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MS014238 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014238
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptioncircumsporozoite protein-like
Genome locationscaffold5:1583078..1583398
RNA-Seq ExpressionMS014238
SyntenyMS014238
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570682.1 hypothetical protein SDJN03_29597, partial [Cucurbita argyrosperma subsp. sororia]2.1e-2276.15Show/hide
Query:  MESTKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAAAGGGSDAAVAAVVVMGTTAATMDAV-EDDGGSAHGHGG
        MES+KICFCIPRHKN HK +GGSEKSSKSKPSRRKS  G K GKHSSSSDSSG+G  NTGAA+  GS AAVAA+ V   TA TMDAV EDDGGS H HGG
Subjt:  MESTKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAAAGGGSDAAVAAVVVMGTTAATMDAV-EDDGGSAHGHGG

Query:  -GGEGGGGD
         GG GGGGD
Subjt:  -GGEGGGGD

KAG6605437.1 hypothetical protein SDJN03_02754, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2374.31Show/hide
Query:  MESTKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAAAGGGSDAAVAAV-VVMGTTAATMDAVEDDGGSAHGHGG
        MES+KICFCIPRHKNG KA+GGSEKSSKSKPSRRKSRR  KGGKHS SSDSSGDG  NTG A    + AAVAAV V    T   +DA+EDDGGS+HGHGG
Subjt:  MESTKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAAAGGGSDAAVAAV-VVMGTTAATMDAVEDDGGSAHGHGG

Query:  -GGEGGGGD
         GG GGGGD
Subjt:  -GGEGGGGD

KAG7035385.1 hypothetical protein SDJN02_02181 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-2374.31Show/hide
Query:  MESTKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAAAGGGSDAAVAAV-VVMGTTAATMDAVEDDGGSAHGHGG
        MES+KICFCIPRHKNG KA+GGSEKSSKSKPSRRKSRR  KGGKHS SSDSSGDG  NTG A    + AAVAAV V    T   +DA+EDDGGS+HGHGG
Subjt:  MESTKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAAAGGGSDAAVAAV-VVMGTTAATMDAVEDDGGSAHGHGG

Query:  -GGEGGGGD
         GG GGGGD
Subjt:  -GGEGGGGD

TYK15390.1 tropomyosin [Cucumis melo var. makuwa]3.6e-2273.33Show/hide
Query:  STKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAAAGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGG-GG
        S+KICFCIPRHKNGHKA+GGSEKSSKSKPSRRKSRRG K GKHSS SDSSG+GN+     AG  S  AVAAV V   TA TMDA++DDGGS H HGG GG
Subjt:  STKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAAAGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGG-GG

Query:  EGGGG
         GG G
Subjt:  EGGGG

XP_022148326.1 circumsporozoite protein-like [Momordica charantia]3.3e-44100Show/hide
Query:  MESTKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAAAGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGGG
        MESTKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAAAGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGGG
Subjt:  MESTKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAAAGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGGG

Query:  GEGGGGD
        GEGGGGD
Subjt:  GEGGGGD

TrEMBL top hitse value%identityAlignment
A0A0A0KFD0 Uncharacterized protein1.1e-2172.64Show/hide
Query:  STKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAAAGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGG-GG
        S+KICFCIPRHKNGHKA+GGSEKSSKSKPSRRKS R  K GKHSSSSDSSG+GN     AA   S  AVAAV V   TA TMDA++DDGGS H HGG GG
Subjt:  STKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAAAGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGG-GG

Query:  EGGGGD
         G GGD
Subjt:  EGGGGD

A0A5A7V5U9 Tropomyosin1.7e-2273.33Show/hide
Query:  STKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAAAGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGG-GG
        S+KICFCIPRHKNGHKA+GGSEKSSKSKPSRRKSRRG K GKHSS SDSSG+GN+     AG  S  AVAAV V   TA TMDA++DDGGS H HGG GG
Subjt:  STKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAAAGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGG-GG

Query:  EGGGG
         GG G
Subjt:  EGGGG

A0A5D3CVK1 Tropomyosin1.7e-2273.33Show/hide
Query:  STKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAAAGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGG-GG
        S+KICFCIPRHKNGHKA+GGSEKSSKSKPSRRKSRRG K GKHSS SDSSG+GN+     AG  S  AVAAV V   TA TMDA++DDGGS H HGG GG
Subjt:  STKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAAAGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGG-GG

Query:  EGGGG
         GG G
Subjt:  EGGGG

A0A6J1D515 circumsporozoite protein-like1.6e-44100Show/hide
Query:  MESTKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAAAGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGGG
        MESTKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAAAGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGGG
Subjt:  MESTKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAAAGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGGG

Query:  GEGGGGD
        GEGGGGD
Subjt:  GEGGGGD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCCACAAAGATCTGTTTCTGTATTCCTCGCCATAAAAATGGCCACAAAGCTAATGGCGGATCAGAGAAATCTTCCAAATCAAAGCCTTCCCGCCGCAAATCTCG
TCGAGGTGAAAAAGGAGGTAAGCATTCCTCTAGTAGTGATAGTAGTGGAGATGGCAACACAAACACAGGTGCTGCTGCAGGTGGAGGCAGTGATGCCGCCGTGGCTGCTG
TCGTTGTGATGGGTACGACAGCGGCAACCATGGATGCCGTTGAGGATGACGGTGGCAGTGCCCATGGCCACGGCGGTGGTGGTGAGGGAGGTGGCGGAGAT
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCCACAAAGATCTGTTTCTGTATTCCTCGCCATAAAAATGGCCACAAAGCTAATGGCGGATCAGAGAAATCTTCCAAATCAAAGCCTTCCCGCCGCAAATCTCG
TCGAGGTGAAAAAGGAGGTAAGCATTCCTCTAGTAGTGATAGTAGTGGAGATGGCAACACAAACACAGGTGCTGCTGCAGGTGGAGGCAGTGATGCCGCCGTGGCTGCTG
TCGTTGTGATGGGTACGACAGCGGCAACCATGGATGCCGTTGAGGATGACGGTGGCAGTGCCCATGGCCACGGCGGTGGTGGTGAGGGAGGTGGCGGAGAT
Protein sequenceShow/hide protein sequence
MESTKICFCIPRHKNGHKANGGSEKSSKSKPSRRKSRRGEKGGKHSSSSDSSGDGNTNTGAAAGGGSDAAVAAVVVMGTTAATMDAVEDDGGSAHGHGGGGEGGGGD