; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS014172 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014172
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description6,7-dimethyl-8-ribityllumazine synthase
Genome locationscaffold5:1152848..1153318
RNA-Seq ExpressionMS014172
SyntenyMS014172
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149378.1 uncharacterized protein LOC101207122 [Cucumis sativus]1.4e-6281.53Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS
        MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAG+VL+ANPNHVLSKP SQGVVRRILILSPESELKRGSIYFLIP+TSLP+KKRN A+TLK  
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS

Query:  SRKTKSNTPDAAAAAAAAAVDCDSYLSEIVSDKKSSRRDRRGGRVVVWRPHLESISE
        SRK K+ T     AA     D DSYLS++VSDKK SRR+RRG RV+VWRPHLESISE
Subjt:  SRKTKSNTPDAAAAAAAAAVDCDSYLSEIVSDKKSSRRDRRGGRVVVWRPHLESISE

XP_022947823.1 uncharacterized protein LOC111451584 [Cucurbita moschata]1.2e-6182.28Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS
        MGNSLRCCLACVLPCGALDLIRIVHL+GHVEEIAHPITAGEVL+ANPNHVLSKP SQGVVRRILILSPESELKRGSIYFLIPATSLP+KK+N  +T K S
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS

Query:  SRKTKSNTPDAAAAAAAAAVDCDSYLSEIVSDKKSSRRDRR-GGRVVVWRPHLESISE
        S+KTK++T       AA  VD  SYLS+IVSDKK SRRDRR G RVVVWRPHLESISE
Subjt:  SRKTKSNTPDAAAAAAAAAVDCDSYLSEIVSDKKSSRRDRR-GGRVVVWRPHLESISE

XP_023007260.1 uncharacterized protein LOC111499799 [Cucurbita maxima]5.2e-6282.28Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS
        MGNSLRCCLACVLPCGALDLIRIVHL+GHVEEIAHPITAGEVL+ANPNHVLSKP SQGVVRRILILSPESELKRGSIYFLIPATSLP+KK+N  +T K S
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS

Query:  SRKTKSNTPDAAAAAAAAAVDCDSYLSEIVSDKKSSRRDRRGG-RVVVWRPHLESISE
        S+KTK++T       AA  +D  SYLS+IVSDKK SRRDRRGG RVVVWRPHLESISE
Subjt:  SRKTKSNTPDAAAAAAAAAVDCDSYLSEIVSDKKSSRRDRRGG-RVVVWRPHLESISE

XP_023534513.1 uncharacterized protein LOC111796057 [Cucurbita pepo subsp. pepo]3.0e-6282.91Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS
        MGNSLRCCLACVLPCGALDLIRIVHL+GHVEEIAHPITAGEVL+ANPNHVLSKP SQGVVRRILILSPESELKRGSIYFLIPATSLP+KK+N  +T K S
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS

Query:  SRKTKSNTPDAAAAAAAAAVDCDSYLSEIVSDKKSSRRDRRGG-RVVVWRPHLESISE
        S+KTK++T       AA  VD  SYLS+IVSDKK SRRDRRGG RVVVWRPHLESISE
Subjt:  SRKTKSNTPDAAAAAAAAAVDCDSYLSEIVSDKKSSRRDRRGG-RVVVWRPHLESISE

XP_038902054.1 uncharacterized protein LOC120088703 [Benincasa hispida]2.8e-6383.44Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS
        MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAG+VL+ANPNHVLSKP SQGVVRRILILSPESELKRGSIYFLIPATSLP+KKRN  +TLK  
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS

Query:  SRKTKSNTPDAAAAAAAAAVDCDSYLSEIVSDKKSSRRDRRGGRVVVWRPHLESISE
        SRK K  T     AA +AA D DSYLS++VSDKK SRR+RRG RVVVWRPHLESISE
Subjt:  SRKTKSNTPDAAAAAAAAAVDCDSYLSEIVSDKKSSRRDRRGGRVVVWRPHLESISE

TrEMBL top hitse value%identityAlignment
A0A0A0KBY5 Uncharacterized protein6.6e-6381.53Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS
        MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAG+VL+ANPNHVLSKP SQGVVRRILILSPESELKRGSIYFLIP+TSLP+KKRN A+TLK  
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS

