; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013986 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013986
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold607:1429197..1429577
RNA-Seq ExpressionMS013986
SyntenyMS013986
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595353.1 hypothetical protein SDJN03_11906, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2159.06Show/hide
Query:  MARFLFILFIFANTFLNSVVVVGAEFGAAPSPISTGAEPPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGDHQHHNHKASDKSIAGGGV
        MA FLF+LFIFA+  L+S  V               AEPPSARKLG H SAAAVS  SSPSEAP+SE+KV                +HK+ D SIAGGGV
Subjt:  MARFLFILFIFANTFLNSVVVVGAEFGAAPSPISTGAEPPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGDHQHHNHKASDKSIAGGGV

Query:  ILGGLATTFLVAIICYIRATRRSNSEV
        ILGGLATTF VAIICYIRAT+R NSEV
Subjt:  ILGGLATTFLVAIICYIRATRRSNSEV

KAG6603622.1 hypothetical protein SDJN03_04231, partial [Cucurbita argyrosperma subsp. sororia]5.4e-2563.49Show/hide
Query:  MARFLFILFIFANTFLNSVVVVGAEFGAAPSPISTGAEPPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGD--HQHHNHKASDKSIAGG
        MA FLF+LFIFAN  L SV V     GAAP P  T AEPPS RKLGKH S A V   SSPSEAPRSE KV   +   T        H +HK+ DKS+AGG
Subjt:  MARFLFILFIFANTFLNSVVVVGAEFGAAPSPISTGAEPPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGD--HQHHNHKASDKSIAGG

Query:  GVILGGLATTFLVAIICYIRATRRSN
        GVILGGLATTFLVAI+CYIRATRR +
Subjt:  GVILGGLATTFLVAIICYIRATRRSN

KGN54308.1 hypothetical protein Csa_017945 [Cucumis sativus]1.3e-2360.31Show/hide
Query:  FLFILFIFANTFLNSVVVVGAEFGAAPSPISTGAEPPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAA-------ATNGGDHQHHNHKASDKSIA
        FLF+LFIFAN   +S+        AA +P  T AE PS RKLGKH+S A   + SSP+EAPRS MKVQ TS A       A   G+H H  HK+ DKSIA
Subjt:  FLFILFIFANTFLNSVVVVGAEFGAAPSPISTGAEPPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAA-------ATNGGDHQHHNHKASDKSIA

Query:  GGGVILGGLATTFLVAIICYIRATRRSNSEV
        GGGVILGGLATTFLVA+ICYIRATRR  SE+
Subjt:  GGGVILGGLATTFLVAIICYIRATRRSNSEV

XP_008448528.1 PREDICTED: uncharacterized protein LOC103490675 [Cucumis melo]3.1e-2563.36Show/hide
Query:  FLFILFIFANTFLNSVVVVGAEFGAAPSPISTGAEPPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAA-------ATNGGDHQHHNHKASDKSIA
        FLF+LFIFAN F +S+        AA +P  T AE PS RKLGKH+S A   + SSP EAPRSEMKVQ TSAA       A   G+H H  HK+ DKSIA
Subjt:  FLFILFIFANTFLNSVVVVGAEFGAAPSPISTGAEPPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAA-------ATNGGDHQHHNHKASDKSIA

Query:  GGGVILGGLATTFLVAIICYIRATRRSNSEV
        GGGVILGGLATTFLVAIICYIRATRR  SE+
Subjt:  GGGVILGGLATTFLVAIICYIRATRRSNSEV

XP_022151558.1 uncharacterized protein LOC111019472 [Momordica charantia]1.2e-5698.43Show/hide
Query:  MARFLFILFIFANTFLNSVVVVGAEFGAAPSPISTGAEPPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGDHQHHNHKASDKSIAGGGV
        MARFLFILFIFAN FLNSVVVVGAEFGAAPSPISTGAE PSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGDHQHHNHKASDKSIAGGGV
Subjt:  MARFLFILFIFANTFLNSVVVVGAEFGAAPSPISTGAEPPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGDHQHHNHKASDKSIAGGGV

Query:  ILGGLATTFLVAIICYIRATRRSNSEV
        ILGGLATTFLVAIICYIRATRRSNSEV
Subjt:  ILGGLATTFLVAIICYIRATRRSNSEV

TrEMBL top hitse value%identityAlignment
A0A0A0KXQ0 Uncharacterized protein6.4e-2460.31Show/hide
Query:  FLFILFIFANTFLNSVVVVGAEFGAAPSPISTGAEPPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAA-------ATNGGDHQHHNHKASDKSIA
        FLF+LFIFAN   +S+        AA +P  T AE PS RKLGKH+S A   + SSP+EAPRS MKVQ TS A       A   G+H H  HK+ DKSIA
Subjt:  FLFILFIFANTFLNSVVVVGAEFGAAPSPISTGAEPPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAA-------ATNGGDHQHHNHKASDKSIA

Query:  GGGVILGGLATTFLVAIICYIRATRRSNSEV
        GGGVILGGLATTFLVA+ICYIRATRR  SE+
Subjt:  GGGVILGGLATTFLVAIICYIRATRRSNSEV

A0A1R3JR29 Uncharacterized protein6.6e-1344.22Show/hide
Query:  FLFILFIFANTF--LNSVVVVGAEFGAAPSPISTGAEPPSARKLGKHRSAAAVSSG-------SSPSEAPRSEMKVQ-----ATSAAATNGGDH------
        FL I  I  N F  + S      +   AP+P    A PPS RKLGKH+  A V          +SPSEAP++E +         SAA  N G+H      
Subjt:  FLFILFIFANTF--LNSVVVVGAEFGAAPSPISTGAEPPSARKLGKHRSAAAVSSG-------SSPSEAPRSEMKVQ-----ATSAAATNGGDH------

Query:  -----QHHNHKASDKSIAGGGVILGGLATTFLVAIICYIRATRRSNS
             +HH++ + DKS+AGGGVILGGLATTFLVA+ CYIRAT R  S
Subjt:  -----QHHNHKASDKSIAGGGVILGGLATTFLVAIICYIRATRRSNS

A0A1S3BJV8 uncharacterized protein LOC1034906751.5e-2563.36Show/hide
Query:  FLFILFIFANTFLNSVVVVGAEFGAAPSPISTGAEPPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAA-------ATNGGDHQHHNHKASDKSIA
        FLF+LFIFAN F +S+        AA +P  T AE PS RKLGKH+S A   + SSP EAPRSEMKVQ TSAA       A   G+H H  HK+ DKSIA
Subjt:  FLFILFIFANTFLNSVVVVGAEFGAAPSPISTGAEPPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAA-------ATNGGDHQHHNHKASDKSIA

Query:  GGGVILGGLATTFLVAIICYIRATRRSNSEV
        GGGVILGGLATTFLVAIICYIRATRR  SE+
Subjt:  GGGVILGGLATTFLVAIICYIRATRRSNSEV

A0A5A7TSM2 Uncharacterized protein1.5e-2563.36Show/hide
Query:  FLFILFIFANTFLNSVVVVGAEFGAAPSPISTGAEPPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAA-------ATNGGDHQHHNHKASDKSIA
        FLF+LFIFAN F +S+        AA +P  T AE PS RKLGKH+S A   + SSP EAPRSEMKVQ TSAA       A   G+H H  HK+ DKSIA
Subjt:  FLFILFIFANTFLNSVVVVGAEFGAAPSPISTGAEPPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAA-------ATNGGDHQHHNHKASDKSIA

Query:  GGGVILGGLATTFLVAIICYIRATRRSNSEV
        GGGVILGGLATTFLVAIICYIRATRR  SE+
Subjt:  GGGVILGGLATTFLVAIICYIRATRRSNSEV

A0A6J1DCH7 uncharacterized protein LOC1110194725.7e-5798.43Show/hide
Query:  MARFLFILFIFANTFLNSVVVVGAEFGAAPSPISTGAEPPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGDHQHHNHKASDKSIAGGGV
        MARFLFILFIFAN FLNSVVVVGAEFGAAPSPISTGAE PSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGDHQHHNHKASDKSIAGGGV
Subjt:  MARFLFILFIFANTFLNSVVVVGAEFGAAPSPISTGAEPPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGDHQHHNHKASDKSIAGGGV

Query:  ILGGLATTFLVAIICYIRATRRSNSEV
        ILGGLATTFLVAIICYIRATRRSNSEV
Subjt:  ILGGLATTFLVAIICYIRATRRSNSEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09280.1 unknown protein4.7e-1144.94Show/hide
Query:  STGAEPPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGDHQHHNHKASDKSIAGGGVILGGLATTFLVAIICYIRATRR
        S+ AEPP+ RKLG+H             E P  E   +A   +       + H+H   ++S+AGGGVILGGLATTFLV + CYIRATR+
Subjt:  STGAEPPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGDHQHHNHKASDKSIAGGGVILGGLATTFLVAIICYIRATRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGATTTCTATTCATCCTCTTCATCTTCGCCAATACATTTCTGAATTCCGTCGTCGTCGTCGGTGCCGAGTTCGGAGCCGCTCCGTCGCCGATCTCGACCGGAGC
CGAACCGCCTTCCGCTAGAAAGCTCGGGAAGCACCGGAGTGCGGCGGCTGTTTCTTCCGGCTCGAGTCCGTCTGAAGCGCCGCGGAGCGAAATGAAAGTTCAGGCGACCT
CGGCGGCGGCGACGAACGGAGGAGATCATCAGCATCACAATCACAAGGCGAGCGATAAGTCAATCGCCGGCGGCGGCGTGATTTTGGGTGGACTCGCCACCACGTTTCTG
GTGGCGATTATCTGCTACATTAGGGCAACGCGGAGATCGAACTCAGAAGTG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCGATTTCTATTCATCCTCTTCATCTTCGCCAATACATTTCTGAATTCCGTCGTCGTCGTCGGTGCCGAGTTCGGAGCCGCTCCGTCGCCGATCTCGACCGGAGC
CGAACCGCCTTCCGCTAGAAAGCTCGGGAAGCACCGGAGTGCGGCGGCTGTTTCTTCCGGCTCGAGTCCGTCTGAAGCGCCGCGGAGCGAAATGAAAGTTCAGGCGACCT
CGGCGGCGGCGACGAACGGAGGAGATCATCAGCATCACAATCACAAGGCGAGCGATAAGTCAATCGCCGGCGGCGGCGTGATTTTGGGTGGACTCGCCACCACGTTTCTG
GTGGCGATTATCTGCTACATTAGGGCAACGCGGAGATCGAACTCAGAAGTG
Protein sequenceShow/hide protein sequence
MARFLFILFIFANTFLNSVVVVGAEFGAAPSPISTGAEPPSARKLGKHRSAAAVSSGSSPSEAPRSEMKVQATSAAATNGGDHQHHNHKASDKSIAGGGVILGGLATTFL
VAIICYIRATRRSNSEV