; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS013994 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS013994
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionfasciclin-like arabinogalactan protein 11
Genome locationscaffold607:1506785..1507012
RNA-Seq ExpressionMS013994
SyntenyMS013994
Gene Ontology termsGO:0009834 - plant-type secondary cell wall biogenesis (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR036378 - FAS1 domain superfamily
IPR045003 - Fasciclin-like arabinogalactan protein, group A


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604433.1 Fasciclin-like arabinogalactan protein 11, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2587.84Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV
        V+LVQFHVLPNF+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT VVDAVVANTIYTDGQL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV

XP_022151508.1 fasciclin-like arabinogalactan protein 11 [Momordica charantia]1.1e-3097.37Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHVTS
        V+LVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANT YTDGQLVVYHVTS
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHVTS

XP_022925941.1 fasciclin-like arabinogalactan protein 11 [Cucurbita moschata]1.1e-2587.84Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV
        V+LVQFHVLPNF+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT VVDAVVANTIYTDGQL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV

XP_022979163.1 fasciclin-like arabinogalactan protein 11 [Cucurbita maxima]1.1e-2587.84Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV
        V+LVQFHVLPNF+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT VVDAVVANTIYTDGQL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV

XP_023543377.1 fasciclin-like arabinogalactan protein 11 [Cucurbita pepo subsp. pepo]1.1e-2587.84Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV
        V+LVQFHVLPNF+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT VVDAVVANTIYTDGQL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV

TrEMBL top hitse value%identityAlignment
A0A0A0KH46 FAS1 domain-containing protein1.3e-2483.78Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV
        V+LVQ+HV+P F+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT VVDAVVANTIYTDGQL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV

A0A5A7TVT2 Fasciclin-like arabinogalactan protein 118.5e-2482.43Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV
        V+LVQ+HV+P F+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT V DAVVANTIYTDGQL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV

A0A6J1DCD1 fasciclin-like arabinogalactan protein 115.5e-3197.37Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHVTS
        V+LVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANT YTDGQLVVYHVTS
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHVTS

A0A6J1EDI6 fasciclin-like arabinogalactan protein 115.3e-2687.84Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV
        V+LVQFHVLPNF+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT VVDAVVANTIYTDGQL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV

A0A6J1IVC0 fasciclin-like arabinogalactan protein 115.3e-2687.84Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV
        V+LVQFHVLPNF+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT VVDAVVANTIYTDGQL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV

SwissProt top hitse value%identityAlignment
Q8LEE9 Fasciclin-like arabinogalactan protein 126.7e-1859.46Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV
        VEL+QFHV+P++VS S F ++SNPLRTQAG+S    FPLNVTTSG+ VN T+ V +  V+  +Y+DGQL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV

Q8LEJ6 Fasciclin-like arabinogalactan protein 112.7e-1963.51Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV
        V+LVQFHVLP  ++M QF +VSNPLRTQAG+    +FPLN+T+SG+QVN TT VV A VAN++Y+D QL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV

Q9FFH6 Fasciclin-like arabinogalactan protein 131.7e-0540Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQA-GNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV
        V+L+ +HV P F ++    SVSNP+RTQA G      + LN T  G+QVN +T VV+  ++ ++  +  L VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQA-GNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV

Q9SIL7 Fasciclin-like arabinogalactan protein 61.1e-0435.9Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVT--TSGSQVNFTTSVVDAVVANTIYTDGQLVVYHVTS
        ++L+ +H++P + S+S     SNP+RTQA   +   F LN T     +QVN +T VV+  + N +     L VY V S
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVT--TSGSQVNFTTSVVDAVVANTIYTDGQLVVYHVTS

Q9ZWA8 Fasciclin-like arabinogalactan protein 91.0e-0537.84Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV
        V+L+ +HV P + SM    SVSNP+RTQA   +   + LN T   +Q+N +T  V+  ++N++     L VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV

Arabidopsis top hitse value%identityAlignment
AT1G03870.1 FASCICLIN-like arabinoogalactan 97.2e-0737.84Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV
        V+L+ +HV P + SM    SVSNP+RTQA   +   + LN T   +Q+N +T  V+  ++N++     L VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV

AT2G20520.1 FASCICLIN-like arabinogalactan 67.9e-0635.9Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVT--TSGSQVNFTTSVVDAVVANTIYTDGQLVVYHVTS
        ++L+ +H++P + S+S     SNP+RTQA   +   F LN T     +QVN +T VV+  + N +     L VY V S
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVT--TSGSQVNFTTSVVDAVVANTIYTDGQLVVYHVTS

AT5G03170.1 FASCICLIN-like arabinogalactan-protein 111.9e-2063.51Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV
        V+LVQFHVLP  ++M QF +VSNPLRTQAG+    +FPLN+T+SG+QVN TT VV A VAN++Y+D QL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV

AT5G44130.1 FASCICLIN-like arabinogalactan protein 13 precursor1.2e-0640Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQA-GNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV
        V+L+ +HV P F ++    SVSNP+RTQA G      + LN T  G+QVN +T VV+  ++ ++  +  L VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQA-GNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV

AT5G60490.1 FASCICLIN-like arabinogalactan-protein 124.8e-1959.46Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV
        VEL+QFHV+P++VS S F ++SNPLRTQAG+S    FPLNVTTSG+ VN T+ V +  V+  +Y+DGQL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTGAGCTGGTTCAGTTCCATGTCCTCCCAAATTTCGTTTCCATGTCCCAATTTCATTCCGTCAGCAACCCTCTTCGTACCCAGGCCGGAAACAGCAACGCCCGCCAGTT
TCCCCTGAATGTTACCACTTCTGGGTCTCAGGTCAATTTTACCACCAGCGTCGTCGACGCCGTCGTCGCCAACACCATTTACACCGACGGCCAACTTGTCGTTTACCACG
TCACCAGC
mRNA sequenceShow/hide mRNA sequence
GTTGAGCTGGTTCAGTTCCATGTCCTCCCAAATTTCGTTTCCATGTCCCAATTTCATTCCGTCAGCAACCCTCTTCGTACCCAGGCCGGAAACAGCAACGCCCGCCAGTT
TCCCCTGAATGTTACCACTTCTGGGTCTCAGGTCAATTTTACCACCAGCGTCGTCGACGCCGTCGTCGCCAACACCATTTACACCGACGGCCAACTTGTCGTTTACCACG
TCACCAGC
Protein sequenceShow/hide protein sequence
VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHVTS