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MS013985 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013985
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionBeta-galactosidase
Genome locationscaffold607:1427975..1428331
RNA-Seq ExpressionMS013985
SyntenyMS013985
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0005773 - vacuole (cellular component)
GO:0004565 - beta-galactosidase activity (molecular function)
InterPro domainsIPR001944 - Glycoside hydrolase, family 35
IPR017853 - Glycoside hydrolase superfamily
IPR031330 - Glycoside hydrolase 35, catalytic domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7036874.1 Beta-galactosidase 8 [Cucurbita argyrosperma subsp. argyrosperma]3.4e-2969.72Show/hide
Query:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH
        VVLLVLGVL SFSL  AANVTYDHRALVI+GKRRVLVSGSIHYPRSTP                         +MWPDLIQKSK+GGLDVIETYVFWNLH
Subjt:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH

Query:  EPVRNQVHF
        EPVRNQ  F
Subjt:  EPVRNQVHF

XP_022156948.1 beta-galactosidase 8 [Momordica charantia]5.5e-3272.48Show/hide
Query:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH
        VVLLVLGVLAS SLANAANVTYDHRALVI+GKRRVLVSGSIHYPRSTP                         +MWPDLIQKSKEGGLDVIETYVFWNLH
Subjt:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH

Query:  EPVRNQVHF
        EPVRNQ  F
Subjt:  EPVRNQVHF

XP_022948717.1 beta-galactosidase 8-like [Cucurbita moschata]3.4e-2969.72Show/hide
Query:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH
        VVLLVLGVL SFSL  AANVTYDHRALVI+GKRRVLVSGSIHYPRSTP                         +MWPDLIQKSK+GGLDVIETYVFWNLH
Subjt:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH

Query:  EPVRNQVHF
        EPVRNQ  F
Subjt:  EPVRNQVHF

XP_022997931.1 beta-galactosidase 8-like [Cucurbita maxima]1.3e-2868.81Show/hide
Query:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH
        VVLLVLGVL SFSL  AANVTYDHRALVI+GKRRVLVSGSIHYPRSTP                         +MWPDLIQKSK+GGLDVIETYVFWNLH
Subjt:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH

Query:  EPVRNQVHF
        EP RNQ  F
Subjt:  EPVRNQVHF

XP_023523286.1 beta-galactosidase 8-like isoform X1 [Cucurbita pepo subsp. pepo]3.4e-2969.72Show/hide
Query:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH
        VVLLVLGVL SFSL  AANVTYDHRALVI+GKRRVLVSGSIHYPRSTP                         +MWPDLIQKSK+GGLDVIETYVFWNLH
Subjt:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH

Query:  EPVRNQVHF
        EPVRNQ  F
Subjt:  EPVRNQVHF

TrEMBL top hitse value%identityAlignment
A0A6J1DS30 Beta-galactosidase2.7e-3272.48Show/hide
Query:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH
        VVLLVLGVLAS SLANAANVTYDHRALVI+GKRRVLVSGSIHYPRSTP                         +MWPDLIQKSKEGGLDVIETYVFWNLH
Subjt:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH

Query:  EPVRNQVHF
        EPVRNQ  F
Subjt:  EPVRNQVHF

A0A6J1GAP4 Beta-galactosidase1.6e-2969.72Show/hide
Query:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH
        VVLLVLGVL SFSL  AANVTYDHRALVI+GKRRVLVSGSIHYPRSTP                         +MWPDLIQKSK+GGLDVIETYVFWNLH
Subjt:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH

Query:  EPVRNQVHF
        EPVRNQ  F
Subjt:  EPVRNQVHF

A0A6J1HIP2 Beta-galactosidase5.8e-2765.14Show/hide
Query:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH
        VVL+V GVL SFSL  AANVTYDHRALVI+G+RRVLVSGSIHYPRSTP                         +MWP LIQKS++GGLDVIETYVFWNLH
Subjt:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH

Query:  EPVRNQVHF
        EPVRNQ  F
Subjt:  EPVRNQVHF

A0A6J1I3D1 Beta-galactosidase1.2e-2766.06Show/hide
Query:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH
        VVL+V GVL SFSL  AANVTYDHRALVI+G+RRVLVSGSIHYPRSTP                         +MWP LIQKSK+GGLDVIETYVFWNLH
Subjt:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH

Query:  EPVRNQVHF
        EPVRNQ +F
Subjt:  EPVRNQVHF

A0A6J1KCX5 Beta-galactosidase6.2e-2968.81Show/hide
Query:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH
        VVLLVLGVL SFSL  AANVTYDHRALVI+GKRRVLVSGSIHYPRSTP                         +MWPDLIQKSK+GGLDVIETYVFWNLH
Subjt:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH

Query:  EPVRNQVHF
        EP RNQ  F
Subjt:  EPVRNQVHF

SwissProt top hitse value%identityAlignment
A2X2H7 Beta-galactosidase 44.9e-2351.38Show/hide
Query:  LLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEP
        L+   + AS  +ANAA V+YD R+LVING+RR+L+SGSIHYPRSTP                         +MWP LIQK+K+GGLDVI+TYVFWN HEP
Subjt:  LLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEP

Query:  VRNQVHFAN
        V+ Q +F++
Subjt:  VRNQVHFAN

Q10NX8 Beta-galactosidase 69.9e-2455.86Show/hide
Query:  LLVLGVLASFSL----ANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWN
        LL+L V+   SL    + AANVTYDHRA+VI+G RRVLVSGSIHYPRSTP                          MWP LIQKSK+GGLDVIETYVFW+
Subjt:  LLVLGVLASFSL----ANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWN

Query:  LHEPVRNQVHF
        +HE VR Q  F
Subjt:  LHEPVRNQVHF

Q5Z7L0 Beta-galactosidase 95.2e-2553.1Show/hide
Query:  GGVVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWN
        GG V  +L ++A+ ++ANAA VTYDHR+L ING+RR+L+SGSIHYPRSTP                         +MWPDLIQK+K+GGLDVI+TYVFWN
Subjt:  GGVVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWN

Query:  LHEPVRNQVHFAN
         HEPV+ Q +F++
Subjt:  LHEPVRNQVHFAN

Q6Z6K4 Beta-galactosidase 44.9e-2351.38Show/hide
Query:  LLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEP
        L+   + AS  +ANAA V+YD R+LVING+RR+L+SGSIHYPRSTP                         +MWP LIQK+K+GGLDVI+TYVFWN HEP
Subjt:  LLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEP

Query:  VRNQVHFAN
        V+ Q +F++
Subjt:  VRNQVHFAN

Q9SCV4 Beta-galactosidase 86.8e-2554.13Show/hide
Query:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH
        ++LL+L ++ +   A AANVTYDHRALVI+GKR+VL+SGSIHYPRSTP                         +MWP+LIQKSK+GGLDVIETYVFW+ H
Subjt:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH

Query:  EPVRNQVHF
        EP +N+ +F
Subjt:  EPVRNQVHF

Arabidopsis top hitse value%identityAlignment
AT2G28470.1 beta-galactosidase 84.8e-2654.13Show/hide
Query:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH
        ++LL+L ++ +   A AANVTYDHRALVI+GKR+VL+SGSIHYPRSTP                         +MWP+LIQKSK+GGLDVIETYVFW+ H
Subjt:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH

Query:  EPVRNQVHF
        EP +N+ +F
Subjt:  EPVRNQVHF

AT2G28470.2 beta-galactosidase 84.8e-2654.13Show/hide
Query:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH
        ++LL+L ++ +   A AANVTYDHRALVI+GKR+VL+SGSIHYPRSTP                         +MWP+LIQKSK+GGLDVIETYVFW+ H
Subjt:  VVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLH

Query:  EPVRNQVHF
        EP +N+ +F
Subjt:  EPVRNQVHF

AT3G52840.1 beta-galactosidase 22.3e-2350Show/hide
Query:  LVLGVLASFSLANA--ANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHE
        ++L +L   SL ++  A VTYDH+AL+ING+RR+L+SGSIHYPRSTP                         +MWPDLI+K+KEGGLDVI+TYVFWN HE
Subjt:  LVLGVLASFSLANA--ANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHE

Query:  PVRNQVHF
        P     +F
Subjt:  PVRNQVHF

AT4G26140.1 beta-galactosidase 121.1e-2250Show/hide
Query:  LVLGVLASFSL--ANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHE
        ++LG+L   SL  +  A VTYD +A++ING+RR+L+SGSIHYPRSTP                         +MWPDLIQK+K+GGLDVI+TYVFWN HE
Subjt:  LVLGVLASFSL--ANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHE

Query:  PVRNQVHF
        P   Q +F
Subjt:  PVRNQVHF

AT4G26140.2 beta-galactosidase 121.1e-2250Show/hide
Query:  LVLGVLASFSL--ANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHE
        ++LG+L   SL  +  A VTYD +A++ING+RR+L+SGSIHYPRSTP                         +MWPDLIQK+K+GGLDVI+TYVFWN HE
Subjt:  LVLGVLASFSL--ANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHE

Query:  PVRNQVHF
        P   Q +F
Subjt:  PVRNQVHF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGTTCAATTTGCGGTGGTGTTGTTTTGTTGGTTCTCGGCGTTTTAGCCTCCTTCTCGCTTGCCAATGCCGCCAATGTGACGTATGATCACCGGGCGTTGGTGATCAACGG
CAAGCGGAGAGTCTTGGTTTCTGGATCTATACACTATCCTCGCAGTACCCCGAGGTTTGTTTTCTTCATTCTCCACACTTCAATGTTTCTGTTTGAATCAGTCTTGAGTT
TATACCTCTGGAATCTTCAGATGTGGCCGGACCTTATTCAGAAATCGAAGGAGGGAGGTTTGGATGTAATCGAGACTTATGTGTTCTGGAATTTACATGAACCAGTTCGA
AACCAGGTACATTTTGCGAATTCTTCG
mRNA sequenceShow/hide mRNA sequence
AGTTCAATTTGCGGTGGTGTTGTTTTGTTGGTTCTCGGCGTTTTAGCCTCCTTCTCGCTTGCCAATGCCGCCAATGTGACGTATGATCACCGGGCGTTGGTGATCAACGG
CAAGCGGAGAGTCTTGGTTTCTGGATCTATACACTATCCTCGCAGTACCCCGAGGTTTGTTTTCTTCATTCTCCACACTTCAATGTTTCTGTTTGAATCAGTCTTGAGTT
TATACCTCTGGAATCTTCAGATGTGGCCGGACCTTATTCAGAAATCGAAGGAGGGAGGTTTGGATGTAATCGAGACTTATGTGTTCTGGAATTTACATGAACCAGTTCGA
AACCAGGTACATTTTGCGAATTCTTCG
Protein sequenceShow/hide protein sequence
SSICGGVVLLVLGVLASFSLANAANVTYDHRALVINGKRRVLVSGSIHYPRSTPRFVFFILHTSMFLFESVLSLYLWNLQMWPDLIQKSKEGGLDVIETYVFWNLHEPVR
NQVHFANSS