; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013960 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013960
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription termination/antitermination protein NusG
Genome locationscaffold607:1256406..1258349
RNA-Seq ExpressionMS013960
SyntenyMS013960
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR006645 - NusG, N-terminal
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR036735 - NusG, N-terminal domain superfamily
IPR043425 - NusG-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147896.1 uncharacterized protein LOC101211195 [Cucumis sativus]7.0e-15488.92Show/hide
Query:  MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALET--AAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDY
        MA GLL WSS+SL S+SFPALSFSLSSS+ TQLS+SA++ET  AAADD QQLS RERR+LRNERREIKTTTNWREEVEERLC+KPKKEFA+WTEKLNLDY
Subjt:  MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALET--AAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDY

Query:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTK
        LAKLGPQWWVMRVARVR QEIVERLAR LARNYPDLDFKIYYPSV+EKR+LKNGTY V P+AVFPGSVFIRC+MNKEIHDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGK
        RQINKPKPVSEADMEAIFKEAK+EQERHDQ FLEKEQE+APN++  KTDLDTNGTTATK KGR KKAVN LSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Subjt:  RQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGK

Query:  VTVGFTLFGKETLVDLDIGDIVVET
        VTVGFTLFGKETLVDLDIGDI+VET
Subjt:  VTVGFTLFGKETLVDLDIGDIVVET

XP_008448915.1 PREDICTED: transcription termination/antitermination protein NusG [Cucumis melo]2.0e-15690.77Show/hide
Query:  MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALET--AAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDY
        MA+GLL WS ISL S+S PALSFSLSSS+ TQLSISA++ET  AAADDVQQLSAR+RR+LRNERREIKTTTNWREEVEERLC+KPKKEFA+WTEKLNLDY
Subjt:  MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALET--AAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDY

Query:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTK
        LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSV+EKR+LKNGTY VKP+AVFPGSVFIRC+MNKEIHDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGK
        RQINKPKPVSEADMEAIFKEAKEEQERHDQ FLEKEQE+APNS+  KTDLDTNGTTATK KGR KKAVN LSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Subjt:  RQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGK

Query:  VTVGFTLFGKETLVDLDIGDIVVET
        VTVGFTLFGKETLVDLDIGDI+VET
Subjt:  VTVGFTLFGKETLVDLDIGDIVVET

XP_022151589.1 uncharacterized protein LOC111019492 [Momordica charantia]1.6e-174100Show/hide
Query:  MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLA
        MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLA
Subjt:  MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLA

Query:  KLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQ
        KLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQ
Subjt:  KLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQ

Query:  INKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVT
        INKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVT
Subjt:  INKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVT

Query:  VGFTLFGKETLVDLDIGDIVVETT
        VGFTLFGKETLVDLDIGDIVVETT
Subjt:  VGFTLFGKETLVDLDIGDIVVETT

XP_023518856.1 uncharacterized protein LOC111782252 [Cucurbita pepo subsp. pepo]6.8e-14987.93Show/hide
Query:  MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLA
        MA GLL W+++ LRS SFP+LSFSLSSS  TQLSISAALET AADDV QLSARERRRLRNERRE K TTNWREEVEERLCKKPKKEFA+WTEKLNLDYLA
Subjt:  MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLA

Query:  KLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQ
        KLGPQWWVMRV+RVRGQEIVERLARSLARNYPDLDFKIYYPSV EKR+LKNG+Y VKP+AVFPGSVFIRCIMNKE+HDFIRECDGVGGFVGAKVGNTKRQ
Subjt:  KLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQ

Query:  INKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVT
        INKPKPVS+ DMEAIFKEAKE+QERHDQ FLEKE+E+APN ++ +TDLDTNGTTATK KGR KKAVN LSPGSTVRVASGTFAEFEGSLKK+NRKSGKVT
Subjt:  INKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVT

Query:  VGFTLFGKETLVDLDIGDIVVET
        VGFTLFGKETLV+LDIGDI VET
Subjt:  VGFTLFGKETLVDLDIGDIVVET

XP_038880828.1 transcription termination/antitermination protein NusG isoform X1 [Benincasa hispida]1.5e-15691.05Show/hide
Query:  MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALET-AAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYL
        MA GLL WS ISLRS SFPALSFSLSS K TQLSISA +ET +AADD+QQLSARERR+LRNERREIKTTTNWREEVEERLCKKPKKEFA+WTEKLNLDYL
Subjt:  MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALET-AAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYL

Query:  AKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKR
        +KLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKR+LKNGTY VKP+A+FPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKR
Subjt:  AKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKR

Query:  QINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKV
        QINKPKPVSEADMEAIFKEAKEEQERHDQ FLEKEQ++APNS+  +TDLDTNGTTATK KGR KKAVN LSPGSTVRVASGTFAEFEGSLKKLNRKSGKV
Subjt:  QINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKV

Query:  TVGFTLFGKETLVDLDIGDIVVET
        TVGFTLFGKETLVDLDIGDI+VET
Subjt:  TVGFTLFGKETLVDLDIGDIVVET

TrEMBL top hitse value%identityAlignment
A0A0A0KZV1 NGN domain-containing protein3.4e-15488.92Show/hide
Query:  MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALET--AAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDY
        MA GLL WSS+SL S+SFPALSFSLSSS+ TQLS+SA++ET  AAADD QQLS RERR+LRNERREIKTTTNWREEVEERLC+KPKKEFA+WTEKLNLDY
Subjt:  MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALET--AAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDY

Query:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTK
        LAKLGPQWWVMRVARVR QEIVERLAR LARNYPDLDFKIYYPSV+EKR+LKNGTY V P+AVFPGSVFIRC+MNKEIHDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGK
        RQINKPKPVSEADMEAIFKEAK+EQERHDQ FLEKEQE+APN++  KTDLDTNGTTATK KGR KKAVN LSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Subjt:  RQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGK

Query:  VTVGFTLFGKETLVDLDIGDIVVET
        VTVGFTLFGKETLVDLDIGDI+VET
Subjt:  VTVGFTLFGKETLVDLDIGDIVVET

A0A1S3BKU2 transcription termination/antitermination protein NusG9.5e-15790.77Show/hide
Query:  MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALET--AAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDY
        MA+GLL WS ISL S+S PALSFSLSSS+ TQLSISA++ET  AAADDVQQLSAR+RR+LRNERREIKTTTNWREEVEERLC+KPKKEFA+WTEKLNLDY
Subjt:  MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALET--AAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDY

Query:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTK
        LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSV+EKR+LKNGTY VKP+AVFPGSVFIRC+MNKEIHDFIRECDGVGGFVGAKVGNTK
Subjt:  LAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTK

Query:  RQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGK
        RQINKPKPVSEADMEAIFKEAKEEQERHDQ FLEKEQE+APNS+  KTDLDTNGTTATK KGR KKAVN LSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Subjt:  RQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGK

Query:  VTVGFTLFGKETLVDLDIGDIVVET
        VTVGFTLFGKETLVDLDIGDI+VET
Subjt:  VTVGFTLFGKETLVDLDIGDIVVET

A0A6J1DDH4 uncharacterized protein LOC1110194927.8e-175100Show/hide
Query:  MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLA
        MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLA
Subjt:  MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLA

Query:  KLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQ
        KLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQ
Subjt:  KLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQ

Query:  INKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVT
        INKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVT
Subjt:  INKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVT

Query:  VGFTLFGKETLVDLDIGDIVVETT
        VGFTLFGKETLVDLDIGDIVVETT
Subjt:  VGFTLFGKETLVDLDIGDIVVETT

A0A6J1EV13 uncharacterized protein LOC1114382237.3e-14987.62Show/hide
Query:  MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLA
        MA GLL W+++ LRS SFP+LSFSLSSS  TQLSISAALET AADDV QLSARERRRLRNERRE K TTNWREEVEERLCKKPKKEFA+WTEKLNLDYLA
Subjt:  MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLA

Query:  KLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQ
        KLGPQWWVMRV+RVRGQEIVERLARSLARNYPDLDFKIYYPSV EKR+LKNG+Y VKP+AVFPGSVFIRCIMNKE+HDFIRECDGVGGFVGAKVGNTKRQ
Subjt:  KLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQ

Query:  INKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVT
        INKPKPVS+ DMEAIFKEAKEEQERHDQ FLEKE+E+APN ++ +TDLDTNGTTATK KGR KKAVN LSPGSTVRV+SGTFAEFEGSLKK+NRKS KVT
Subjt:  INKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVT

Query:  VGFTLFGKETLVDLDIGDIVVET
        VGFTLFGKETLV+LDIGDI+VET
Subjt:  VGFTLFGKETLVDLDIGDIVVET

A0A6J1HQX6 uncharacterized protein LOC1114658891.1e-14787.31Show/hide
Query:  MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLA
        MA  LL W+++SLRS SFP+LSFSLSSS  TQLSISAALET AADDV QLSARERRRLRNERRE K TTNWREEVEERLCKKPKKEFA+WTEKLNLDYL+
Subjt:  MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLA

Query:  KLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQ
        KLGPQWWVMRV+RVRGQEIVERLARSLARNYPDLDFKIYYPSV EKR+LKNG+Y VKP+AVFPGSVFIRCIMNKE+HDFIRECDGVGGFVGAKVGNTKRQ
Subjt:  KLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQ

Query:  INKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVT
        INKPKPVS+ DMEAIFKEAKEEQERHDQ FLEK++E+APN ++ +T LDTNGTTATK KGR KKAVN LSPGSTVRVASGTFAEFEGSLKK+NRKSGKVT
Subjt:  INKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVT

Query:  VGFTLFGKETLVDLDIGDIVVET
        VGFTLFGKETLV LDIGDI+VET
Subjt:  VGFTLFGKETLVDLDIGDIVVET

SwissProt top hitse value%identityAlignment
P35872 Transcription termination/antitermination protein NusG1.1e-0826.94Show/hide
Query:  DLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMN-----KEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHD
        D  F++  P+ +     + G   V  + +FPG +FI+  +       E  + +R   G+ GFVGA +        +P P+S  ++  I            
Subjt:  DLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMN-----KEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHD

Query:  QDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIV
                            L+ +G    K      KA  A   G  VRV SG FA+F G++ ++N + GKV V  T+FG+ET V+LD   +V
Subjt:  QDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIV

P65591 Transcription termination/antitermination protein NusG1.9e-0821.56Show/hide
Query:  LGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQI
        +  +W+V++      + +   L   +AR      F      V++   ++NG   +  R  +PG V +   M  +    ++    V GF+G +        
Subjt:  LGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQI

Query:  NKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTV
        N+P P+S+ + E I ++ +                                T   KPK +++  V     G  VRV  G FA+F G ++++N +  K+ V
Subjt:  NKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTV

Query:  GFTLFGKETLVDLDIGDI
           +FG+ET V+L+   +
Subjt:  GFTLFGKETLVDLDIGDI

P65592 Transcription termination/antitermination protein NusG1.9e-0821.56Show/hide
Query:  LGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQI
        +  +W+V++      + +   L   +AR      F      V++   ++NG   +  R  +PG V +   M  +    ++    V GF+G +        
Subjt:  LGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQI

Query:  NKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTV
        N+P P+S+ + E I ++ +                                T   KPK +++  V     G  VRV  G FA+F G ++++N +  K+ V
Subjt:  NKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTV

Query:  GFTLFGKETLVDLDIGDI
           +FG+ET V+L+   +
Subjt:  GFTLFGKETLVDLDIGDI

Q06795 Transcription termination/antitermination protein NusG1.7e-0927.27Show/hide
Query:  DLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLE
        D  F++  P  +E+  +KNG   V  + VFPG V +  +M  +    +R   GV GFVG+         +KP P+   + E I K    ++ + D DF  
Subjt:  DLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLE

Query:  KEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDI
        KE                                       TV+V  G FA F GS+++++    KV V   +FG+ET V+L+   I
Subjt:  KEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDI

Q9HWC4 Transcription termination/antitermination protein NusG2.4e-0820.18Show/hide
Query:  LGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQI
        +  +W+V+       + ++  L   +     + +F       +E   ++NG      R  FPG V ++  MN+     +++   V GF+G          
Subjt:  LGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQI

Query:  NKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTV
        +KP P+++ + +AI +   +  ++                               KPK           PG TVRV  G FA+F G ++++N +  ++ V
Subjt:  NKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTV

Query:  GFTLFGKETLVDLDIGDI
           +FG+ T V+L+   +
Subjt:  GFTLFGKETLVDLDIGDI

Arabidopsis top hitse value%identityAlignment
AT3G09210.1 plastid transcriptionally active 139.0e-9155.82Show/hide
Query:  GLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLG
        GLL WS    RSS  P++   ++    TQ SI+A +     +   QL+A+ERR+LRNERRE K   +WREEVEE+L KKPKK +A+WTE+LNLD LA+ G
Subjt:  GLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLG

Query:  PQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQINK
        PQWW +RV+R+RG E  + LAR+LAR +P+++F +Y PSVQ KR+LKNG+  VKP+ VFPG +FIRCI+NKEIHD IR+ DGVGGF+G+KVGNTKRQINK
Subjt:  PQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQINK

Query:  PKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDL------DTNGTTA-TKPKGRLKKAVNA---------LSPGSTVRVASGTFAEFEG
        P+PV ++D+EAIFK+AKE QE+ D +F E ++ +   S +   +L      D   T A +KPK   +KA  A         L+ GSTVRV SGTFAEF G
Subjt:  PKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDL------DTNGTTA-TKPKGRLKKAVNA---------LSPGSTVRVASGTFAEFEG

Query:  SLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIVVE
        +LKKLNRK+ K TVGFTLFGKETLV++DI ++V E
Subjt:  SLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIVVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTTGGGCTTCTGCCGTGGAGTTCAATTTCTCTCCGCTCTTCCTCTTTCCCTGCCCTTTCCTTCTCTCTCTCCTCTTCCAAATGCACCCAATTATCCATCTCCGC
CGCCCTCGAAACCGCCGCCGCCGACGATGTCCAGCAGCTGTCGGCTCGGGAGAGGAGGAGGCTGAGGAATGAGAGAAGAGAGATTAAAACCACTACCAATTGGAGAGAAG
AAGTGGAAGAGAGGCTCTGTAAGAAGCCGAAGAAGGAATTTGCCTCTTGGACTGAGAAGCTCAACCTCGATTACCTCGCTAAATTGGGCCCTCAATGGTGGGTTATGAGG
GTCGCTCGCGTTAGAGGTCAGGAAATTGTCGAACGCCTCGCCCGTTCTCTTGCTAGGAACTACCCCGACCTCGATTTCAAGATATATTACCCATCAGTCCAGGAGAAGAG
GCGACTAAAGAACGGTACTTACATGGTTAAACCAAGAGCTGTTTTTCCTGGATCTGTATTTATAAGGTGTATCATGAACAAGGAGATACATGACTTCATTCGAGAGTGTG
ATGGAGTTGGAGGCTTTGTTGGCGCGAAGGTCGGGAATACGAAACGACAGATAAACAAACCAAAGCCAGTATCTGAAGCTGATATGGAAGCAATCTTCAAAGAGGCAAAG
GAAGAGCAAGAAAGACATGACCAGGATTTTCTTGAGAAAGAGCAAGAGAAAGCTCCAAACTCTACCATACACAAGACCGACTTAGATACAAATGGTACTACTGCTACAAA
GCCCAAAGGAAGATTGAAAAAAGCCGTTAATGCTTTGTCTCCTGGGTCAACTGTTCGGGTGGCATCCGGGACTTTCGCAGAATTTGAAGGTTCTCTTAAGAAGCTGAACC
GTAAAAGTGGAAAGGTAACGGTGGGATTCACACTATTTGGGAAGGAAACCCTTGTAGACCTTGACATTGGTGATATTGTAGTTGAGACAACA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTTTGGGCTTCTGCCGTGGAGTTCAATTTCTCTCCGCTCTTCCTCTTTCCCTGCCCTTTCCTTCTCTCTCTCCTCTTCCAAATGCACCCAATTATCCATCTCCGC
CGCCCTCGAAACCGCCGCCGCCGACGATGTCCAGCAGCTGTCGGCTCGGGAGAGGAGGAGGCTGAGGAATGAGAGAAGAGAGATTAAAACCACTACCAATTGGAGAGAAG
AAGTGGAAGAGAGGCTCTGTAAGAAGCCGAAGAAGGAATTTGCCTCTTGGACTGAGAAGCTCAACCTCGATTACCTCGCTAAATTGGGCCCTCAATGGTGGGTTATGAGG
GTCGCTCGCGTTAGAGGTCAGGAAATTGTCGAACGCCTCGCCCGTTCTCTTGCTAGGAACTACCCCGACCTCGATTTCAAGATATATTACCCATCAGTCCAGGAGAAGAG
GCGACTAAAGAACGGTACTTACATGGTTAAACCAAGAGCTGTTTTTCCTGGATCTGTATTTATAAGGTGTATCATGAACAAGGAGATACATGACTTCATTCGAGAGTGTG
ATGGAGTTGGAGGCTTTGTTGGCGCGAAGGTCGGGAATACGAAACGACAGATAAACAAACCAAAGCCAGTATCTGAAGCTGATATGGAAGCAATCTTCAAAGAGGCAAAG
GAAGAGCAAGAAAGACATGACCAGGATTTTCTTGAGAAAGAGCAAGAGAAAGCTCCAAACTCTACCATACACAAGACCGACTTAGATACAAATGGTACTACTGCTACAAA
GCCCAAAGGAAGATTGAAAAAAGCCGTTAATGCTTTGTCTCCTGGGTCAACTGTTCGGGTGGCATCCGGGACTTTCGCAGAATTTGAAGGTTCTCTTAAGAAGCTGAACC
GTAAAAGTGGAAAGGTAACGGTGGGATTCACACTATTTGGGAAGGAAACCCTTGTAGACCTTGACATTGGTGATATTGTAGTTGAGACAACA
Protein sequenceShow/hide protein sequence
MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLGPQWWVMR
VARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAK
EEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIVVETT