSGAEITEEEEEEVPRFIDPEDQKERIRQILKYQKSVYSFSSSSSSSSTSSSSAKSLRSSSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPMIKPI
        MS +EIT EEEEEV +FIDPE Q+ERIRQILKYQKSVY  SSSSSSSS+ S+SA S RS SLLDLMKAGN SLRRLFDMQHTSLATYFDKYSGSP IKPI
Subjt:  MSGAEITEEEEEEVPRFIDPEDQKERIRQILKYQKSVYSFSSSSSSSSTSSSSAKSLRSSSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPMIKPI

Query:  PLWGSDSDVEICDAWASIKIGLSRDSGSHRTNCTSNGSFIGRKIGSQNSTIRVSKPKLTRKKSFRKLPRFGLLWRSWRFRVRFRLRRLRIMICG
        PLWGSDSDVEICDAWASIKIG S DS S  TNCTSNG F+ R  G +NST+RV+K KLTRKKSFRKLP FGLLWRS RFRVR R R LRIMICG
Subjt:  PLWGSDSDVEICDAWASIKIGLSRDSGSHRTNCTSNGSFIGRKIGSQNSTIRVSKPKLTRKKSFRKLPRFGLLWRSWRFRVRFRLRRLRIMICG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGAGCAGAGATAACTGAAGAGGAAGAAGAAGAGGTACCTAGGTTTATTGACCCTGAAGATCAAAAGGAAAGAATCCGACAAATACTCAAGTACCAGAAATCTGT
GTATTCTTTTTCCTCTTCCTCGTCTTCCTCTTCCACTTCCTCGTCCTCTGCAAAATCTTTAAGAAGCAGTAGTTTACTAGACTTGATGAAAGCAGGAAACACTTCTCTCA
GGAGACTATTTGACATGCAGCATACTAGTTTGGCAACCTATTTCGATAAGTACAGTGGATCACCTATGATAAAGCCTATACCTTTGTGGGGCAGTGATTCTGATGTTGAA
ATCTGTGATGCTTGGGCATCCATCAAGATCGGACTCTCACGTGATTCTGGGTCTCACAGAACTAACTGCACATCAAATGGTAGCTTCATTGGCAGAAAGATAGGGTCCCA
GAATAGCACAATTAGGGTTAGTAAGCCAAAGTTAACTAGGAAAAAGTCATTTCGGAAGCTCCCAAGATTTGGTCTATTATGGAGAAGCTGGAGATTTAGAGTTAGGTTCA
GGTTGAGACGACTTAGAATTATGATTTGTGGTAAAATATTC
mRNA sequenceShow/hide mRNA sequence
ATGTCAGGAGCAGAGATAACTGAAGAGGAAGAAGAAGAGGTACCTAGGTTTATTGACCCTGAAGATCAAAAGGAAAGAATCCGACAAATACTCAAGTACCAGAAATCTGT
GTATTCTTTTTCCTCTTCCTCGTCTTCCTCTTCCACTTCCTCGTCCTCTGCAAAATCTTTAAGAAGCAGTAGTTTACTAGACTTGATGAAAGCAGGAAACACTTCTCTCA
GGAGACTATTTGACATGCAGCATACTAGTTTGGCAACCTATTTCGATAAGTACAGTGGATCACCTATGATAAAGCCTATACCTTTGTGGGGCAGTGATTCTGATGTTGAA
ATCTGTGATGCTTGGGCATCCATCAAGATCGGACTCTCACGTGATTCTGGGTCTCACAGAACTAACTGCACATCAAATGGTAGCTTCATTGGCAGAAAGATAGGGTCCCA
GAATAGCACAATTAGGGTTAGTAAGCCAAAGTTAACTAGGAAAAAGTCATTTCGGAAGCTCCCAAGATTTGGTCTATTATGGAGAAGCTGGAGATTTAGAGTTAGGTTCA
GGTTGAGACGACTTAGAATTATGATTTGTGGTAAAATATTC
Protein sequenceShow/hide protein sequence
MSGAEITEEEEEEVPRFIDPEDQKERIRQILKYQKSVYSFSSSSSSSSTSSSSAKSLRSSSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPMIKPIPLWGSDSDVE
ICDAWASIKIGLSRDSGSHRTNCTSNGSFIGRKIGSQNSTIRVSKPKLTRKKSFRKLPRFGLLWRSWRFRVRFRLRRLRIMICGKIF