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MS013982 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013982
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEncodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).
Genome locationscaffold607:1399324..1401016
RNA-Seq ExpressionMS013982
SyntenyMS013982
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448572.1 PREDICTED: uncharacterized protein LOC103490707 isoform X1 [Cucumis melo]1.5e-5881.17Show/hide
Query:  MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQ
        MEGKK +G   SSSSLT DLFGS ETSYSSTTGIFGSIFAPSSKVLG ESLLSQ KE ER+SVNEPW PN EA+D  ANH QKESQEMKNKD+SS YQ+Q
Subjt:  MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQ

Query:  RAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG
         AQPCHLSSSIYYGGQDVY+  QNS+NSG NS +KK+GGEDDSGSASRGNWWQG
Subjt:  RAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG

XP_008448581.1 PREDICTED: uncharacterized protein LOC103490707 isoform X2 [Cucumis melo]1.5e-5881.17Show/hide
Query:  MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQ
        MEGKK +G   SSSSLT DLFGS ETSYSSTTGIFGSIFAPSSKVLG ESLLSQ KE ER+SVNEPW PN EA+D  ANH QKESQEMKNKD+SS YQ+Q
Subjt:  MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQ

Query:  RAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG
         AQPCHLSSSIYYGGQDVY+  QNS+NSG NS +KK+GGEDDSGSASRGNWWQG
Subjt:  RAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG

XP_022151567.1 uncharacterized protein LOC111019480 [Momordica charantia]8.3e-7398.01Show/hide
Query:  MEGKKQLGSSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQRAQ
        MEGKKQLGSSSSLT DLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKD AANHRQKESQEMKNKDLSS YQEQRAQ
Subjt:  MEGKKQLGSSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQRAQ

Query:  PCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG
        PCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG
Subjt:  PCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG

XP_038882075.1 uncharacterized protein LOC120073353 isoform X1 [Benincasa hispida]7.3e-6183.12Show/hide
Query:  MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQ
        MEGKK +G   SSSSLT DLFGSKETSYSSTTGIFGSIFAPSSKVLG +SLLSQ KEGERDSVNEPWIPN EA+D  ANH QKES EMKNKD+SS YQ+Q
Subjt:  MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQ

Query:  RAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG
        RAQPCHLSSSIYYGGQDVY+  QNS+NS VNS +KK+GGEDDSGSASRGNWWQG
Subjt:  RAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG

XP_038882076.1 uncharacterized protein LOC120073353 isoform X2 [Benincasa hispida]9.9e-5881.17Show/hide
Query:  MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQ
        MEGKK +G   SSSSLT DLFGSKETSYSSTTGIFGSIFAPSSKVLG +SLLSQ KEGERDSVNEPWIPN EA+D  ANH QKES EMKNKD+SS YQ+Q
Subjt:  MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQ

Query:  RAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG
        RAQPCHLSSSIYYGGQDVY+  QNS+    NS +KK+GGEDDSGSASRGNWWQG
Subjt:  RAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG

TrEMBL top hitse value%identityAlignment
A0A0A0L143 Uncharacterized protein1.8e-5779.87Show/hide
Query:  MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQ
        MEGKK +G   SSSSLT DLFGS ETSYSSTTGIFGSIFAPSSKVLG ESLLS  KE ER+SVNEPW PN  A+D  ANH QKESQE KNKD+SS YQ+Q
Subjt:  MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQ

Query:  RAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG
        RAQPCHLSSSIYYGGQDVY+  QNS+NSG NS +KK+GGEDDSGSASRGNWWQG
Subjt:  RAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG

A0A1S3BK03 uncharacterized protein LOC103490707 isoform X27.4e-5981.17Show/hide
Query:  MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQ
        MEGKK +G   SSSSLT DLFGS ETSYSSTTGIFGSIFAPSSKVLG ESLLSQ KE ER+SVNEPW PN EA+D  ANH QKESQEMKNKD+SS YQ+Q
Subjt:  MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQ

Query:  RAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG
         AQPCHLSSSIYYGGQDVY+  QNS+NSG NS +KK+GGEDDSGSASRGNWWQG
Subjt:  RAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG

A0A1S3BKM1 uncharacterized protein LOC103490707 isoform X17.4e-5981.17Show/hide
Query:  MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQ
        MEGKK +G   SSSSLT DLFGS ETSYSSTTGIFGSIFAPSSKVLG ESLLSQ KE ER+SVNEPW PN EA+D  ANH QKESQEMKNKD+SS YQ+Q
Subjt:  MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQ

Query:  RAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG
         AQPCHLSSSIYYGGQDVY+  QNS+NSG NS +KK+GGEDDSGSASRGNWWQG
Subjt:  RAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG

A0A5D3DIY4 Uncharacterized protein7.4e-5981.17Show/hide
Query:  MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQ
        MEGKK +G   SSSSLT DLFGS ETSYSSTTGIFGSIFAPSSKVLG ESLLSQ KE ER+SVNEPW PN EA+D  ANH QKESQEMKNKD+SS YQ+Q
Subjt:  MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQ

Query:  RAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG
         AQPCHLSSSIYYGGQDVY+  QNS+NSG NS +KK+GGEDDSGSASRGNWWQG
Subjt:  RAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG

A0A6J1DDV5 uncharacterized protein LOC1110194804.0e-7398.01Show/hide
Query:  MEGKKQLGSSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQRAQ
        MEGKKQLGSSSSLT DLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKD AANHRQKESQEMKNKDLSS YQEQRAQ
Subjt:  MEGKKQLGSSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQRAQ

