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MS013983 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013983
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationscaffold607:1415777..1415965
RNA-Seq ExpressionMS013983
SyntenyMS013983
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACJ86172.1 unknown [Medicago truncatula]4.3e-0760Show/hide
Query:  AKILSSLGIECKCCDGIGGKCSTEFTSSCSNLHCSPWKQY
        +KI  +LG+ CKCCDGIGG C++ +T SC NL CSPWK +
Subjt:  AKILSSLGIECKCCDGIGGKCSTEFTSSCSNLHCSPWKQY
KAG6595355.1 hypothetical protein SDJN03_11908, partial [Cucurbita argyrosperma subsp. sororia]1.6e-0964Show/hide
Query:  KGNFEGLNAKILSSLGIECKCCDG-IGGKCSTEF-TSSCSNLHCSPWKQY
        KG FE  ++ ++++LGIECKCCD  IGGKCST F  +SCSNL CSPWK Y
Subjt:  KGNFEGLNAKILSSLGIECKCCDG-IGGKCSTEF-TSSCSNLHCSPWKQY
RDY12825.1 hypothetical protein CR513_02326, partial [Mucuna pruriens]4.3e-0757.5Show/hide
Query:  AKILSSLGIECKCCDGIGGKCSTEFTSSCSNLHCSPWKQY
        +KI +SLG+ CKCCDG+GG C++ +T SC+NL C PWK +
Subjt:  AKILSSLGIECKCCDGIGGKCSTEFTSSCSNLHCSPWKQY
XP_003516905.1 uncharacterized protein LOC100806570 [Glycine max]3.3e-0757.5Show/hide
Query:  AKILSSLGIECKCCDGIGGKCSTEFTSSCSNLHCSPWKQY
        +K  ++LG+ CKCCDG+GG C++ +T SCSNL CSPWK +
Subjt:  AKILSSLGIECKCCDGIGGKCSTEFTSSCSNLHCSPWKQY
XP_027337837.1 uncharacterized protein LOC113851528 [Abrus precatorius]4.3e-0760Show/hide
Query:  AKILSSLGIECKCCDGIGGKCSTEFTSSCSNLHCSPWKQY
        +KI ++LGI CKCCDG+GG C++ +T SCSNL C PWK +
Subjt:  AKILSSLGIECKCCDGIGGKCSTEFTSSCSNLHCSPWKQY
TrEMBL top hitse value%identityAlignment
A0A0A0KXD1 Uncharacterized protein1.5e-1365.08Show/hide
Query:  SINLILHLIMGFFFMKGNFEGLNAKILSSLGIECKCCDGIGGKCSTEFTSSCSNLHCSPWKQY
        SI+ IL L  GF   KG ++   ++I +++GIECKCCD IGGKCSTEFT+SCSNLHCSPWKQY
Subjt:  SINLILHLIMGFFFMKGNFEGLNAKILSSLGIECKCCDGIGGKCSTEFTSSCSNLHCSPWKQY
A0A0B2SG43 Uncharacterized protein1.6e-0757.5Show/hide
Query:  AKILSSLGIECKCCDGIGGKCSTEFTSSCSNLHCSPWKQY
        +K  ++LG+ CKCCDG+GG C++ +T SCSNL CSPWK +
Subjt:  AKILSSLGIECKCCDGIGGKCSTEFTSSCSNLHCSPWKQY
A0A371ICU6 Uncharacterized protein (Fragment)2.1e-0757.5Show/hide
Query:  AKILSSLGIECKCCDGIGGKCSTEFTSSCSNLHCSPWKQY
        +KI +SLG+ CKCCDG+GG C++ +T SC+NL C PWK +
Subjt:  AKILSSLGIECKCCDGIGGKCSTEFTSSCSNLHCSPWKQY
B7FN39 Uncharacterized protein2.1e-0760Show/hide
Query:  AKILSSLGIECKCCDGIGGKCSTEFTSSCSNLHCSPWKQY
        +KI  +LG+ CKCCDGIGG C++ +T SC NL CSPWK +
Subjt:  AKILSSLGIECKCCDGIGGKCSTEFTSSCSNLHCSPWKQY
I1J716 Uncharacterized protein1.6e-0757.5Show/hide
Query:  AKILSSLGIECKCCDGIGGKCSTEFTSSCSNLHCSPWKQY
        +K  ++LG+ CKCCDG+GG C++ +T SCSNL CSPWK +
Subjt:  AKILSSLGIECKCCDGIGGKCSTEFTSSCSNLHCSPWKQY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTATAAATCTTATTCTTCATTTGATTATGGGGTTTTTCTTTATGAAAGGTAATTTTGAGGGATTGAACGCAAAGATTTTGAGTAGCTTGGGAATTGAATGCAAGTGTTG
TGATGGGATTGGAGGTAAATGCTCTACTGAGTTCACTTCTTCTTGCTCTAATCTCCATTGTTCTCCTTGGAAACAATAT
mRNA sequenceShow/hide mRNA sequence
TCTATAAATCTTATTCTTCATTTGATTATGGGGTTTTTCTTTATGAAAGGTAATTTTGAGGGATTGAACGCAAAGATTTTGAGTAGCTTGGGAATTGAATGCAAGTGTTG
TGATGGGATTGGAGGTAAATGCTCTACTGAGTTCACTTCTTCTTGCTCTAATCTCCATTGTTCTCCTTGGAAACAATAT
Protein sequenceShow/hide protein sequence
SINLILHLIMGFFFMKGNFEGLNAKILSSLGIECKCCDGIGGKCSTEFTSSCSNLHCSPWKQY