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MS013945 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013945
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionjosephin-like protein
Genome locationscaffold607:1127227..1127601
RNA-Seq ExpressionMS013945
SyntenyMS013945
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595400.1 hypothetical protein SDJN03_11953, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2165.35Show/hide
Query:  MSK-SSSRRVSFSS--GSDQLPAVPRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKRS-CSKKNSCANNSNSNFNRSHSVSD
        MSK  SSR VS  S  G+ +  A+ RN+KR VITV W FR+     + RFSPESFLRR+ A VAKVLR VS KKRS CSKK S A    +NFNRSHSVSD
Subjt:  MSK-SSSRRVSFSS--GSDQLPAVPRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKRS-CSKKNSCANNSNSNFNRSHSVSD

Query:  HSMEDSHRAEAVKDCINFFNSSSSSSS
         SME+SHRAEAV+DCI+FFNSSSSSS+
Subjt:  HSMEDSHRAEAVKDCINFFNSSSSSSS

KAG6603596.1 hypothetical protein SDJN03_04205, partial [Cucurbita argyrosperma subsp. sororia]4.6e-2159.85Show/hide
Query:  SSSRRVSFSS-------GSDQLPAVPRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKR-----SCSKKNSCAN-NSNSNFNR
        SSSRRVSFSS        + +  A PRN+KR +ITVFW FR+     + R  P SFLRR+ A V KVLRYVS +KR     SCS  +S ++  S SNFNR
Subjt:  SSSRRVSFSS-------GSDQLPAVPRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKR-----SCSKKNSCAN-NSNSNFNR

Query:  SHSVSDHSMEDSHRAEAVKDCINFFNSSSSSS
        SHSVS+ SME+SHRAEAVKDCINFFNSSSSS+
Subjt:  SHSVSDHSMEDSHRAEAVKDCINFFNSSSSSS

KGN54361.1 hypothetical protein Csa_017994 [Cucumis sativus]4.9e-2363.41Show/hide
Query:  SSSRRVSFSSGSDQLPAVPRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKRSCSKKNSCA---NNSNSNFNRSHSVSDHSME
        SS RRVSFS  SDQ  A     ++  I VFW FR+     +ARFSPE FLRRL A +AKVLRYVS +KRS S  NS +   NN +S FNRSHSVSD SME
Subjt:  SSSRRVSFSSGSDQLPAVPRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKRSCSKKNSCA---NNSNSNFNRSHSVSDHSME

Query:  DSHRAEAVKDCINFFNSSSSSSS
        +SHRAEAVKDCI FFNSS+SSS+
Subjt:  DSHRAEAVKDCINFFNSSSSSSS

XP_022950374.1 josephin-like protein [Cucurbita moschata]1.9e-2261.42Show/hide
Query:  SSSRRVSFSS--------GSDQLPAVPRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKRSCSKKNSCANNSNSNFNRSHSVS
        SSSRRVSFSS         + +  A PRN+KR +ITVFW FR+     + R  P SFLRR+ A V KVLRYVS +KRS S  +S +  S SNFNRSHSVS
Subjt:  SSSRRVSFSS--------GSDQLPAVPRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKRSCSKKNSCANNSNSNFNRSHSVS

Query:  DHSMEDSHRAEAVKDCINFFNSSSSSS
        + SME+SHRAEAVKDCINFFNSSSSS+
Subjt:  DHSMEDSHRAEAVKDCINFFNSSSSSS

XP_023518083.1 uncharacterized protein LOC111781626 [Cucurbita pepo subsp. pepo]9.3e-2265.08Show/hide
Query:  MSK-SSSRRVSFSS--GSDQLPAVPRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKRS-CSKKNSCANNSNSNFNRSHSVSD
        MSK  SSR VS  S  G+ +   + RN+KR VITV W FR+     + RFSPESFLRR+ A VAKV+RYVS KKRS CSKK S A    +NFNRSHSVSD
Subjt:  MSK-SSSRRVSFSS--GSDQLPAVPRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKRS-CSKKNSCANNSNSNFNRSHSVSD

Query:  HSMEDSHRAEAVKDCINFFNSSSSSS
         SME+SHRAEAVKDCI+FFNSSSSS+
Subjt:  HSMEDSHRAEAVKDCINFFNSSSSSS

TrEMBL top hitse value%identityAlignment
A0A061EQH2 Uncharacterized protein6.8e-1041.67Show/hide
Query:  MSKSSSRRVSFSSGSDQLPAV----------PRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKRSCSKKNSCANNSNSNFNR
        MS+ +S+RVSFS   ++ P +           R  +R V+   + FR++    ++RFSP   LRRL A VA+ LR+VS ++ S S K    ++S+SN  R
Subjt:  MSKSSSRRVSFSSGSDQLPAV----------PRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKRSCSKKNSCANNSNSNFNR

Query:  SHSVSDHSMEDSHRAEAVKDCINFFNSSSSSS
        S S+++    DSHRAEA++DCI F NSSSS S
Subjt:  SHSVSDHSMEDSHRAEAVKDCINFFNSSSSSS

A0A0A0L2K7 Uncharacterized protein2.4e-2363.41Show/hide
Query:  SSSRRVSFSSGSDQLPAVPRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKRSCSKKNSCA---NNSNSNFNRSHSVSDHSME
        SS RRVSFS  SDQ  A     ++  I VFW FR+     +ARFSPE FLRRL A +AKVLRYVS +KRS S  NS +   NN +S FNRSHSVSD SME
Subjt:  SSSRRVSFSSGSDQLPAVPRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKRSCSKKNSCA---NNSNSNFNRSHSVSDHSME

Query:  DSHRAEAVKDCINFFNSSSSSSS
        +SHRAEAVKDCI FFNSS+SSS+
Subjt:  DSHRAEAVKDCINFFNSSSSSSS

A0A6J1AQZ4 josephin-like protein5.2e-1042.42Show/hide
Query:  MSKSSSRRVSFSSGSDQLPAV----------PRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKRSCSKKNSCANNSNSNFNR
        MS+ +S+RVSFS   ++ P +           R K+R V+   + FR++    ++RFSP   LRRL A VA+ LR+VS  + S S K    ++S+SN  R
Subjt:  MSKSSSRRVSFSSGSDQLPAV----------PRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKRSCSKKNSCANNSNSNFNR

Query:  SHSVSDHSMEDSHRAEAVKDCINFFNSSSSSS
        S S+++    DSHRAEA++DCI F NSSSS S
Subjt:  SHSVSDHSMEDSHRAEAVKDCINFFNSSSSSS

A0A6J1GFL9 josephin-like protein9.1e-2361.42Show/hide
Query:  SSSRRVSFSS--------GSDQLPAVPRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKRSCSKKNSCANNSNSNFNRSHSVS
        SSSRRVSFSS         + +  A PRN+KR +ITVFW FR+     + R  P SFLRR+ A V KVLRYVS +KRS S  +S +  S SNFNRSHSVS
Subjt:  SSSRRVSFSS--------GSDQLPAVPRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKRSCSKKNSCANNSNSNFNRSHSVS

Query:  DHSMEDSHRAEAVKDCINFFNSSSSSS
        + SME+SHRAEAVKDCINFFNSSSSS+
Subjt:  DHSMEDSHRAEAVKDCINFFNSSSSSS

A0A6J1IJN3 uncharacterized protein LOC1114777035.0e-2160.16Show/hide
Query:  SSSRRVSFSS------GSDQLPAVPRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKRSCSKKNSCANNSN----SNFNRSHS
        SSSRRVSFSS       + +  A PRN+KR +ITVFW F++     + R  P SFLRR+ A V KVLRYVS +KRS S   SC+++S+    SNFNRSHS
Subjt:  SSSRRVSFSS------GSDQLPAVPRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKRSCSKKNSCANNSN----SNFNRSHS

Query:  VSDHSMEDSHRAEAVKDCINFFNSSSSS
        VS+ SME+SHRAEAVKDCINFFNSSSS+
Subjt:  VSDHSMEDSHRAEAVKDCINFFNSSSSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09032.1 unknown protein9.3e-0428.06Show/hide
Query:  MSKSSSRRVSFSSG-----------SDQLPAVPRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKRSCSKK----------NS
        MS+ + +RVSF+              D L +   +++R V+    +F +  + +A +      ++R+ A  AK LR++SF++ +  ++          +S
Subjt:  MSKSSSRRVSFSSG-----------SDQLPAVPRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKRSCSKK----------NS

Query:  CANNSNSNFNRSHSVSDHSMEDSHRAEAVKDCINFFNSS
         +++S     RS SV++    +SHRAEA++DCI F NSS
Subjt:  CANNSNSNFNRSHSVSDHSMEDSHRAEAVKDCINFFNSS

AT5G01225.1 unknown protein4.2e-0433.33Show/hide
Query:  MSKSSSRRVSFS---SGSDQL----PAVPRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKRSCSKKNSCANNSNSNFNRSHS
        MS+ +S+RV FS     +D+L     +  R+ +R V+   ++F    + S +  + +  LR +   V K  RY+SF + +     S ++N +S+     S
Subjt:  MSKSSSRRVSFS---SGSDQL----PAVPRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKRSCSKKNSCANNSNSNFNRSHS

Query:  VSDHSMEDSHRAEAVKDCINFFNSSSSSS
         S +  E SHRAEA++DCI F NS SS S
Subjt:  VSDHSMEDSHRAEAVKDCINFFNSSSSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAGAAATGTCAAAAAGCAGCAGCCGGCGAGTGAGTTTCAGTTCAGGTTCCGATCAGCTGCCAGCTGTCCCAAGAAACAAGAAGAGATCTGTTATCACCGTGTTCTGGGC
CTTCCGCGTGATTCCGGCCAAATCCGCCGCCAGATTCTCGCCGGAAAGTTTCCTCCGCCGCCTCCGCGCCAACGTGGCCAAAGTTCTCCGATACGTCTCGTTCAAGAAGA
GATCTTGTTCGAAGAAAAACTCGTGTGCAAATAATTCAAATTCGAATTTCAACAGATCCCATTCGGTTTCAGATCACTCCATGGAGGATTCTCACCGTGCTGAAGCCGTT
AAAGATTGCATCAACTTCTTCAATTCTTCTTCTTCTTCTTCTTCT
mRNA sequenceShow/hide mRNA sequence
GAAGAAATGTCAAAAAGCAGCAGCCGGCGAGTGAGTTTCAGTTCAGGTTCCGATCAGCTGCCAGCTGTCCCAAGAAACAAGAAGAGATCTGTTATCACCGTGTTCTGGGC
CTTCCGCGTGATTCCGGCCAAATCCGCCGCCAGATTCTCGCCGGAAAGTTTCCTCCGCCGCCTCCGCGCCAACGTGGCCAAAGTTCTCCGATACGTCTCGTTCAAGAAGA
GATCTTGTTCGAAGAAAAACTCGTGTGCAAATAATTCAAATTCGAATTTCAACAGATCCCATTCGGTTTCAGATCACTCCATGGAGGATTCTCACCGTGCTGAAGCCGTT
AAAGATTGCATCAACTTCTTCAATTCTTCTTCTTCTTCTTCTTCT
Protein sequenceShow/hide protein sequence
EEMSKSSSRRVSFSSGSDQLPAVPRNKKRSVITVFWAFRVIPAKSAARFSPESFLRRLRANVAKVLRYVSFKKRSCSKKNSCANNSNSNFNRSHSVSDHSMEDSHRAEAV
KDCINFFNSSSSSSS