CuGenDBv2

Gene ID	MS014218
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Thylakoid soluble phosphoprotein TSP
Genome location	scaffold5:1461586..1461879
RNA-Seq Expression	MS014218
Synteny	MS014218
Gene Ontology terms	NA
InterPro domains	IPR021584 - Thylakoid soluble phosphoprotein TSP9 IPR037244 - Thylakoid soluble phosphoprotein TSP9 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7010512.1 hypothetical protein SDJN02_27306, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-30

79.8

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Query:  MAALPIAFSPAAGRVFAATAAKGAGESKKEKGLFDWILGGLEKDQLLETDPILQKVEGK-NNGGAGAGAADAARGRKNSVQVPPKKNGGGFGGLFAKKD
        MA+LPIAFSPAAGRVFAATAAKGAGESKKEKGL DWI+G LE+DQLLETDP+LQKVEGK +N G  +G      GRKNSVQVPPKKN GGFGGLFAK+D
Subjt:  MAALPIAFSPAAGRVFAATAAKGAGESKKEKGLFDWILGGLEKDQLLETDPILQKVEGK-NNGGAGAGAADAARGRKNSVQVPPKKNGGGFGGLFAKKD

XP_004143212.1 uncharacterized protein LOC101205268 [Cucumis sativus]

1.4e-33

81.63

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Query:  MAALPIAFSPAAGRVFAATAAKGAGESKKEKGLFDWILGGLEKDQLLETDPILQKVEGKNNGGAGAGAADAARGRKNSVQVPPKKNGGGFGGLFAKKD
        MA+LPIAFSPAAGRVFAATAAKGAGESKKEKGL DWI+G L KDQLLETDP+LQKVEGK +  +G G      GRKNSVQVPPKKNGGGFGGLFAKKD
Subjt:  MAALPIAFSPAAGRVFAATAAKGAGESKKEKGLFDWILGGLEKDQLLETDPILQKVEGKNNGGAGAGAADAARGRKNSVQVPPKKNGGGFGGLFAKKD

XP_008464052.1 PREDICTED: uncharacterized protein LOC103502033 [Cucumis melo]

1.2e-32

79.59

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Query:  MAALPIAFSPAAGRVFAATAAKGAGESKKEKGLFDWILGGLEKDQLLETDPILQKVEGKNNGGAGAGAADAARGRKNSVQVPPKKNGGGFGGLFAKKD
        MA+LPIAFSPAAGRVFAATAAKGAGESKKEKGL DWI+G L KDQLLETDP+LQKVEGK+  G         RGRKNSVQ+PPKKNGG FGGLFAKKD
Subjt:  MAALPIAFSPAAGRVFAATAAKGAGESKKEKGLFDWILGGLEKDQLLETDPILQKVEGKNNGGAGAGAADAARGRKNSVQVPPKKNGGGFGGLFAKKD

XP_023532336.1 uncharacterized protein LOC111794525 [Cucurbita pepo subsp. pepo]

1.9e-30

78.57

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Query:  MAALPIAFSPAAGRVFAATAAKGAGESKKEKGLFDWILGGLEKDQLLETDPILQKVEGKNNGGAGAGAADAARGRKNSVQVPPKKNGGGFGGLFAKKD
        MA+L  AFSPAAGRVFAATAAKGAGESKKEKG+ DWILGG+EKDQLLETDP+LQKVEGKN G    G      G+KNSVQVPPKKN G FGGLFAKKD
Subjt:  MAALPIAFSPAAGRVFAATAAKGAGESKKEKGLFDWILGGLEKDQLLETDPILQKVEGKNNGGAGAGAADAARGRKNSVQVPPKKNGGGFGGLFAKKD

XP_038901860.1 uncharacterized protein LOC120088545 [Benincasa hispida]

2.7e-32

80.61

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Query:  MAALPIAFSPAAGRVFAATAAKGAGESKKEKGLFDWILGGLEKDQLLETDPILQKVEGKNNGGAGAGAADAARGRKNSVQVPPKKNGGGFGGLFAKKD
        MA+LPIAFSPAA RVFAATAAKGAGESKKE+GL DWI+G L KDQLLETDP+LQKVEGK    AG G+     GRKNSVQVPPKKNGGGFGGLFAKKD
Subjt:  MAALPIAFSPAAGRVFAATAAKGAGESKKEKGLFDWILGGLEKDQLLETDPILQKVEGKNNGGAGAGAADAARGRKNSVQVPPKKNGGGFGGLFAKKD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KC59 Uncharacterized protein

6.9e-34

81.63

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Query:  MAALPIAFSPAAGRVFAATAAKGAGESKKEKGLFDWILGGLEKDQLLETDPILQKVEGKNNGGAGAGAADAARGRKNSVQVPPKKNGGGFGGLFAKKD
        MA+LPIAFSPAAGRVFAATAAKGAGESKKEKGL DWI+G L KDQLLETDP+LQKVEGK +  +G G      GRKNSVQVPPKKNGGGFGGLFAKKD
Subjt:  MAALPIAFSPAAGRVFAATAAKGAGESKKEKGLFDWILGGLEKDQLLETDPILQKVEGKNNGGAGAGAADAARGRKNSVQVPPKKNGGGFGGLFAKKD

A0A1S3CKK5 uncharacterized protein LOC103502033

5.8e-33

79.59

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Query:  MAALPIAFSPAAGRVFAATAAKGAGESKKEKGLFDWILGGLEKDQLLETDPILQKVEGKNNGGAGAGAADAARGRKNSVQVPPKKNGGGFGGLFAKKD
        MA+LPIAFSPAAGRVFAATAAKGAGESKKEKGL DWI+G L KDQLLETDP+LQKVEGK+  G         RGRKNSVQ+PPKKNGG FGGLFAKKD
Subjt:  MAALPIAFSPAAGRVFAATAAKGAGESKKEKGLFDWILGGLEKDQLLETDPILQKVEGKNNGGAGAGAADAARGRKNSVQVPPKKNGGGFGGLFAKKD

A0A5A7V5S9 Uncharacterized protein

5.8e-33

79.59

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Query:  MAALPIAFSPAAGRVFAATAAKGAGESKKEKGLFDWILGGLEKDQLLETDPILQKVEGKNNGGAGAGAADAARGRKNSVQVPPKKNGGGFGGLFAKKD
        MA+LPIAFSPAAGRVFAATAAKGAGESKKEKGL DWI+G L KDQLLETDP+LQKVEGK+  G         RGRKNSVQ+PPKKNGG FGGLFAKKD
Subjt:  MAALPIAFSPAAGRVFAATAAKGAGESKKEKGLFDWILGGLEKDQLLETDPILQKVEGKNNGGAGAGAADAARGRKNSVQVPPKKNGGGFGGLFAKKD

A0A6J1G777 uncharacterized protein LOC111451452

2.7e-30

77.55

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Query:  MAALPIAFSPAAGRVFAATAAKGAGESKKEKGLFDWILGGLEKDQLLETDPILQKVEGKNNGGAGAGAADAARGRKNSVQVPPKKNGGGFGGLFAKKD
        MA+L  AFSPAAGRVFAATAAKGAGE KKEKG+ DWILGG+EKDQLLETDP+LQKVEGKN G    G      G+KNSVQVPPKKN G FGGLFAKKD
Subjt:  MAALPIAFSPAAGRVFAATAAKGAGESKKEKGLFDWILGGLEKDQLLETDPILQKVEGKNNGGAGAGAADAARGRKNSVQVPPKKNGGGFGGLFAKKD

A0A6J1L2X7 uncharacterized protein LOC111499927

2.7e-30

77.55

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Query:  MAALPIAFSPAAGRVFAATAAKGAGESKKEKGLFDWILGGLEKDQLLETDPILQKVEGKNNGGAGAGAADAARGRKNSVQVPPKKNGGGFGGLFAKKD
        MA+L  AFSPAAGRVFAATAAKGAGE KKEKG+ DWILGG+EKDQLLETDP+LQKVEGKN G    G      G+KNSVQVPPKKN G FGGLFAKKD
Subjt:  MAALPIAFSPAAGRVFAATAAKGAGESKKEKGLFDWILGGLEKDQLLETDPILQKVEGKNNGGAGAGAADAARGRKNSVQVPPKKNGGGFGGLFAKKD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G47070.1 LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thylakoid soluble phosphoprotein TSP9 (InterPro:IPR021584); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

1.2e-11

44.21

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Query:  MAALPIAFSPAAGRVFAATAAKGAGESKKEKGLFDWILGGLEK-DQLLETDPILQKVEGKNNGGAGAGAADAARGRKNSVQVP-PKKNGGGFGGL
        +++L ++F+PA  RV+A +   G+G  K+EK   D++LG + K DQ  ET+P+L+KV+ K   G   G     RG KNS   P PKK+ GGFGGL
Subjt:  MAALPIAFSPAAGRVFAATAAKGAGESKKEKGLFDWILGGLEK-DQLLETDPILQKVEGKNNGGAGAGAADAARGRKNSVQVP-PKKNGGGFGGL

Sequences

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CDS sequence

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ATGGCTGCTCTGCCCATCGCATTCTCTCCGGCCGCCGGACGGGTCTTCGCGGCCACGGCGGCCAAGGGCGCCGGCGAAAGCAAGAAAGAGAAGGGCCTTTTCGATTGGAT
CCTCGGCGGCCTCGAGAAGGATCAGCTTCTCGAAACCGACCCCATTCTTCAAAAGGTCGAGGGGAAGAACAACGGCGGCGCCGGCGCCGGCGCTGCTGACGCTGCCCGTG
GCCGGAAGAACTCCGTCCAAGTCCCGCCCAAGAAGAACGGCGGCGGATTCGGCGGTCTATTTGCCAAGAAAGAC

mRNA sequence

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Protein sequence

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MAALPIAFSPAAGRVFAATAAKGAGESKKEKGLFDWILGGLEKDQLLETDPILQKVEGKNNGGAGAGAADAARGRKNSVQVPPKKNGGGFGGLFAKKD

MS014218 (gene) of Bitter gourd (TR) v1 genome