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MS014241 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014241
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMajor viral transcription factor
Genome locationscaffold5:1601128..1601556
RNA-Seq ExpressionMS014241
SyntenyMS014241
Gene Ontology termsNA
InterPro domainsIPR040381 - Uncharacterized protein At4g14450-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570684.1 hypothetical protein SDJN03_29599, partial [Cucurbita argyrosperma subsp. sororia]6.4e-4368.28Show/hide
Query:  MNANQSAVIDFLRASMEKEHKAKSRIPKPPTRLQKQAPASLHLDQVSSTSMAPGGAETSSKAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVD--G
        MNANQSAV+DFLRA+M+ +     RIPKPPTRLQKQAPA L+LDQ+SS SM   G ET SK +LPLLSPLP SPQP+PETE N       AN N V+  G
Subjt:  MNANQSAVIDFLRASMEKEHKAKSRIPKPPTRLQKQAPASLHLDQVSSTSMAPGGAETSSKAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVD--G

Query:  GGDQRGICFAAPGGWQHPAVAAAFPDPSTLFTFFQSQCMVTSNTP
         GDQRGI FA+PGGWQHPAVAA + DPSTLFTFFQS+C++TS+TP
Subjt:  GGDQRGICFAAPGGWQHPAVAAAFPDPSTLFTFFQSQCMVTSNTP

KAG6605440.1 hypothetical protein SDJN03_02757, partial [Cucurbita argyrosperma subsp. sororia]3.0e-4875Show/hide
Query:  MNANQSAVIDFLRASMEKEHKAKSRIPKPPTRLQKQAPASLHLDQVSSTSMAPGGAETSSKAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVDGG-
        MNANQ+ V+DF  A+MEKEH  KSR+PKPPTRLQKQAPASLHLDQ++S SM+ G A+ SSKAILPLLSPLP SPQP+PETE N      AAN N VDGG 
Subjt:  MNANQSAVIDFLRASMEKEHKAKSRIPKPPTRLQKQAPASLHLDQVSSTSMAPGGAETSSKAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVDGG-

Query:  GDQRGICFAAPGGWQHPAVAAAFPDPSTLFTFFQSQCMVTSNTP
        GDQRGICFA PGGWQHPAVA  F DPSTLFTFFQSQC+V S TP
Subjt:  GDQRGICFAAPGGWQHPAVAAAFPDPSTLFTFFQSQCMVTSNTP

XP_011657141.1 uncharacterized protein LOC105435808 [Cucumis sativus]7.3e-4773.97Show/hide
Query:  MNANQSAVIDFLRASMEKEHKAKSRIPKPPTRLQKQAPASLHLDQVSSTSMAPGGAETSSKAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVDGG-
        M+ANQ+ V+DFLR SME E+  K R+PKPPTRLQKQAPASLHLDQ+SS SM+    +  SKAILPLLSPLPLSPQP PE +    NR+S AN NAVDGG 
Subjt:  MNANQSAVIDFLRASMEKEHKAKSRIPKPPTRLQKQAPASLHLDQVSSTSMAPGGAETSSKAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVDGG-

Query:  --GDQRGICFAAPGGWQHPAVAAAFPDPSTLFTFFQSQCMVTSNTP
          GDQRGI F APGGWQHPAVAA FPDPSTLFTFFQSQCMV+SNTP
Subjt:  --GDQRGICFAAPGGWQHPAVAAAFPDPSTLFTFFQSQCMVTSNTP

XP_022148421.1 uncharacterized protein LOC111017071 [Momordica charantia]3.0e-48100Show/hide
Query:  MNANQSAVIDFLRASMEKEHKAKSRIPKPPTRLQKQAPASLHLDQVSSTSMAPGGAETSSKAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVDGGG
        MNANQSAVIDFLRASMEKEHKAKSRIPKPPTRLQKQAPASLHLDQVSSTSMAPGGAETSSKAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVDGGG
Subjt:  MNANQSAVIDFLRASMEKEHKAKSRIPKPPTRLQKQAPASLHLDQVSSTSMAPGGAETSSKAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVDGGG

Query:  DQRG
        DQRG
Subjt:  DQRG

XP_038902307.1 uncharacterized protein LOC120088941 [Benincasa hispida]1.4e-5078.08Show/hide
Query:  MNANQSAVIDFLRASMEKEHKAKSRIPKPPTRLQKQAPASLHLDQVSSTSMAPGGAETSSKAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVDGG-
        MNANQ+ V+DFLR SME EHKA  R+PKPPTRLQKQAPASLHLDQ+SS SM+ G A+T SKAILPLLSPLPLSPQP PE +    NR+S AN NA DGG 
Subjt:  MNANQSAVIDFLRASMEKEHKAKSRIPKPPTRLQKQAPASLHLDQVSSTSMAPGGAETSSKAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVDGG-

Query:  --GDQRGICFAAPGGWQHPAVAAAFPDPSTLFTFFQSQCMVTSNTP
          GDQRGI FAAPGGWQHPAVAA FPDPSTLFTFFQSQC+VTSNTP
Subjt:  --GDQRGICFAAPGGWQHPAVAAAFPDPSTLFTFFQSQCMVTSNTP

TrEMBL top hitse value%identityAlignment
A0A0A0KBQ7 Uncharacterized protein3.6e-4773.97Show/hide
Query:  MNANQSAVIDFLRASMEKEHKAKSRIPKPPTRLQKQAPASLHLDQVSSTSMAPGGAETSSKAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVDGG-
        M+ANQ+ V+DFLR SME E+  K R+PKPPTRLQKQAPASLHLDQ+SS SM+    +  SKAILPLLSPLPLSPQP PE +    NR+S AN NAVDGG 
Subjt:  MNANQSAVIDFLRASMEKEHKAKSRIPKPPTRLQKQAPASLHLDQVSSTSMAPGGAETSSKAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVDGG-

Query:  --GDQRGICFAAPGGWQHPAVAAAFPDPSTLFTFFQSQCMVTSNTP
          GDQRGI F APGGWQHPAVAA FPDPSTLFTFFQSQCMV+SNTP
Subjt:  --GDQRGICFAAPGGWQHPAVAAAFPDPSTLFTFFQSQCMVTSNTP

A0A1Q3CDI7 Uncharacterized protein9.4e-1650.41Show/hide
Query:  KAKSRIPKPPTRLQKQAPASLHLDQVSSTSMAPG---GAETSSKAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVDGGGDQRGICFAAPGGWQHPA
        KAK++  KPPTRLQK APASL LDQV  +  A      AET   AI PLLSPL +SP+   ETEE      S ++    D  GD++   FA  GGWQHPA
Subjt:  KAKSRIPKPPTRLQKQAPASLHLDQVSSTSMAPG---GAETSSKAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVDGGGDQRGICFAAPGGWQHPA

Query:  VAAAFPDPSTLFTFFQSQCMVTS
        VA    +PS+LF FFQS+C++ +
Subjt:  VAAAFPDPSTLFTFFQSQCMVTS

A0A5A7V856 Uncharacterized protein2.5e-4073.44Show/hide
Query:  EHKAKSRIPKPPTRLQKQAPASLHLDQVSSTSMAPGGAETSSKAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVDGG---GDQRGICFAAPGGWQH
        E++ K R+PKPPTRLQKQAPASLHLDQ+SS SM+    +T SKAILPLLSPLPLSPQP PE +    NR+SA   NAV+GG   GDQRGI F APGGWQH
Subjt:  EHKAKSRIPKPPTRLQKQAPASLHLDQVSSTSMAPGGAETSSKAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVDGG---GDQRGICFAAPGGWQH

Query:  PAVAAAFPDPSTLFTFFQSQCMVTSNTP
        PAVAA FPDPSTLFTFFQSQC+V+SNTP
Subjt:  PAVAAAFPDPSTLFTFFQSQCMVTSNTP

A0A6J1D5B7 uncharacterized protein LOC1110170711.4e-48100Show/hide
Query:  MNANQSAVIDFLRASMEKEHKAKSRIPKPPTRLQKQAPASLHLDQVSSTSMAPGGAETSSKAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVDGGG
        MNANQSAVIDFLRASMEKEHKAKSRIPKPPTRLQKQAPASLHLDQVSSTSMAPGGAETSSKAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVDGGG
Subjt:  MNANQSAVIDFLRASMEKEHKAKSRIPKPPTRLQKQAPASLHLDQVSSTSMAPGGAETSSKAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVDGGG

Query:  DQRG
        DQRG
Subjt:  DQRG

A0A6P3ZH11 uncharacterized protein LOC1074110181.5e-1655.26Show/hide
Query:  KPPTRLQKQAPASLHLDQVSSTSMAPGGAETSSKAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVDGGGDQRGICFAAPG-GWQHPAVAAAFPDPS
        KPPTRLQK+APASL LDQV  TS A      +SKAI PLLSPL LSPQP PE  E       AA+++ V+   D+R      P  GWQHPAV   F DPS
Subjt:  KPPTRLQKQAPASLHLDQVSSTSMAPGGAETSSKAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVDGGGDQRGICFAAPG-GWQHPAVAAAFPDPS

Query:  TLFTFFQSQCMVTS
        +LF FFQSQC++ +
Subjt:  TLFTFFQSQCMVTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G07473.1 unknown protein1.9e-0546.3Show/hide
Query:  KSRIPKPPTRLQKQAPASLHLDQVSSTSMAPGGAETSSKAILPLLSPLPLSPQP
        KS  P+ PTRLQKQAP +LHL  V         ++      +PLLSPL +SP P
Subjt:  KSRIPKPPTRLQKQAPASLHLDQVSSTSMAPGGAETSSKAILPLLSPLPLSPQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCGAATCAATCTGCCGTCATCGATTTTCTCAGAGCATCCATGGAGAAGGAGCACAAGGCCAAATCCAGAATACCTAAACCTCCGACCAGGTTACAGAAGCAAGC
GCCGGCGAGTCTTCATCTCGATCAAGTTTCGAGCACCTCCATGGCTCCTGGTGGTGCCGAGACTTCTTCGAAAGCGATTCTTCCTCTTCTGTCGCCGCTCCCTTTGTCGC
CGCAACCTTGGCCTGAAACGGAGGAAAATAATACTAATAGAGTATCAGCAGCAAACGAAAATGCCGTAGACGGCGGCGGTGACCAACGAGGTATCTGTTTTGCAGCTCCT
GGTGGCTGGCAACATCCGGCGGTGGCGGCGGCGTTCCCCGATCCTTCCACTCTGTTTACTTTCTTTCAATCGCAGTGCATGGTGACCAGTAACACGCCG
mRNA sequenceShow/hide mRNA sequence
ATGAATGCGAATCAATCTGCCGTCATCGATTTTCTCAGAGCATCCATGGAGAAGGAGCACAAGGCCAAATCCAGAATACCTAAACCTCCGACCAGGTTACAGAAGCAAGC
GCCGGCGAGTCTTCATCTCGATCAAGTTTCGAGCACCTCCATGGCTCCTGGTGGTGCCGAGACTTCTTCGAAAGCGATTCTTCCTCTTCTGTCGCCGCTCCCTTTGTCGC
CGCAACCTTGGCCTGAAACGGAGGAAAATAATACTAATAGAGTATCAGCAGCAAACGAAAATGCCGTAGACGGCGGCGGTGACCAACGAGGTATCTGTTTTGCAGCTCCT
GGTGGCTGGCAACATCCGGCGGTGGCGGCGGCGTTCCCCGATCCTTCCACTCTGTTTACTTTCTTTCAATCGCAGTGCATGGTGACCAGTAACACGCCG
Protein sequenceShow/hide protein sequence
MNANQSAVIDFLRASMEKEHKAKSRIPKPPTRLQKQAPASLHLDQVSSTSMAPGGAETSSKAILPLLSPLPLSPQPWPETEENNTNRVSAANENAVDGGGDQRGICFAAP
GGWQHPAVAAAFPDPSTLFTFFQSQCMVTSNTP