; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS014198 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014198
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionselT-like protein
Genome locationscaffold5:1349739..1350080
RNA-Seq ExpressionMS014198
SyntenyMS014198
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR019389 - Selenoprotein T


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG9453466.1 hypothetical protein H6P81_006370 [Aristolochia fimbriata]4.4e-1845.61Show/hide
Query:  SCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPP-WYHRLAAHKFFVIAIPWLLGSIAINYLQNT
        SC  RGT++++K ++  +FPGI+V LS+HPP L K L  K I   QV ++ I+MAG  I   +    PP WY+ L A++F  IA  WL G++  N+LQ++
Subjt:  SCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPP-WYHRLAAHKFFVIAIPWLLGSIAINYLQNT

Query:  EPFEVYFNDELVLN
          FEVY NDELV +
Subjt:  EPFEVYFNDELVLN

PKA63308.1 SelT-like protein [Apostasia shenzhenica]1.0e-1945.61Show/hide
Query:  ISCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPPWYHRLAAHKFFVIAIPWLLGSIAINYLQNT
        +SC  RG+++++K ++  +FPGI VTLS++PP L K L +K +  AQV  I+I+ AG +I  ++ M  PPWY+ L A++F  IA  WLLG+   + LQ++
Subjt:  ISCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPPWYHRLAAHKFFVIAIPWLLGSIAINYLQNT

Query:  EPFEVYFNDELVLN
          FEVYFN ELV +
Subjt:  EPFEVYFNDELVLN

XP_020252680.1 LOW QUALITY PROTEIN: selT-like protein [Asparagus officinalis]2.6e-1844.25Show/hide
Query:  SCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPPWYHRLAAHKFFVIAIPWLLGSIAINYLQNTE
        SC  +GT++++K ++  +FPGI+V LS++PP L K L  K +  AQ  +I I+M G +I   + MP P WYH L A++F  +A  WLLG+ A ++LQ++ 
Subjt:  SCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPPWYHRLAAHKFFVIAIPWLLGSIAINYLQNTE

Query:  PFEVYFNDELVLN
         FEVY N ELV +
Subjt:  PFEVYFNDELVLN

XP_020593214.1 selT-like protein [Phalaenopsis equestris]4.4e-1843.86Show/hide
Query:  ISCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPPWYHRLAAHKFFVIAIPWLLGSIAINYLQNT
        +SC  RGT++++K ++  +FPGI V LS++PP L K + +K +  AQV +I I++AG +I   + M  PPWY+ L A++F  IA  WLLG+   + LQ++
Subjt:  ISCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPPWYHRLAAHKFFVIAIPWLLGSIAINYLQNT

Query:  EPFEVYFNDELVLN
          FEVY N ELV +
Subjt:  EPFEVYFNDELVLN

XP_022148433.1 selT-like protein [Momordica charantia]6.5e-5498.18Show/hide
Query:  CFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPPWYHRLAAHKFFVIAIPWLLGSIAINYLQNTEP
        C  RGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPPWYHRLAAHKFFVIAIPWLLGSIAINYLQNTEP
Subjt:  CFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPPWYHRLAAHKFFVIAIPWLLGSIAINYLQNTEP

Query:  FEVYFNDELV
        FEVYFNDELV
Subjt:  FEVYFNDELV

TrEMBL top hitse value%identityAlignment
A0A2I0B679 SelT-like protein5.0e-2045.61Show/hide
Query:  ISCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPPWYHRLAAHKFFVIAIPWLLGSIAINYLQNT
        +SC  RG+++++K ++  +FPGI VTLS++PP L K L +K +  AQV  I+I+ AG +I  ++ M  PPWY+ L A++F  IA  WLLG+   + LQ++
Subjt:  ISCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPPWYHRLAAHKFFVIAIPWLLGSIAINYLQNT

Query:  EPFEVYFNDELVLN
          FEVYFN ELV +
Subjt:  EPFEVYFNDELVLN

A0A314XXS3 SelT-like protein6.2e-1846.43Show/hide
Query:  FGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMR-MPIPPWYHRLAAHKFFVIAIPWLLGSIAINYLQNTEP
        FGRG +++I  ++  +FPGI+V L +HPP L K + +K +  AQV +  IVMAG  I   +  M  PPWYH L A++F  IA  WLLG+   ++LQ T  
Subjt:  FGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMR-MPIPPWYHRLAAHKFFVIAIPWLLGSIAINYLQNTEP

Query:  FEVYFNDELVLN
        FEV+ NDELV +
Subjt:  FEVYFNDELVLN

A0A5B7BDY4 Putative selT-like protein (Fragment)6.2e-1844.74Show/hide
Query:  SCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMR-MPIPPWYHRLAAHKFFVIAIPWLLGSIAINYLQNT
        SC  RGT++++K ++  +FPG++V L+++PP L K L +K +   Q+ II IVMAG  I   +  +  PPWY+ L A++F  IA  WLLG++  ++LQN+
Subjt:  SCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMR-MPIPPWYHRLAAHKFFVIAIPWLLGSIAINYLQNT

Query:  EPFEVYFNDELVLN
          FEVY+NDELV +
Subjt:  EPFEVYFNDELVLN

A0A6J1D431 selT-like protein3.1e-5498.18Show/hide
Query:  CFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPPWYHRLAAHKFFVIAIPWLLGSIAINYLQNTEP
        C  RGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPPWYHRLAAHKFFVIAIPWLLGSIAINYLQNTEP
Subjt:  CFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPPWYHRLAAHKFFVIAIPWLLGSIAINYLQNTEP

Query:  FEVYFNDELV
        FEVYFNDELV
Subjt:  FEVYFNDELV

M5WCM6 Uncharacterized protein1.4e-1744.74Show/hide
Query:  SCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMR-MPIPPWYHRLAAHKFFVIAIPWLLGSIAINYLQNT
        SC  +G +++I  ++  +FPGI+V LS+HPP L K + +K +  AQV +  IVMAG +I   +  M  PPWY+ L A++F  IA  WLLG+   ++LQ T
Subjt:  SCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMR-MPIPPWYHRLAAHKFFVIAIPWLLGSIAINYLQNT

Query:  EPFEVYFNDELVLN
          FEV+ NDELV +
Subjt:  EPFEVYFNDELVLN

SwissProt top hitse value%identityAlignment
Q9STZ2 SelT-like protein2.1e-1538.26Show/hide
Query:  ISCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPP-WYHRLAAHKFFVIAIPWLLGSIAINYLQN
        ISC  +GT++S+K ++   FPG++V L+++P    K +  K +  AQV +I ++M G  I   + +  PP WYH L A++F  +A  WLLG+   ++LQ+
Subjt:  ISCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPP-WYHRLAAHKFFVIAIPWLLGSIAINYLQN

Query:  TEPFEVYFNDELVLN
        +  FEV  N ELV +
Subjt:  TEPFEVYFNDELVLN

Arabidopsis top hitse value%identityAlignment
AT3G47300.1 SELT-like protein precursor1.5e-1638.26Show/hide
Query:  ISCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPP-WYHRLAAHKFFVIAIPWLLGSIAINYLQN
        ISC  +GT++S+K ++   FPG++V L+++P    K +  K +  AQV +I ++M G  I   + +  PP WYH L A++F  +A  WLLG+   ++LQ+
Subjt:  ISCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPP-WYHRLAAHKFFVIAIPWLLGSIAINYLQN

Query:  TEPFEVYFNDELVLN
        +  FEV  N ELV +
Subjt:  TEPFEVYFNDELVLN

AT5G58640.1 Selenoprotein, Rdx type4.4e-1635.65Show/hide
Query:  ISCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPP-WYHRLAAHKFFVIAIPWLLGSIAINYLQN
        +SC  +GT++++K ++   FPG++V L+++PP   K L  K +   Q+ +I +++AG  IL  + +  PP W+H L A++F  +A  WL+G+   +YLQ+
Subjt:  ISCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPP-WYHRLAAHKFFVIAIPWLLGSIAINYLQN

Query:  TEPFEVYFNDELVLN
        +  FEV+ N E V +
Subjt:  TEPFEVYFNDELVLN

AT5G58640.2 Selenoprotein, Rdx type4.4e-1635.65Show/hide
Query:  ISCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPP-WYHRLAAHKFFVIAIPWLLGSIAINYLQN
        +SC  +GT++++K ++   FPG++V L+++PP   K L  K +   Q+ +I +++AG  IL  + +  PP W+H L A++F  +A  WL+G+   +YLQ+
Subjt:  ISCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPP-WYHRLAAHKFFVIAIPWLLGSIAINYLQN

Query:  TEPFEVYFNDELVLN
        +  FEV+ N E V +
Subjt:  TEPFEVYFNDELVLN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATATCATGTTTTGGCAGAGGAACTTCCATGTCGATTAAGCTGCTGGTGCTTGAAAACTTTCCTGGAATCAATGTTACTCTTTCACATCATCCTCCAGATTTGACAAAATA
TCTTACGACAAAATTTATATCAACTGCACAAGTACTGATTATTATCATAGTGATGGCTGGTGGATATATTCTTGCCGAGATGAGAATGCCAATACCTCCTTGGTACCATC
GTTTGGCCGCACACAAATTTTTTGTCATCGCAATCCCTTGGCTTCTGGGCAGCATAGCTATAAACTACCTCCAAAACACTGAGCCCTTTGAAGTTTACTTCAATGATGAA
CTGGTACTGAAC
mRNA sequenceShow/hide mRNA sequence
ATATCATGTTTTGGCAGAGGAACTTCCATGTCGATTAAGCTGCTGGTGCTTGAAAACTTTCCTGGAATCAATGTTACTCTTTCACATCATCCTCCAGATTTGACAAAATA
TCTTACGACAAAATTTATATCAACTGCACAAGTACTGATTATTATCATAGTGATGGCTGGTGGATATATTCTTGCCGAGATGAGAATGCCAATACCTCCTTGGTACCATC
GTTTGGCCGCACACAAATTTTTTGTCATCGCAATCCCTTGGCTTCTGGGCAGCATAGCTATAAACTACCTCCAAAACACTGAGCCCTTTGAAGTTTACTTCAATGATGAA
CTGGTACTGAAC
Protein sequenceShow/hide protein sequence
ISCFGRGTSMSIKLLVLENFPGINVTLSHHPPDLTKYLTTKFISTAQVLIIIIVMAGGYILAEMRMPIPPWYHRLAAHKFFVIAIPWLLGSIAINYLQNTEPFEVYFNDE
LVLN