; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS014097 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014097
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionglucan endo-1,3-beta-glucosidase 3-like
Genome locationscaffold5:552757..553173
RNA-Seq ExpressionMS014097
SyntenyMS014097
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0009506 - plasmodesma (cellular component)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
InterPro domainsIPR012946 - X8 domain
IPR044965 - Glycoside hydrolase family 17, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054595.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Cucumis melo var. makuwa]1.1e-5586.23Show/hide
Query:  QKDITTPITTVPTISIPTMPIVNPTST-PDTVSPAMATPSFGPATT-AGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHAS
        QKDITTPITTVPTI+IPT+PI+NPTS+ PDTVSPAM TPSF PATT  GGSSWCIAS  ASQAALQLALDYACG+GGADC  IQ GG CYNPNSVRDHAS
Subjt:  QKDITTPITTVPTISIPTMPIVNPTST-PDTVSPAMATPSFGPATT-AGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHAS

Query:  YAFNSYYQKNPLPNSCNFGGTAVITSTNPSKFSPFLFF
        YAFN+YYQKNPLPNSCNFGGTAVITSTNPSKFS  LFF
Subjt:  YAFNSYYQKNPLPNSCNFGGTAVITSTNPSKFSPFLFF

XP_011656991.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5 isoform X1 [Cucumis sativus]1.8e-5386.92Show/hide
Query:  QKDITTPITTVPTISIPTMPIVNP-TSTPDTVSPAMATPSFGPATT-AGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHAS
        QKDITTPITTVPTI+IPT+PI+NP +S PDTVSPAM TPSF P+TT +GGSSWCIAS  ASQAALQLALDYACG+GGADC  IQGGG CYNPNSVRDHAS
Subjt:  QKDITTPITTVPTISIPTMPIVNP-TSTPDTVSPAMATPSFGPATT-AGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHAS

Query:  YAFNSYYQKNPLPNSCNFGGTAVITSTNPS
        YAFNSYYQKNPLPNSCNFGGTAVITSTNPS
Subjt:  YAFNSYYQKNPLPNSCNFGGTAVITSTNPS

XP_022149616.1 glucan endo-1,3-beta-glucosidase 3-like [Momordica charantia]4.9e-64100Show/hide
Query:  QKDITTPITTVPTISIPTMPIVNPTSTPDTVSPAMATPSFGPATTAGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASYA
        QKDITTPITTVPTISIPTMPIVNPTSTPDTVSPAMATPSFGPATTAGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASYA
Subjt:  QKDITTPITTVPTISIPTMPIVNPTSTPDTVSPAMATPSFGPATTAGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASYA

Query:  FNSYYQKNPLPNSCNFGGTAVITSTNPS
        FNSYYQKNPLPNSCNFGGTAVITSTNPS
Subjt:  FNSYYQKNPLPNSCNFGGTAVITSTNPS

XP_038900831.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like isoform X1 [Benincasa hispida]1.0e-5386.26Show/hide
Query:  QKDITTPITTVPTISIPTMPIVNPTST-PDTVSPAMATPSFGPATT--AGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHA
        QKDITTPITTVPT++IPTMPI+NPTS+ PDTVSPAM TPSF PATT  +GGSSWCIAS+ ASQAALQLALDYACG+GGADC  IQ GG CYNPNSVRDHA
Subjt:  QKDITTPITTVPTISIPTMPIVNPTST-PDTVSPAMATPSFGPATT--AGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHA

Query:  SYAFNSYYQKNPLPNSCNFGGTAVITSTNPS
        SYAFNSYYQKNPLPNSCNFGGTA+ITSTNPS
Subjt:  SYAFNSYYQKNPLPNSCNFGGTAVITSTNPS

XP_038900832.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like isoform X2 [Benincasa hispida]1.0e-5386.26Show/hide
Query:  QKDITTPITTVPTISIPTMPIVNPTST-PDTVSPAMATPSFGPATT--AGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHA
        QKDITTPITTVPT++IPTMPI+NPTS+ PDTVSPAM TPSF PATT  +GGSSWCIAS+ ASQAALQLALDYACG+GGADC  IQ GG CYNPNSVRDHA
Subjt:  QKDITTPITTVPTISIPTMPIVNPTST-PDTVSPAMATPSFGPATT--AGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHA

Query:  SYAFNSYYQKNPLPNSCNFGGTAVITSTNPS
        SYAFNSYYQKNPLPNSCNFGGTA+ITSTNPS
Subjt:  SYAFNSYYQKNPLPNSCNFGGTAVITSTNPS

TrEMBL top hitse value%identityAlignment
A0A0A0KDA3 X8 domain-containing protein8.5e-5486.92Show/hide
Query:  QKDITTPITTVPTISIPTMPIVNP-TSTPDTVSPAMATPSFGPATT-AGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHAS
        QKDITTPITTVPTI+IPT+PI+NP +S PDTVSPAM TPSF P+TT +GGSSWCIAS  ASQAALQLALDYACG+GGADC  IQGGG CYNPNSVRDHAS
Subjt:  QKDITTPITTVPTISIPTMPIVNP-TSTPDTVSPAMATPSFGPATT-AGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHAS

Query:  YAFNSYYQKNPLPNSCNFGGTAVITSTNPS
        YAFNSYYQKNPLPNSCNFGGTAVITSTNPS
Subjt:  YAFNSYYQKNPLPNSCNFGGTAVITSTNPS

A0A1S4E1R5 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like2.5e-5386.92Show/hide
Query:  QKDITTPITTVPTISIPTMPIVNPTST-PDTVSPAMATPSFGPATT-AGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHAS
        QKDITTPITTVPTI+IPT+PI+NPTS+ PDTVSPAM TPSF PATT  GGSSWCIAS  ASQAALQLALDYACG+GGADC  IQ GG CYNPNSVRDHAS
Subjt:  QKDITTPITTVPTISIPTMPIVNPTST-PDTVSPAMATPSFGPATT-AGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHAS

Query:  YAFNSYYQKNPLPNSCNFGGTAVITSTNPS
        YAFN+YYQKNPLPNSCNFGGTAVITSTNPS
Subjt:  YAFNSYYQKNPLPNSCNFGGTAVITSTNPS

A0A5A7ULQ0 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like5.3e-5686.23Show/hide
Query:  QKDITTPITTVPTISIPTMPIVNPTST-PDTVSPAMATPSFGPATT-AGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHAS
        QKDITTPITTVPTI+IPT+PI+NPTS+ PDTVSPAM TPSF PATT  GGSSWCIAS  ASQAALQLALDYACG+GGADC  IQ GG CYNPNSVRDHAS
Subjt:  QKDITTPITTVPTISIPTMPIVNPTST-PDTVSPAMATPSFGPATT-AGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHAS

Query:  YAFNSYYQKNPLPNSCNFGGTAVITSTNPSKFSPFLFF
        YAFN+YYQKNPLPNSCNFGGTAVITSTNPSKFS  LFF
Subjt:  YAFNSYYQKNPLPNSCNFGGTAVITSTNPSKFSPFLFF

A0A6J1D8X8 glucan endo-1,3-beta-glucosidase 3-like2.4e-64100Show/hide
Query:  QKDITTPITTVPTISIPTMPIVNPTSTPDTVSPAMATPSFGPATTAGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASYA
        QKDITTPITTVPTISIPTMPIVNPTSTPDTVSPAMATPSFGPATTAGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASYA
Subjt:  QKDITTPITTVPTISIPTMPIVNPTSTPDTVSPAMATPSFGPATTAGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASYA

Query:  FNSYYQKNPLPNSCNFGGTAVITSTNPS
        FNSYYQKNPLPNSCNFGGTAVITSTNPS
Subjt:  FNSYYQKNPLPNSCNFGGTAVITSTNPS

A0A6J1JFA6 major pollen allergen Ole e 10-like3.3e-5083.33Show/hide
Query:  QKDITTPITTVPTISIPTMPIVNPTSTPDTVSPAMATPSFGPA-TTAGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASY
        QKDITTPITTVPTI+IPT      TS PD+VSP + TPSF PA TT GGSSWCIA+LGASQAALQLALDYACG+GGADC  IQ GGRCYNPNSVRDHASY
Subjt:  QKDITTPITTVPTISIPTMPIVNPTSTPDTVSPAMATPSFGPA-TTAGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASY

Query:  AFNSYYQKNPLPNSCNFGGTAVITSTNPSKFS
        AFNSYYQKNPLPNSCNFGGTAVITSTNPS  S
Subjt:  AFNSYYQKNPLPNSCNFGGTAVITSTNPSKFS

SwissProt top hitse value%identityAlignment
Q84V39 Major pollen allergen Ole e 105.0e-1945.45Show/hide
Query:  TISIPTMPIVNPT-STPDTVSPAMATPSFGPATTAGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASYAFNSYYQ-KNPL
        T  +P  P+  PT S P + SP    P      T G   WC+    A+ A LQ  +DY C   G DCGPIQ  G C+NPN+VR HASYA NS+YQ K   
Subjt:  TISIPTMPIVNPT-STPDTVSPAMATPSFGPATTAGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASYAFNSYYQ-KNPL

Query:  PNSCNFGGTAVITSTNPSKFS
           C+F GT  ITS++PS  S
Subjt:  PNSCNFGGTAVITSTNPSKFS

Q9FZ86 PLASMODESMATA CALLOSE-BINDING PROTEIN 32.3e-1652.33Show/hide
Query:  AGGSS--WCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASYAFNSYYQKNPLP-NSCNFGGTAVITSTNPS
        AG SS  WC+   G S+A LQ  LDYACG  GADCGPI   G C+NPN+V+ H SYA NS++QK      +C+F GTA  ++++PS
Subjt:  AGGSS--WCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASYAFNSYYQKNPLP-NSCNFGGTAVITSTNPS

Q9M069 Glucan endo-1,3-beta-glucosidase 78.0e-1750Show/hide
Query:  SPAMATPSFGPATTAGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASYAFNSYYQKNP-LPNSCNFGGTAVITSTNPS
        S +  TPS G  T++G   WC+   GA+   LQ +LD+ACG  G DCG IQ GG C+ PN+V  HA+YA N Y+QK+P  P  C+F  TA +TS NPS
Subjt:  SPAMATPSFGPATTAGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASYAFNSYYQKNP-LPNSCNFGGTAVITSTNPS

Q9M2K6 PLASMODESMATA CALLOSE-BINDING PROTEIN 56.1e-1751.25Show/hide
Query:  WCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASYAFNSYYQKN-PLPNSCNFGGTAVITSTNPSK
        WC+A   A  ++LQ A+++ACG GGADCGPIQ GG C +P  V+  AS+ FN+YY KN     +CNF   A +TS NPS+
Subjt:  WCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASYAFNSYYQKN-PLPNSCNFGGTAVITSTNPSK

Q9SD84 PLASMODESMATA CALLOSE-BINDING PROTEIN 21.0e-1651.85Show/hide
Query:  SSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASYAFNSYYQ-KNPLPNSCNFGGTAVITSTNPS
        +SWC+   G S + LQ  LDYACG  GADC P    G C+NP++VR H +YA NS++Q K     SCNF GTA +T+T+PS
Subjt:  SSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASYAFNSYYQ-KNPLPNSCNFGGTAVITSTNPS

Arabidopsis top hitse value%identityAlignment
AT1G09460.1 Carbohydrate-binding X8 domain superfamily protein5.1e-2749.6Show/hide
Query:  ITTPITTVPTISIPTMPIVNPTSTPDTVSPAMATPSFGPATTAGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASYAFNS
        +T P+T   T  +   P   P+ T     P +A P    + +  G SWC+A  GASQ +LQ ALDYACG+  ADC  +Q GG CY+P S++ HAS+AFNS
Subjt:  ITTPITTVPTISIPTMPIVNPTSTPDTVSPAMATPSFGPATTAGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASYAFNS

Query:  YYQKNPLPNSCNFGGTAVITSTNPS
        YYQKNP P SC+FGG A + +TNPS
Subjt:  YYQKNPLPNSCNFGGTAVITSTNPS

AT1G29380.1 Carbohydrate-binding X8 domain superfamily protein2.1e-2863.74Show/hide
Query:  GPATTAGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNPSKFS
        G     G   WCIA   AS  +LQ+ALDYACG GGADCG IQ G  CY PN++RDHAS+AFNSYYQK+P  +SCNFGG A +TST+PSK S
Subjt:  GPATTAGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASYAFNSYYQKNPLPNSCNFGGTAVITSTNPSKFS

AT2G30933.1 Carbohydrate-binding X8 domain superfamily protein4.5e-3155.38Show/hide
Query:  QKDITTPITTVPTISIPTMPIVNPTSTPDTVSPAMATPSFGPATTA--GGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHAS
        +KDITTP+ T PT + PT  + N  S    V+    T    P   A  G  SWC+A    ++ ALQ ALDYACG+GGADC  IQ GG CYNPNS+R HAS
Subjt:  QKDITTPITTVPTISIPTMPIVNPTSTPDTVSPAMATPSFGPATTA--GGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHAS

Query:  YAFNSYYQKNPLPNSCNFGGTAVITSTNPS
        +AFNSYYQKNP+P+SCNF GTA+  S +PS
Subjt:  YAFNSYYQKNPLPNSCNFGGTAVITSTNPS

AT2G30933.2 Carbohydrate-binding X8 domain superfamily protein4.5e-3155.38Show/hide
Query:  QKDITTPITTVPTISIPTMPIVNPTSTPDTVSPAMATPSFGPATTA--GGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHAS
        +KDITTP+ T PT + PT  + N  S    V+    T    P   A  G  SWC+A    ++ ALQ ALDYACG+GGADC  IQ GG CYNPNS+R HAS
Subjt:  QKDITTPITTVPTISIPTMPIVNPTSTPDTVSPAMATPSFGPATTA--GGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHAS

Query:  YAFNSYYQKNPLPNSCNFGGTAVITSTNPS
        +AFNSYYQKNP+P+SCNF GTA+  S +PS
Subjt:  YAFNSYYQKNPLPNSCNFGGTAVITSTNPS

AT5G55180.2 O-Glycosyl hydrolases family 17 protein5.0e-2259.04Show/hide
Query:  GSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASYAFNSYYQKNPL-PNSCNFGGTAVITSTNPSK
        G +WC+A+   ++  LQ  LDYACG GGADC PIQ G  CYNP S+  HASYAFNSYYQKN     +CNFGG A + S  PSK
Subjt:  GSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASYAFNSYYQKNPL-PNSCNFGGTAVITSTNPSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAAAAGGACATCACCACCCCAATCACGACGGTGCCTACAATTAGTATCCCCACCATGCCCATCGTAAACCCTACTTCCACCCCCGACACCGTGTCTCCGGCCATGGCGAC
CCCAAGCTTCGGCCCGGCAACCACCGCCGGCGGCTCCAGCTGGTGCATTGCCAGCCTCGGCGCCTCCCAGGCGGCGCTGCAGCTGGCTCTGGACTATGCCTGCGGCGTGG
GCGGCGCCGATTGCGGGCCGATTCAGGGCGGCGGAAGGTGCTATAACCCTAATTCGGTTCGCGACCATGCTTCTTACGCCTTCAATAGCTATTACCAGAAGAATCCGCTT
CCGAATAGCTGTAATTTTGGAGGGACTGCTGTGATCACCAGCACCAATCCCAGTAAGTTTTCTCCATTTCTTTTTTTTTTTTTCCCT
mRNA sequenceShow/hide mRNA sequence
CAAAAGGACATCACCACCCCAATCACGACGGTGCCTACAATTAGTATCCCCACCATGCCCATCGTAAACCCTACTTCCACCCCCGACACCGTGTCTCCGGCCATGGCGAC
CCCAAGCTTCGGCCCGGCAACCACCGCCGGCGGCTCCAGCTGGTGCATTGCCAGCCTCGGCGCCTCCCAGGCGGCGCTGCAGCTGGCTCTGGACTATGCCTGCGGCGTGG
GCGGCGCCGATTGCGGGCCGATTCAGGGCGGCGGAAGGTGCTATAACCCTAATTCGGTTCGCGACCATGCTTCTTACGCCTTCAATAGCTATTACCAGAAGAATCCGCTT
CCGAATAGCTGTAATTTTGGAGGGACTGCTGTGATCACCAGCACCAATCCCAGTAAGTTTTCTCCATTTCTTTTTTTTTTTTTCCCT
Protein sequenceShow/hide protein sequence
QKDITTPITTVPTISIPTMPIVNPTSTPDTVSPAMATPSFGPATTAGGSSWCIASLGASQAALQLALDYACGVGGADCGPIQGGGRCYNPNSVRDHASYAFNSYYQKNPL
PNSCNFGGTAVITSTNPSKFSPFLFFFFP