Query:  SRKTKSNTPDAAAAAAAAAVDCDSYLSEIVSDKKSSRRDRRGGRVVVWRPHLESISE
        SRK K+ T     AA     D DSYLS++VSDKK SRR+RRG RV+VWRPHLESISE
Subjt:  SRKTKSNTPDAAAAAAAAAVDCDSYLSEIVSDKKSSRRDRRGGRVVVWRPHLESISE

A0A1S3CK32 uncharacterized protein LOC1035018741.6e-6181.01Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS
        MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEI HPITAG+VL+ANPNHVLSKP SQGVVRRILILSPESELKRGSIYFLIP+TSLP+KKRN  +TLK  
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS

Query:  SRKTKSNTPDAAAAAAAAAVDCDSYLSEIVSDKKSSRRDRR-GGRVVVWRPHLESISE
        SRK K+ T    AA   AA D DSYLS++VSDKK SRR+RR G RV+VWRPHLESISE
Subjt:  SRKTKSNTPDAAAAAAAAAVDCDSYLSEIVSDKKSSRRDRR-GGRVVVWRPHLESISE

A0A5A7UMR0 6,7-dimethyl-8-ribityllumazine synthase1.6e-6181.01Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS
        MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEI HPITAG+VL+ANPNHVLSKP SQGVVRRILILSPESELKRGSIYFLIP+TSLP+KKRN  +TLK  
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS

Query:  SRKTKSNTPDAAAAAAAAAVDCDSYLSEIVSDKKSSRRDRR-GGRVVVWRPHLESISE
        SRK K+ T    AA   AA D DSYLS++VSDKK SRR+RR G RV+VWRPHLESISE
Subjt:  SRKTKSNTPDAAAAAAAAAVDCDSYLSEIVSDKKSSRRDRR-GGRVVVWRPHLESISE

A0A6J1G7P3 uncharacterized protein LOC1114515845.6e-6282.28Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS
        MGNSLRCCLACVLPCGALDLIRIVHL+GHVEEIAHPITAGEVL+ANPNHVLSKP SQGVVRRILILSPESELKRGSIYFLIPATSLP+KK+N  +T K S
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS

Query:  SRKTKSNTPDAAAAAAAAAVDCDSYLSEIVSDKKSSRRDRR-GGRVVVWRPHLESISE
        S+KTK++T       AA  VD  SYLS+IVSDKK SRRDRR G RVVVWRPHLESISE
Subjt:  SRKTKSNTPDAAAAAAAAAVDCDSYLSEIVSDKKSSRRDRR-GGRVVVWRPHLESISE

A0A6J1L2H4 uncharacterized protein LOC1114997992.5e-6282.28Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS
        MGNSLRCCLACVLPCGALDLIRIVHL+GHVEEIAHPITAGEVL+ANPNHVLSKP SQGVVRRILILSPESELKRGSIYFLIPATSLP+KK+N  +T K S
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS

Query:  SRKTKSNTPDAAAAAAAAAVDCDSYLSEIVSDKKSSRRDRRGG-RVVVWRPHLESISE
        S+KTK++T       AA  +D  SYLS+IVSDKK SRRDRRGG RVVVWRPHLESISE
Subjt:  SRKTKSNTPDAAAAAAAAAVDCDSYLSEIVSDKKSSRRDRRGG-RVVVWRPHLESISE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06980.1 unknown protein3.2e-4963.31Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS
        MGNSLRCCLACVLPCGALDLIRIVHLNG+VEEI   ITAGE+L+ANPNHVLSKPCSQGVVR+ILILSPESELKRGSIYFLIP +SLP+KKR    T +  
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS

Query:  SRKTKSNTPDAAAAAAAAAVD------CDSYLSEIVS------DKKSSRRDRRGGRVVVWRPHLESISE
         RK     P A AA      D      C+ YL E+VS      + +  RR  R   V  WRP L+SISE
Subjt:  SRKTKSNTPDAAAAAAAAAVD------CDSYLSEIVS------DKKSSRRDRRGGRVVVWRPHLESISE

AT1G29195.1 unknown protein3.7e-3444.68Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCS-------QGVV--RRILILSPESELKRGSIYFLIPAT-------
        M  ++RCC+AC+LPCGALD+IRIVH NGHVEEI+  ITA E+++A+P HVL KP S       + V+   +I+I+ PE+EL+RG IYFL+PAT       
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCS-------QGVV--RRILILSPESELKRGSIYFLIPAT-------

Query:  --SLPDKKRNTASTLKKSSRKTK-------------SNTPDAAAAAAAAAVDCDSYLSEIVSDKKSSRRDRRGGRVVVWRPHLESISE
           +  +K N  + +KK S+  +             SN            +  D YL+EI+S+K ++++DRR GRV VWRPHLESISE
Subjt:  --SLPDKKRNTASTLKKSSRKTK-------------SNTPDAAAAAAAAAVDCDSYLSEIVSDKKSSRRDRRGGRVVVWRPHLESISE

AT2G30230.1 unknown protein2.3e-4758.05Show/hide
Query:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS
        MGNSLRCCLACVLPCGALDLIRIVHLNGHV+EI  P+TAGE+L+ANPNHVLSKPCSQGVVR+ILILSPESELKRGSIYFLIP TS+P+KK+       + 
Subjt:  MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKS

Query:  SRKTKSNTPDAAAAAAAAAVD--------CDSYLSEI-VSDKKSS--------RRDRRGGRVVVWRPHLESISE
         +K   +  D  +   +   D        C+ YL ++ +S+K SS        R+  R   V  WRPHL+SI+E
Subjt:  SRKTKSNTPDAAAAAAAAAVD--------CDSYLSEI-VSDKKSS--------RRDRRGGRVVVWRPHLESISE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAACAGTTTAAGGTGTTGTTTGGCGTGTGTTCTTCCCTGTGGAGCTCTGGATTTGATCCGGATCGTCCATTTGAACGGCCACGTGGAAGAAATCGCCCATCCGAT
CACCGCCGGCGAAGTCCTCGAAGCAAACCCAAATCACGTTCTGAGTAAGCCTTGCTCCCAAGGGGTCGTTCGCCGGATTCTGATTCTCTCGCCGGAATCGGAGCTCAAAA
GGGGCAGCATTTATTTCTTGATTCCGGCCACCTCTCTGCCGGACAAAAAAAGAAACACTGCCAGCACCCTAAAGAAATCCTCTAGAAAAACCAAGAGCAACACCCCCGAC
GCCGCCGCCGCCGCCGCCGCCGCCGCCGTAGACTGTGATTCTTACCTCTCGGAGATTGTCTCCGACAAGAAATCTTCTCGGCGGGACCGCCGCGGCGGCCGCGTCGTCGT
ATGGCGCCCCCATTTAGAGAGCATCTCCGAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTAACAGTTTAAGGTGTTGTTTGGCGTGTGTTCTTCCCTGTGGAGCTCTGGATTTGATCCGGATCGTCCATTTGAACGGCCACGTGGAAGAAATCGCCCATCCGAT
CACCGCCGGCGAAGTCCTCGAAGCAAACCCAAATCACGTTCTGAGTAAGCCTTGCTCCCAAGGGGTCGTTCGCCGGATTCTGATTCTCTCGCCGGAATCGGAGCTCAAAA
GGGGCAGCATTTATTTCTTGATTCCGGCCACCTCTCTGCCGGACAAAAAAAGAAACACTGCCAGCACCCTAAAGAAATCCTCTAGAAAAACCAAGAGCAACACCCCCGAC
GCCGCCGCCGCCGCCGCCGCCGCCGCCGTAGACTGTGATTCTTACCTCTCGGAGATTGTCTCCGACAAGAAATCTTCTCGGCGGGACCGCCGCGGCGGCCGCGTCGTCGT
ATGGCGCCCCCATTTAGAGAGCATCTCCGAG
Protein sequenceShow/hide protein sequence
MGNSLRCCLACVLPCGALDLIRIVHLNGHVEEIAHPITAGEVLEANPNHVLSKPCSQGVVRRILILSPESELKRGSIYFLIPATSLPDKKRNTASTLKKSSRKTKSNTPD
AAAAAAAAAVDCDSYLSEIVSDKKSSRRDRRGGRVVVWRPHLESISE