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MS014063 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014063
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSmall ubiquitin-related modifier
Genome locationscaffold5:288184..289508
RNA-Seq ExpressionMS014063
SyntenyMS014063
Gene Ontology termsGO:0016925 - protein sumoylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0031386 - protein tag (molecular function)
GO:0044389 - ubiquitin-like protein ligase binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR022617 - Rad60/SUMO-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570548.1 Tyrosine-protein phosphatase DSP1, partial [Cucurbita argyrosperma subsp. sororia]6.5e-4595.1Show/hide
Query:  MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG
        MSGVTNT   QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Subjt:  MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG

Query:  ST
        S+
Subjt:  ST

XP_004150752.1 small ubiquitin-related modifier 1 [Cucumis sativus]2.2e-4596.08Show/hide
Query:  MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG
        MSGVTNT   QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Subjt:  MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG

Query:  ST
        ST
Subjt:  ST

XP_008456407.1 PREDICTED: small ubiquitin-related modifier 1 [Cucumis melo]6.5e-4595.1Show/hide
Query:  MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG
        MSGVTNT   QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Subjt:  MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG

Query:  ST
        S+
Subjt:  ST

XP_022149763.1 small ubiquitin-related modifier 1-like [Momordica charantia]1.8e-50100Show/hide
Query:  MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG
        MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG
Subjt:  MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG

Query:  STH
        STH
Subjt:  STH

XP_022986050.1 small ubiquitin-related modifier 1-like [Cucurbita maxima]3.8e-4595.1Show/hide
Query:  MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG
        MSGVTNTP   QEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Subjt:  MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG

Query:  ST
        S+
Subjt:  ST

TrEMBL top hitse value%identityAlignment
A0A0A0KDV8 Small ubiquitin-related modifier1.1e-4596.08Show/hide
Query:  MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG
        MSGVTNT   QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Subjt:  MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG

Query:  ST
        ST
Subjt:  ST

A0A5A7UHK7 Small ubiquitin-related modifier3.1e-4595.1Show/hide
Query:  MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG
        MSGVTNT   QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Subjt:  MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG

Query:  ST
        S+
Subjt:  ST

A0A6J1D7M3 Small ubiquitin-related modifier8.5e-51100Show/hide
Query:  MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG
        MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG
Subjt:  MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG

Query:  STH
        STH
Subjt:  STH

A0A6J1FTW7 Small ubiquitin-related modifier3.1e-4595.1Show/hide
Query:  MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG
        MSGVTNT   QQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Subjt:  MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG

Query:  ST
        S+
Subjt:  ST

A0A6J1JCZ0 Small ubiquitin-related modifier1.8e-4595.1Show/hide
Query:  MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG
        MSGVTNTP   QEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Subjt:  MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG

Query:  ST
        S+
Subjt:  ST

SwissProt top hitse value%identityAlignment
O13351 Ubiquitin-like protein pmt3/smt35.9e-2554.9Show/hide
Query:  SGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGS
        S +T T     ++D KP+ +  HINLKV GQD NEVFF+IK++T+  KLM  YC RQ   +NS+ FL DG R+R +QTP EL+MEDGD+I+A+L Q GG 
Subjt:  SGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGS

Query:  TH
        TH
Subjt:  TH

P55852 Small ubiquitin-related modifier 11.4e-4291.4Show/hide
Query:  NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGS
        +A QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFDGRRLR EQTPDEL+MEDGDEIDAMLHQTGGS
Subjt:  NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGS

P55857 Small ubiquitin-related modifier 11.9e-3987.37Show/hide
Query:  NAQQEEDKKP---NDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG
        +A  EEDKKP       AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+N+IAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG
Subjt:  NAQQEEDKKP---NDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG

Q9FLP5 Small ubiquitin-related modifier 31.5e-2056.18Show/hide
Query:  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG
        +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G R+ G +TPDEL+MEDGD IDA    +GG
Subjt:  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG

Q9FLP6 Small ubiquitin-related modifier 25.9e-4192.39Show/hide
Query:  NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG
        +A  EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Subjt:  NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG

Arabidopsis top hitse value%identityAlignment
AT4G26840.1 small ubiquitin-like modifier 19.9e-4491.4Show/hide
Query:  NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGS
        +A QEEDKKP D  AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD+NSIAFLFDGRRLR EQTPDEL+MEDGDEIDAMLHQTGGS
Subjt:  NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGS

AT5G55160.1 small ubiquitin-like modifier 24.2e-4292.39Show/hide
Query:  NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG
        +A  EEDKKP DQ AHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLR EQTPDELEMEDGDEIDAMLHQTGG
Subjt:  NAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG

AT5G55160.2 small ubiquitin-like modifier 22.5e-3980.95Show/hide
Query:  NAQQEEDKKPNDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAML
        +A  EEDKKP DQ AHINLKVKGQ             DGNEVFFRIKRSTQLKKLMNAYCDRQSVD NSIAFLFDGRRLR EQTPDELEMEDGDEIDAML
Subjt:  NAQQEEDKKPNDQSAHINLKVKGQ-------------DGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAML

Query:  HQTGG
        HQTGG
Subjt:  HQTGG

AT5G55170.1 small ubiquitin-like modifier 31.1e-2156.18Show/hide
Query:  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG
        +D KP D  Q AH+ LKVK QDG+EV F+ K+S  LKKLM  YCDR+ + L++ AF+F+G R+ G +TPDEL+MEDGD IDA    +GG
Subjt:  EDKKPND--QSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG

AT5G55856.1 Ubiquitin-like superfamily protein1.3e-1952.33Show/hide
Query:  DKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG
        DKKP   S+HI +KVK QD   V+FRIKR  +L+K+M+AY D+  V+++++ FLFDG R++  QTP+EL +ED DEI+A   Q GG
Subjt:  DKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGCGTCACAAACACACCGAATGCACAGCAAGAGGAAGACAAGAAGCCCAACGACCAATCGGCGCATATCAACCTTAAGGTCAAAGGCCAGGATGGGAATGAGGT
GTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTGATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTTGATGGTCGTCGTC
TTCGCGGAGAGCAGACTCCCGATGAGCTAGAGATGGAGGATGGTGATGAGATTGATGCAATGTTGCACCAGACTGGTGGATCTACTCAT
mRNA sequenceShow/hide mRNA sequence
ATGTCGGGCGTCACAAACACACCGAATGCACAGCAAGAGGAAGACAAGAAGCCCAACGACCAATCGGCGCATATCAACCTTAAGGTCAAAGGCCAGGATGGGAATGAGGT
GTTCTTCAGGATTAAAAGGAGCACTCAGCTGAAGAAACTGATGAATGCTTACTGTGATCGACAATCTGTGGATCTGAACTCCATTGCTTTTCTATTTGATGGTCGTCGTC
TTCGCGGAGAGCAGACTCCCGATGAGCTAGAGATGGAGGATGGTGATGAGATTGATGCAATGTTGCACCAGACTGGTGGATCTACTCAT
Protein sequenceShow/hide protein sequence
MSGVTNTPNAQQEEDKKPNDQSAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGSTH