; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS014145 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014145
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUPF0678 fatty acid-binding protein-like protein
Genome locationscaffold5:941947..945043
RNA-Seq ExpressionMS014145
SyntenyMS014145
Gene Ontology termsNA
InterPro domainsIPR012674 - Calycin
IPR014878 - THAP4-like, heme-binding beta-barrel domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010458.1 UPF0678 fatty acid-binding protein-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]6.0e-7788.48Show/hide
Query:  MDGELPPASAPSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLV
        MDGELPP  AP SIHPAVAPLSFLLGTWRGKG+GGFPTINSFSYGEE+HFSHSGKKPVISY+QKTWKL S EPMHAESGYWRPKPDGTIEVVIAQSTGLV
Subjt:  MDGELPPASAPSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLV

Query:  EVQKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV
        EVQKGTYNAEE  I LQSE+VGNASKVKEI+R FKLVDG+LSYVVQMATG TSLQ HLKA L+KV
Subjt:  EVQKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV

XP_004139918.1 UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X1 [Cucumis sativus]1.0e-7688.89Show/hide
Query:  MDGELPPASAPS------SIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIA
        MDGELPPASAP+      SIHPAV PLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG KPVISY+QKTWKL S EPMHAESGYWRPKPDGTIEVVIA
Subjt:  MDGELPPASAPS------SIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIA

Query:  QSTGLVEVQKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV
        QSTGLVEVQKGTYNAEE  IKLQSELVGNASKVKEI+RVFKLVDG+LSYVVQMAT  TSLQPHLKALL+KV
Subjt:  QSTGLVEVQKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV

XP_008456272.1 PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X1 [Cucumis melo]1.3e-7689.82Show/hide
Query:  MDGELPPASAPS--SIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTG
        MDGELPPASAP+  SIHPAV PLSFLLGTWRGKG+GGFPTINSFSYGEELHFSHSG KPVISY+QKTWKL S EPMHAESGYWRPKPDGTIEVVIAQSTG
Subjt:  MDGELPPASAPS--SIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTG

Query:  LVEVQKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV
        LVEVQKGT+NAEE  IKLQSELVGNASKVKEI+RVFKLVDG+LSYVVQMAT  TSLQPHLKALL+KV
Subjt:  LVEVQKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV

XP_022149648.1 UPF0678 fatty acid-binding protein-like protein At1g79260 [Momordica charantia]2.1e-8599.39Show/hide
Query:  MDGELPPASAPSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLV
        MDGELPPASAPSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG KPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLV
Subjt:  MDGELPPASAPSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLV

Query:  EVQKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV
        EVQKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV
Subjt:  EVQKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV

XP_038900799.1 UPF0678 fatty acid-binding protein-like protein At1g79260 [Benincasa hispida]1.2e-7790.3Show/hide
Query:  MDGELPPASAPSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLV
        MDGELPPA AP SIHPAV PLSFLLGTWRG+G+GGFPTINSFSYGEELHFSHSG KPVISY+QKTWKL S EPMHAESGYWRPKPDGTIEVVIAQSTGLV
Subjt:  MDGELPPASAPSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLV

Query:  EVQKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV
        EVQKGTYNAEE  IKLQSELVGNASKVKEI+RVFKLVDG+LSY+VQMATG TSLQPHLKALL+KV
Subjt:  EVQKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV

TrEMBL top hitse value%identityAlignment
A0A0A0KAL2 DUF1794 domain-containing protein5.0e-7788.89Show/hide
Query:  MDGELPPASAPS------SIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIA
        MDGELPPASAP+      SIHPAV PLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG KPVISY+QKTWKL S EPMHAESGYWRPKPDGTIEVVIA
Subjt:  MDGELPPASAPS------SIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIA

Query:  QSTGLVEVQKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV
        QSTGLVEVQKGTYNAEE  IKLQSELVGNASKVKEI+RVFKLVDG+LSYVVQMAT  TSLQPHLKALL+KV
Subjt:  QSTGLVEVQKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV

A0A1S3C440 UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X16.5e-7789.82Show/hide
Query:  MDGELPPASAPS--SIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTG
        MDGELPPASAP+  SIHPAV PLSFLLGTWRGKG+GGFPTINSFSYGEELHFSHSG KPVISY+QKTWKL S EPMHAESGYWRPKPDGTIEVVIAQSTG
Subjt:  MDGELPPASAPS--SIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTG

Query:  LVEVQKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV
        LVEVQKGT+NAEE  IKLQSELVGNASKVKEI+RVFKLVDG+LSYVVQMAT  TSLQPHLKALL+KV
Subjt:  LVEVQKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV

A0A6J1D7N5 UPF0678 fatty acid-binding protein-like protein At1g792601.0e-8599.39Show/hide
Query:  MDGELPPASAPSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLV
        MDGELPPASAPSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG KPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLV
Subjt:  MDGELPPASAPSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLV

Query:  EVQKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV
        EVQKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV
Subjt:  EVQKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV

A0A6J1FXD9 UPF0678 fatty acid-binding protein-like protein At1g792602.7e-7587.88Show/hide
Query:  MDGELPPASAPSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLV
        MDGELPP  AP SIHPAVAPLSFLLGTWRGKG+GGFPTINSFSYGEE+HFSHSG KPVISY+QKTWKL S EPMHAESGYWRPKPDGTIEVVIAQSTGLV
Subjt:  MDGELPPASAPSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLV

Query:  EVQKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV
        EVQKGTYNAEE  I LQSE+VGNASKVKEI+R FKLVDG+LSYVVQMATG TSLQ HLKA L+KV
Subjt:  EVQKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV

A0A6J1JFE2 UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X28.5e-7789.09Show/hide
Query:  MDGELPPASAPSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLV
        MDGELPP  AP SIHPAVAPLSFLLGTWRGKG+GGFPTINSFSYGEE+HFSHSG KPVISY+QKTWKL S EPMHAESGYWRPKPDGTIEVVIAQSTGLV
Subjt:  MDGELPPASAPSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLV

Query:  EVQKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV
        EVQKGTYNAEE  I LQSE+VGNASKVKEI+R FKLVDG+LSYVVQMATGSTSLQPHLKA L+KV
Subjt:  EVQKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV

SwissProt top hitse value%identityAlignment
A0PT73 UPF0678 fatty acid-binding protein-like protein MUL_33607.7e-2740.88Show/hide
Query:  PSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAE
        P+ +HP +  L+ LLGTW G+G G +PTI  F Y EE+ FSH G KP + Y QKT  ++ G P+HAE+GY R    G +E+V+A  +G+ E++ GTY+A 
Subjt:  PSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAE

Query:  ENAIKLQ--SELVGNASKVKEIT---RVFKLVDGDLSYVVQMATGSTSLQPHLKALLSK
           I+++  +  +G     KE+T   R F++V  +LSY ++M      LQ HL A L +
Subjt:  ENAIKLQ--SELVGNASKVKEIT---RVFKLVDGDLSYVVQMATGSTSLQPHLKALLSK

A0QIQ0 UPF0678 fatty acid-binding protein-like protein MAV_36111.3e-2641.51Show/hide
Query:  PSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAE
        P+ +HP +A L+ LLGTW G+G G +PTI  F Y EE+ FSH G KP ++Y QKT   + G+P+HAE+GY R    G +E+V+A  +G+ E++ G+Y   
Subjt:  PSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAE

Query:  ENAI--KLQSELVGNASKVKEITRVFK--LVDGD-LSYVVQMATGSTSLQPHLKALLSK
           I  ++ +  +G     KE+T + +   +DGD LSY VQM      LQ HL A+L +
Subjt:  ENAI--KLQSELVGNASKVKEITRVFK--LVDGD-LSYVVQMATGSTSLQPHLKALLSK

B2HLY1 UPF0678 fatty acid-binding protein-like protein MMAR_19955.9e-2740.88Show/hide
Query:  PSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAE
        P+ +HP +  L+ LLGTW G+G G +PTI  F Y EE+ FSH G KP + Y QKT  ++ G P+HAE+GY R    G +E+V+A  +G+ E++ GTY+A 
Subjt:  PSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAE

Query:  ENAIKLQ--SELVGNASKVKEIT---RVFKLVDGDLSYVVQMATGSTSLQPHLKALLSK
           I+++  +  +G     KE+T   R F++V  +LSY ++M      LQ HL A L +
Subjt:  ENAIKLQ--SELVGNASKVKEIT---RVFKLVDGDLSYVVQMATGSTSLQPHLKALLSK

O64527 UPF0678 fatty acid-binding protein-like protein At1g792608.8e-6373.62Show/hide
Query:  GELPPASAPSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEV
        GE PP      +HP VAPLS+LLGTWRG+GEG +PTI SF YGEE+ FSHSG KPVI+YTQKTWKL SG PMHAESGY+RP+PDG+IEVVIAQSTGLVEV
Subjt:  GELPPASAPSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEV

Query:  QKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV
        QKGTYN +E +IKL+S+LVGNASKVKEI+R F+LVDG LSYVV+M+T +  LQPHLKA+L K+
Subjt:  QKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV

Q73W27 UPF0678 fatty acid-binding protein-like protein MAP_2833c4.5e-2740.25Show/hide
Query:  PSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAE
        P+ +HP +A L+ LLGTW G+G G +PTI  F Y EE+ FSH G KP ++Y QKT   + G+P+HAE+GY R    G +E+V+A  +G+ E++ G+Y   
Subjt:  PSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAE

Query:  ENAIKLQSE-----LVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSK
           I+++       L  +A +V  + R F++   +LSY VQM      LQ HL A+L +
Subjt:  ENAIKLQSE-----LVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSK

Arabidopsis top hitse value%identityAlignment
AT1G79260.1 CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1794 (InterPro:IPR014878); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).6.2e-6473.62Show/hide
Query:  GELPPASAPSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEV
        GE PP      +HP VAPLS+LLGTWRG+GEG +PTI SF YGEE+ FSHSG KPVI+YTQKTWKL SG PMHAESGY+RP+PDG+IEVVIAQSTGLVEV
Subjt:  GELPPASAPSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEV

Query:  QKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV
        QKGTYN +E +IKL+S+LVGNASKVKEI+R F+LVDG LSYVV+M+T +  LQPHLKA+L K+
Subjt:  QKGTYNAEENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGAGAACTACCGCCGGCGTCGGCTCCGTCGTCCATTCACCCGGCCGTAGCACCGCTGTCATTCTTACTTGGAACATGGAGAGGCAAAGGCGAAGGCGGATTTCC
CACCATTAATTCCTTCTCCTACGGCGAGGAGCTCCATTTTTCCCATTCCGGCAAGAAGCCAGTGATTTCATATACCCAAAAGACTTGGAAGCTCAGTTCTGGAGAGCCAA
TGCACGCTGAGAGTGGCTATTGGCGTCCCAAGCCCGATGGTACAATTGAGGTAGTCATCGCTCAAAGCACCGGTCTCGTTGAAGTTCAGAAAGGAACATATAATGCAGAA
GAGAATGCGATAAAGCTTCAAAGTGAGCTTGTGGGGAATGCTTCTAAGGTAAAAGAAATAACCAGAGTTTTTAAGCTGGTGGATGGAGATCTTTCCTACGTTGTTCAGAT
GGCTACCGGCTCAACCAGTCTTCAACCACACTTAAAAGCCTTGCTTAGTAAAGTT
mRNA sequenceShow/hide mRNA sequence
ATGGACGGAGAACTACCGCCGGCGTCGGCTCCGTCGTCCATTCACCCGGCCGTAGCACCGCTGTCATTCTTACTTGGAACATGGAGAGGCAAAGGCGAAGGCGGATTTCC
CACCATTAATTCCTTCTCCTACGGCGAGGAGCTCCATTTTTCCCATTCCGGCAAGAAGCCAGTGATTTCATATACCCAAAAGACTTGGAAGCTCAGTTCTGGAGAGCCAA
TGCACGCTGAGAGTGGCTATTGGCGTCCCAAGCCCGATGGTACAATTGAGGTAGTCATCGCTCAAAGCACCGGTCTCGTTGAAGTTCAGAAAGGAACATATAATGCAGAA
GAGAATGCGATAAAGCTTCAAAGTGAGCTTGTGGGGAATGCTTCTAAGGTAAAAGAAATAACCAGAGTTTTTAAGCTGGTGGATGGAGATCTTTCCTACGTTGTTCAGAT
GGCTACCGGCTCAACCAGTCTTCAACCACACTTAAAAGCCTTGCTTAGTAAAGTT
Protein sequenceShow/hide protein sequence
MDGELPPASAPSSIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSGKKPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAE
ENAIKLQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV