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MS014214 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014214
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionsister chromatid cohesion protein PDS5 homolog A
Genome locationscaffold5:1442807..1442938
RNA-Seq ExpressionMS014214
SyntenyMS014214
Gene Ontology termsGO:0007064 - mitotic sister chromatid cohesion (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022131945.1 sister chromatid cohesion protein PDS5 homolog A-B isoform X4 [Momordica charantia]1.7e-0775.68Show/hide
Query:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
        KLLEVY DYCDKC +GQL +ND F QI CKVLMLCY+
Subjt:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
XP_022941045.1 sister chromatid cohesion protein PDS5 homolog A [Cucurbita moschata]2.1e-0881.08Show/hide
Query:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
        KLLEVY DYCDKC +GQLTMND F QI CKVLMLCY+
Subjt:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
XP_022980925.1 sister chromatid cohesion protein PDS5 homolog A-like [Cucurbita maxima]2.1e-0881.08Show/hide
Query:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
        KLLEVY DYCDKC +GQLTMND F QI CKVLMLCY+
Subjt:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
XP_023523390.1 sister chromatid cohesion protein PDS5 homolog A-like isoform X1 [Cucurbita pepo subsp. pepo]6.0e-0878.38Show/hide
Query:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
        +LLEVY DYCDKC +GQLTMND F QI CKVLMLCY+
Subjt:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
XP_023523391.1 sister chromatid cohesion protein PDS5 homolog A-like isoform X2 [Cucurbita pepo subsp. pepo]6.0e-0878.38Show/hide
Query:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
        +LLEVY DYCDKC +GQLTMND F QI CKVLMLCY+
Subjt:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
TrEMBL top hitse value%identityAlignment
A0A6J1BR35 sister chromatid cohesion protein PDS5 homolog A-B isoform X48.5e-0875.68Show/hide
Query:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
        KLLEVY DYCDKC +GQL +ND F QI CKVLMLCY+
Subjt:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
A0A6J1BRL6 sister chromatid cohesion protein PDS5 homolog A isoform X28.5e-0875.68Show/hide
Query:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
        KLLEVY DYCDKC +GQL +ND F QI CKVLMLCY+
Subjt:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
A0A6J1BUT7 sister chromatid cohesion protein PDS5 homolog A isoform X18.5e-0875.68Show/hide
Query:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
        KLLEVY DYCDKC +GQL +ND F QI CKVLMLCY+
Subjt:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
A0A6J1FSF4 sister chromatid cohesion protein PDS5 homolog A1.0e-0881.08Show/hide
Query:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
        KLLEVY DYCDKC +GQLTMND F QI CKVLMLCY+
Subjt:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
A0A6J1IXY6 sister chromatid cohesion protein PDS5 homolog A-like1.0e-0881.08Show/hide
Query:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
        KLLEVY DYCDKC +GQLTMND F QI CKVLMLCY+
Subjt:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G77600.1 ARM repeat superfamily protein2.6e-0964.86Show/hide
Query:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
        KL EVY DYCDKC EG +T+ D F QI CK+L+LC E
Subjt:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
AT1G77600.2 ARM repeat superfamily protein2.6e-0964.86Show/hide
Query:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
        KL EVY DYCDKC EG +T+ D F QI CK+L+LC E
Subjt:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
AT1G77600.3 ARM repeat superfamily protein2.6e-0964.86Show/hide
Query:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE
        KL EVY DYCDKC EG +T+ D F QI CK+L+LC E
Subjt:  KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAATTGTTGGAAGTATATGGAGATTATTGTGATAAATGTTTCGAAGGCCAATTGACTATGAACGATTACTTTGGACAAATCTCATGTAAAGTTTTGATGCTTTGCTATGA
GTTTAAAATCTGTTATAACTTT
mRNA sequenceShow/hide mRNA sequence
AAATTGTTGGAAGTATATGGAGATTATTGTGATAAATGTTTCGAAGGCCAATTGACTATGAACGATTACTTTGGACAAATCTCATGTAAAGTTTTGATGCTTTGCTATGA
GTTTAAAATCTGTTATAACTTT
Protein sequenceShow/hide protein sequence
KLLEVYGDYCDKCFEGQLTMNDYFGQISCKVLMLCYEFKICYNF