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MS014049 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014049
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionAdaptin ear-binding coat-associated protein 1 NECAP-1 isoform 2
Genome locationscaffold5:208873..208989
RNA-Seq ExpressionMS014049
SyntenyMS014049
Gene Ontology termsGO:0006897 - endocytosis (biological process)
GO:0030125 - clathrin vesicle coat (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034895.1 hypothetical protein SDJN02_01688 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-0784.21Show/hide
Query:  MEEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYLV
        MEEQQKTA DQ +KEDHEEN+AIE+VLFQVSECYVYL+
Subjt:  MEEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYLV
XP_022149778.1 uncharacterized protein At1g03900 [Momordica charantia]9.7e-1097.37Show/hide
Query:  MEEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYLV
        MEEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYL+
Subjt:  MEEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYLV
XP_022947234.1 uncharacterized protein At1g03900 [Cucurbita moschata]1.5e-0784.21Show/hide
Query:  MEEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYLV
        MEEQQKTA DQ +KEDHEEN+AIE+VLFQVSECYVYL+
Subjt:  MEEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYLV
XP_022970894.1 uncharacterized protein At1g03900 [Cucurbita maxima]1.5e-0784.21Show/hide
Query:  MEEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYLV
        MEEQQKTA DQ +KEDHEEN+AIE+VLFQVSECYVYL+
Subjt:  MEEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYLV
XP_023534216.1 uncharacterized protein At1g03900 [Cucurbita pepo subsp. pepo]1.5e-0784.21Show/hide
Query:  MEEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYLV
        MEEQQKTA DQ +KEDHEEN+AIE+VLFQVSECYVYL+
Subjt:  MEEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYLV
TrEMBL top hitse value%identityAlignment
A0A5A7UGZ1 Adaptin ear-binding coat-associated protein 1 NECAP-1 isoform 21.3e-0467.57Show/hide
Query:  EEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYLV
        E+QQKT  +Q +++DHE+NEAIE+VLFQV ECYVYL+
Subjt:  EEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYLV
A0A6J1D7P3 uncharacterized protein At1g039004.7e-1097.37Show/hide
Query:  MEEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYLV
        MEEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYL+
Subjt:  MEEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYLV
A0A6J1FX33 uncharacterized protein At1g03900-like1.1e-0681.08Show/hide
Query:  EEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYLV
        E+QQKTA DQ ++EDHEENEAIE+VLFQVSECYVYL+
Subjt:  EEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYLV
A0A6J1G674 uncharacterized protein At1g039007.5e-0884.21Show/hide
Query:  MEEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYLV
        MEEQQKTA DQ +KEDHEEN+AIE+VLFQVSECYVYL+
Subjt:  MEEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYLV
A0A6J1I6Z7 uncharacterized protein At1g039007.5e-0884.21Show/hide
Query:  MEEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYLV
        MEEQQKTA DQ +KEDHEEN+AIE+VLFQVSECYVYL+
Subjt:  MEEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYLV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G58600.1 Adaptin ear-binding coat-associated protein 1 NECAP-11.2e-0558.97Show/hide
Query:  SMEEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYLV
        +MEE +K++ D    +D+EE EAIEI LFQV ECYVYL+
Subjt:  SMEEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYLV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCATGGAGGAGCAGCAGAAGACGGCGAACGATCAAGCAGTCAAGGAGGATCACGAGGAGAATGAAGCAATTGAGATTGTTCTCTTTCAAGTTTCTGAATGTTATGTCTA
TTTGGTA
mRNA sequenceShow/hide mRNA sequence
TCCATGGAGGAGCAGCAGAAGACGGCGAACGATCAAGCAGTCAAGGAGGATCACGAGGAGAATGAAGCAATTGAGATTGTTCTCTTTCAAGTTTCTGAATGTTATGTCTA
TTTGGTA
Protein sequenceShow/hide protein sequence
SMEEQQKTANDQAVKEDHEENEAIEIVLFQVSECYVYLV