CuGenDBv2

Gene ID	MS014056
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	CLAVATA3/ESR (CLE)-related protein 6-like
Genome location	scaffold5:243107..243325
RNA-Seq Expression	MS014056
Synteny	MS014056
Gene Ontology terms	GO:0030154 - cell differentiation (biological process) GO:2000023 - regulation of lateral root development (biological process) GO:2000067 - regulation of root morphogenesis (biological process) GO:0005576 - extracellular region (cellular component) GO:0033612 - receptor serine/threonine kinase binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8076036.1 hypothetical protein FH972_014710 [Carpinus fangiana]

3.5e-05

50.62

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Query:  MAVSTSFRVLILLF-IFSTLLMISQGHVLRFEK--QKDISSQRLLQEFKFDVFK---IERRSL--ITSERIVPGGPDPKHH
        MA  T  RV ILL  I STL M SQ  +L  E+  QK+I SQ+LLQE  FD+ K   ++RRSL   + +++VPGGPD +HH
Subjt:  MAVSTSFRVLILLF-IFSTLLMISQGHVLRFEK--QKDISSQRLLQEFKFDVFK---IERRSL--ITSERIVPGGPDPKHH

KAG7568811.1 hypothetical protein ISN45_Aa04g015960 [Arabidopsis thaliana x Arabidopsis arenosa]

1.3e-04

44.44

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Query:  VLILLFIFSTLLMISQGHVLRFEK---QKDISSQRLLQEFKFDVFKI----ERRSLITSERIVPGGPDPKHH
        ++ILL IFS+ ++ SQ  +LR  +     ++ SQ LL E  FD+ K     ERR L++S+R+ PGGPDP+HH
Subjt:  VLILLFIFSTLLMISQGHVLRFEK---QKDISSQRLLQEFKFDVFKI----ERRSLITSERIVPGGPDPKHH

NP_565713.1 CLAVATA3/ESR-RELATED 6 [Arabidopsis thaliana]

1.3e-04

45.83

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Query:  VLILLFIFSTLLMISQGHVLRFEK---QKDISSQRLLQEFKFDVFKI----ERRSLITSERIVPGGPDPKHH
        ++ILL I+ST ++ SQ  +LR  +     D+ SQ LL+E   D+ K     ERR L+ SER+ PGGPDP+HH
Subjt:  VLILLFIFSTLLMISQGHVLRFEK---QKDISSQRLLQEFKFDVFKI----ERRSLITSERIVPGGPDPKHH

XP_002879304.1 CLAVATA3/ESR (CLE)-related protein 5 [Arabidopsis lyrata subsp. lyrata]

1.3e-04

44.44

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Query:  VLILLFIFSTLLMISQGHVLRFEK---QKDISSQRLLQEFKFDVFKI----ERRSLITSERIVPGGPDPKHH
        ++ILL IFS+  + SQ  +LR  +     ++ SQ LL+E  FD+ K     ERR L++S+R+ PGGPDP+HH
Subjt:  VLILLFIFSTLLMISQGHVLRFEK---QKDISSQRLLQEFKFDVFKI----ERRSLITSERIVPGGPDPKHH

XP_022149633.1 CLAVATA3/ESR (CLE)-related protein 6-like [Momordica charantia]

6.0e-29

98.63

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Query:  MAVSTSFRVLILLFIFSTLLMISQGHVLRFEKQKDISSQRLLQEFKFDVFKIERRSLITSERIVPGGPDPKHH
        MAVSTS RVLILLFIFSTLLMISQGHVLRFEKQKDISSQRLLQEFKFDVFKIERRSLITSERIVPGGPDPKHH
Subjt:  MAVSTSFRVLILLFIFSTLLMISQGHVLRFEKQKDISSQRLLQEFKFDVFKIERRSLITSERIVPGGPDPKHH

TrEMBL top hits

e value

%identity

Alignment

A0A178VSR3 CLE6

6.5e-05

45.83

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Query:  VLILLFIFSTLLMISQGHVLRFEK---QKDISSQRLLQEFKFDVFKI----ERRSLITSERIVPGGPDPKHH
        ++ILL I+ST ++ SQ  +LR  +     D+ SQ LL+E   D+ K     ERR L+ SER+ PGGPDP+HH
Subjt:  VLILLFIFSTLLMISQGHVLRFEK---QKDISSQRLLQEFKFDVFKI----ERRSLITSERIVPGGPDPKHH

A0A5N6RCE3 Uncharacterized protein

1.7e-05

50.62

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Query:  MAVSTSFRVLILLF-IFSTLLMISQGHVLRFEK--QKDISSQRLLQEFKFDVFK---IERRSL--ITSERIVPGGPDPKHH
        MA  T  RV ILL  I STL M SQ  +L  E+  QK+I SQ+LLQE  FD+ K   ++RRSL   + +++VPGGPD +HH
Subjt:  MAVSTSFRVLILLF-IFSTLLMISQGHVLRFEK--QKDISSQRLLQEFKFDVFK---IERRSL--ITSERIVPGGPDPKHH

A0A6D2KM98 Uncharacterized protein

1.1e-04

41.89

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Query:  VLILLFIFSTLLMISQGHVLRFEKQK-----DISSQRLLQEFKFDVFKI----ERRSLITSERIVPGGPDPKHH
        ++ILL +FS+ ++ SQ  +LR ++       ++ SQ LL+E  FD+ K     ERR L+ S+R+ PGGPDP+HH
Subjt:  VLILLFIFSTLLMISQGHVLRFEKQK-----DISSQRLLQEFKFDVFKI----ERRSLITSERIVPGGPDPKHH

A0A6J1D7A7 CLAVATA3/ESR (CLE)-related protein 6-like

2.9e-29

98.63

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Query:  MAVSTSFRVLILLFIFSTLLMISQGHVLRFEKQKDISSQRLLQEFKFDVFKIERRSLITSERIVPGGPDPKHH
        MAVSTS RVLILLFIFSTLLMISQGHVLRFEKQKDISSQRLLQEFKFDVFKIERRSLITSERIVPGGPDPKHH
Subjt:  MAVSTSFRVLILLFIFSTLLMISQGHVLRFEKQKDISSQRLLQEFKFDVFKIERRSLITSERIVPGGPDPKHH

D7LCY8 Uncharacterized protein

6.5e-05

44.44

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Query:  VLILLFIFSTLLMISQGHVLRFEK---QKDISSQRLLQEFKFDVFKI----ERRSLITSERIVPGGPDPKHH
        ++ILL IFS+  + SQ  +LR  +     ++ SQ LL+E  FD+ K     ERR L++S+R+ PGGPDP+HH
Subjt:  VLILLFIFSTLLMISQGHVLRFEK---QKDISSQRLLQEFKFDVFKI----ERRSLITSERIVPGGPDPKHH

SwissProt top hits

e value

%identity

Alignment

Q8S8N2 CLAVATA3/ESR (CLE)-related protein 5

8.8e-07

44.44

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Query:  VLILLFIFSTLLMISQGHVLRFEK---QKDISSQRLLQEFKFDVFKI----ERRSLITSERIVPGGPDPKHH
        ++ILL IFS   + SQ  +LR  +     ++ SQ LL E  FD+ K     ERR L++S+R+ PGGPDP+HH
Subjt:  VLILLFIFSTLLMISQGHVLRFEK---QKDISSQRLLQEFKFDVFKI----ERRSLITSERIVPGGPDPKHH

Q8S8N3 CLAVATA3/ESR (CLE)-related protein 6

1.8e-07

45.83

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Query:  VLILLFIFSTLLMISQGHVLRFEK---QKDISSQRLLQEFKFDVFKI----ERRSLITSERIVPGGPDPKHH
        ++ILL I+ST ++ SQ  +LR  +     D+ SQ LL+E   D+ K     ERR L+ SER+ PGGPDP+HH
Subjt:  VLILLFIFSTLLMISQGHVLRFEK---QKDISSQRLLQEFKFDVFKI----ERRSLITSERIVPGGPDPKHH

Arabidopsis top hits

e value

%identity

Alignment

AT2G31082.1 CLAVATA3/ESR-RELATED 7

7.1e-04

38.03

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Query:  ILLFIFSTLLMI--SQGHVLRF-EKQKDISSQRLLQEFKFDVFKIER--RSLITS---ERIVPGGPDPKHH
        +LLF+  T L++   +G +LR   K KD  S  LL+   ++V +++R  R L      +R  PGGPDP+HH
Subjt:  ILLFIFSTLLMI--SQGHVLRF-EKQKDISSQRLLQEFKFDVFKIER--RSLITS---ERIVPGGPDPKHH

AT2G31083.1 CLAVATA3/ESR-RELATED 5

6.2e-08

44.44

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Query:  VLILLFIFSTLLMISQGHVLRFEK---QKDISSQRLLQEFKFDVFKI----ERRSLITSERIVPGGPDPKHH
        ++ILL IFS   + SQ  +LR  +     ++ SQ LL E  FD+ K     ERR L++S+R+ PGGPDP+HH
Subjt:  VLILLFIFSTLLMISQGHVLRFEK---QKDISSQRLLQEFKFDVFKI----ERRSLITSERIVPGGPDPKHH

AT2G31085.1 CLAVATA3/ESR-RELATED 6

1.3e-08

45.83

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Query:  VLILLFIFSTLLMISQGHVLRFEK---QKDISSQRLLQEFKFDVFKI----ERRSLITSERIVPGGPDPKHH
        ++ILL I+ST ++ SQ  +LR  +     D+ SQ LL+E   D+ K     ERR L+ SER+ PGGPDP+HH
Subjt:  VLILLFIFSTLLMISQGHVLRFEK---QKDISSQRLLQEFKFDVFKI----ERRSLITSERIVPGGPDPKHH

Sequences

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CDS sequence

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ATGGCTGTTTCAACCTCTTTTCGTGTGTTAATTCTTCTCTTTATTTTTTCCACTCTTTTGATGATATCACAAGGACATGTTCTTCGTTTTGAAAAACAAAAGGACATAAG
CAGTCAACGTCTTTTGCAAGAATTTAAATTTGATGTCTTTAAGATCGAGCGGAGGTCTCTCATTACGTCGGAAAGAATTGTACCAGGTGGACCAGATCCAAAGCACCAT

mRNA sequence

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Protein sequence

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MAVSTSFRVLILLFIFSTLLMISQGHVLRFEKQKDISSQRLLQEFKFDVFKIERRSLITSERIVPGGPDPKHH

MS014056 (gene) of Bitter gourd (TR) v1 genome