Query:  PCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG
        PCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG
Subjt:  PCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G39855.2 unknown protein2.9e-1542.14Show/hide
Query:  MEGKKQL----GSSSSLTNDLFGSKET-SY-SSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHR--QKESQEMKNKDLSS
        M+ KK +     SSSS  + +FG + + SY SSTTG+F SIF P S V  G +L S+               N  AK    N     +  +  KNK+  S
Subjt:  MEGKKQL----GSSSSLTNDLFGSKET-SY-SSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHR--QKESQEMKNKDLSS

Query:  FYQEQRAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG
        +  E+   PC+LSSSIYYGGQD YS S  + ++     +KKDG E DS SASRGNWW+G
Subjt:  FYQEQRAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG

AT3G55646.1 unknown protein4.2e-1437.97Show/hide
Query:  EGKKQLGSSSSLTNDL------FGSK--ETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSF
        + KK++ S+SS ++ L      FG +   +S SS TG+F SIF P S     + L  Q+    +    +   PN  AK   +N ++K+          S+
Subjt:  EGKKQLGSSSSLTNDL------FGSK--ETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSF

Query:  YQEQRAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG
        Y E+   PCHLSSS+YYGGQ+ YS    S  +  +  +KKDG E DS  ASRGNWW+G
Subjt:  YQEQRAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG

AT5G02020.1 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).3.9e-2853.8Show/hide
Query:  MEGKKQLG------SSSSLTNDLFGSKET-SYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSF
        MEG+K+        SSSSLT++LFGS+E  S  S++GI GSIF P SKVLG ES+  +   G        W   T +K      R +E QE      S +
Subjt:  MEGKKQLG------SSSSLTNDLFGSKET-SYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSF

Query:  YQEQRAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG
         Q+QR QPCHLSSSIYYGG DVY Q QNS +   NS  KKDGGEDDSGSASRGNWWQG
Subjt:  YQEQRAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG

AT5G02020.2 Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).6.9e-1748.84Show/hide
Query:  MEGKKQLG------SSSSLTNDLFGSKET-SYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSF
        MEG+K+        SSSSLT++LFGS+E  S  S++GI GSIF P SKVLG ES+  +   G        W   T +K      R +E QE      S +
Subjt:  MEGKKQLG------SSSSLTNDLFGSKET-SYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSF

Query:  YQEQRAQPCHLSSSIYYGGQDVYSQSQNS
         Q+QR QPCHLSSSIYYGG DVY Q QNS
Subjt:  YQEQRAQPCHLSSSIYYGGQDVYSQSQNS

AT5G59080.1 unknown protein1.3e-1237.89Show/hide
Query:  MEGKKQLGS----SSSLTNDLFGSKETS-YSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQ
        MEGK ++GS    SSS T +LFGSK+ S  SS++GIF ++F   S            K   RD  N                 +  SQ  + + L++  Q
Subjt:  MEGKKQLGS----SSSLTNDLFGSKETS-YSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQ

Query:  EQRAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSG-----SASRGNWWQG
        E R +PCHLSSS+YYGGQDVY++S  +         ++  GEDD+        SRGNWWQG
Subjt:  EQRAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSG-----SASRGNWWQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGAAAAAAGCAACTGGGTTCCTCTTCTTCTCTCACCAATGACCTGTTTGGCTCCAAAGAAACTTCCTACTCCTCAACCACTGGAATTTTCGGCTCTATATTTGC
ACCTTCTTCCAAGGTGTTAGGGGGAGAGTCTCTGCTCTCTCAGATCAAAGAGGGAGAGAGGGATTCTGTAAATGAGCCATGGATCCCCAACACTGAAGCTAAAGATGCTG
CTGCTAATCATAGACAAAAGGAGAGTCAGGAGATGAAGAATAAAGATCTGAGTTCCTTTTATCAGGAACAAAGAGCACAACCATGTCATCTTAGCTCATCAATCTATTAT
GGTGGCCAAGATGTTTATTCTCAGTCTCAGAATTCCCATAATTCCGGGGTGAACTCGGTGTTCAAGAAGGATGGGGGAGAAGATGATTCTGGGAGTGCTTCAAGAGGAAA
TTGGTGGCAAGGTATAAAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGAAAAAAGCAACTGGGTTCCTCTTCTTCTCTCACCAATGACCTGTTTGGCTCCAAAGAAACTTCCTACTCCTCAACCACTGGAATTTTCGGCTCTATATTTGC
ACCTTCTTCCAAGGTGTTAGGGGGAGAGTCTCTGCTCTCTCAGATCAAAGAGGGAGAGAGGGATTCTGTAAATGAGCCATGGATCCCCAACACTGAAGCTAAAGATGCTG
CTGCTAATCATAGACAAAAGGAGAGTCAGGAGATGAAGAATAAAGATCTGAGTTCCTTTTATCAGGAACAAAGAGCACAACCATGTCATCTTAGCTCATCAATCTATTAT
GGTGGCCAAGATGTTTATTCTCAGTCTCAGAATTCCCATAATTCCGGGGTGAACTCGGTGTTCAAGAAGGATGGGGGAGAAGATGATTCTGGGAGTGCTTCAAGAGGAAA
TTGGTGGCAAGGTATAAAA
Protein sequenceShow/hide protein sequence
MEGKKQLGSSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQRAQPCHLSSSIYY
GGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQGIK