; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS014078 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014078
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLOW QUALITY PROTEIN: putative F-box/LRR-repeat protein At3g18150
Genome locationscaffold5:422620..422853
RNA-Seq ExpressionMS014078
SyntenyMS014078
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149727.1 LOW QUALITY PROTEIN: putative F-box/LRR-repeat protein At3g18150 [Momordica charantia]7.1e-2070.51Show/hide
Query:  RSRRSMRLMRGEERVDRTKQLPRSIRLHILSLLTIEEVAKMIFVPPLRDAWTRIPNHTFEQNEFHDNNTGIPDAPHYN
        RSRR  RLMR EERVDR  QLP SIR+ ILS L  +EV KMI VPP RD WTR  N TF+QNEFHD+N+ IPDAPHYN
Subjt:  RSRRSMRLMRGEERVDRTKQLPRSIRLHILSLLTIEEVAKMIFVPPLRDAWTRIPNHTFEQNEFHDNNTGIPDAPHYN
TrEMBL top hitse value%identityAlignment
A0A1R3GTU6 Zinc finger, CCCH-type7.7e-0441.18Show/hide
Query:  EERVDRTKQLPRSIRLHILSLLTIEEVAKMIFVPPLRDAWTRIPNHTFEQNEFHDNNTGI-PDAPHYN
        EE  DR   LP +I +HILS L I++  K + VP  R+ W  +P+ +F Q  +HD  +    D PHYN
Subjt:  EERVDRTKQLPRSIRLHILSLLTIEEVAKMIFVPPLRDAWTRIPNHTFEQNEFHDNNTGI-PDAPHYN
A0A6J1D8S4 LOW QUALITY PROTEIN: putative F-box/LRR-repeat protein At3g181503.4e-2070.51Show/hide
Query:  RSRRSMRLMRGEERVDRTKQLPRSIRLHILSLLTIEEVAKMIFVPPLRDAWTRIPNHTFEQNEFHDNNTGIPDAPHYN
        RSRR  RLMR EERVDR  QLP SIR+ ILS L  +EV KMI VPP RD WTR  N TF+QNEFHD+N+ IPDAPHYN
Subjt:  RSRRSMRLMRGEERVDRTKQLPRSIRLHILSLLTIEEVAKMIFVPPLRDAWTRIPNHTFEQNEFHDNNTGIPDAPHYN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGATCACGTCGATCAATGAGACTGATGAGGGGAGAAGAACGAGTTGATAGGACTAAACAACTTCCACGTTCTATTCGTCTTCACATTCTCTCGTTGTTAACAATCGAAGA
GGTTGCGAAGATGATATTTGTTCCACCATTAAGGGATGCGTGGACTCGTATTCCCAATCACACCTTCGAACAGAATGAATTTCATGACAATAATACTGGTATTCCTGATG
CTCCACATTACAAC
mRNA sequenceShow/hide mRNA sequence
CGATCACGTCGATCAATGAGACTGATGAGGGGAGAAGAACGAGTTGATAGGACTAAACAACTTCCACGTTCTATTCGTCTTCACATTCTCTCGTTGTTAACAATCGAAGA
GGTTGCGAAGATGATATTTGTTCCACCATTAAGGGATGCGTGGACTCGTATTCCCAATCACACCTTCGAACAGAATGAATTTCATGACAATAATACTGGTATTCCTGATG
CTCCACATTACAAC
Protein sequenceShow/hide protein sequence
RSRRSMRLMRGEERVDRTKQLPRSIRLHILSLLTIEEVAKMIFVPPLRDAWTRIPNHTFEQNEFHDNNTGIPDAPHYN