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MS014199 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014199
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionselT-like protein
Genome locationscaffold5:1350659..1350958
RNA-Seq ExpressionMS014199
SyntenyMS014199
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148433.1 selT-like protein [Momordica charantia]1.5e-4699Show/hide
Query:  MDRRVLLLTLLPLSVFCFDIYGFFSTPPPKSSNSLVFHHPHGANLNQTFTAKLNQTLTANLNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR
        MDRRVLLLTLLPLSVFCFDIY FFSTPPPKSSNSLVFHHPHGANLNQTFTAKLNQTLTANLNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR
Subjt:  MDRRVLLLTLLPLSVFCFDIYGFFSTPPPKSSNSLVFHHPHGANLNQTFTAKLNQTLTANLNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR
TrEMBL top hitse value%identityAlignment
A0A200PWW3 Selenoprotein5.8e-0440Show/hide
Query:  MDRRVLLLTLLPLSVFCFDIYGFFSTPPPKSSNSLVFHHPHGANLNQTFTAKLNQTLTANLNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR
        MDR  +LL  LPL +FC D+  FF+ PPPKSS     HH H  N +Q     + QTL          DL     G+         G TI I F S CSYR
Subjt:  MDRRVLLLTLLPLSVFCFDIYGFFSTPPPKSSNSLVFHHPHGANLNQTFTAKLNQTLTANLNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR
A0A6J1D431 selT-like protein7.2e-4799Show/hide
Query:  MDRRVLLLTLLPLSVFCFDIYGFFSTPPPKSSNSLVFHHPHGANLNQTFTAKLNQTLTANLNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR
        MDRRVLLLTLLPLSVFCFDIY FFSTPPPKSSNSLVFHHPHGANLNQTFTAKLNQTLTANLNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR
Subjt:  MDRRVLLLTLLPLSVFCFDIYGFFSTPPPKSSNSLVFHHPHGANLNQTFTAKLNQTLTANLNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGAAGAGTGTTGCTTCTGACATTGCTGCCGCTCTCTGTCTTCTGCTTCGACATCTACGGTTTCTTCTCTACTCCGCCTCCGAAATCATCCAATTCTCTCGTCTT
TCATCATCCACACGGAGCCAATTTGAATCAGACATTTACAGCCAAATTGAACCAAACGCTTACAGCCAATTTGAATCGAACACTTGGAGCCGATTTGAACCGGACACAAT
CGGGGAGTTCGAATCAGACGCAAACAGCCAACGTAGGCGATACGATTCTCATCAAATTCAGCTCTCTGTGCTCTTACAGG
mRNA sequenceShow/hide mRNA sequence
ATGGATCGAAGAGTGTTGCTTCTGACATTGCTGCCGCTCTCTGTCTTCTGCTTCGACATCTACGGTTTCTTCTCTACTCCGCCTCCGAAATCATCCAATTCTCTCGTCTT
TCATCATCCACACGGAGCCAATTTGAATCAGACATTTACAGCCAAATTGAACCAAACGCTTACAGCCAATTTGAATCGAACACTTGGAGCCGATTTGAACCGGACACAAT
CGGGGAGTTCGAATCAGACGCAAACAGCCAACGTAGGCGATACGATTCTCATCAAATTCAGCTCTCTGTGCTCTTACAGG
Protein sequenceShow/hide protein sequence
MDRRVLLLTLLPLSVFCFDIYGFFSTPPPKSSNSLVFHHPHGANLNQTFTAKLNQTLTANLNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR