; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS014246 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014246
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor PCL1
Genome locationscaffold5:1618416..1619264
RNA-Seq ExpressionMS014246
SyntenyMS014246
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain
IPR044841 - Transcription factor LUX/BOA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143206.1 transcription factor PCL1 [Cucumis sativus]3.0e-11676.31Show/hide
Query:  MEQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFE-----TRGEDAM
        ME+K RE+  GG N C N DERVLLWEDGLPD + +TPLSQSLISQELASAFRIL EP R++ DVNSAS  T+LNIRDG+SEGYRSFE     TR ED +
Subjt:  MEQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFE-----TRGEDAM

Query:  MVETDETINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQK
        MVE+DE INP + GSDSRKLR+VD VEE NLAP+ ++L EDAA ARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQ+MNVEGLTRENVASHLQK
Subjt:  MVETDETINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQK

Query:  YRLFLKRTQLSSTTDEALVPVPMAQNSQDSAP-SPDAPGNGCFPATFPMTYMPSPMMPMMYFGMGAHGHGLSHTSMPMVNLSNAPAH
        YRL+LKRTQ+SSTTDEALVP+P+ QN+ DS+P + D+ GN  FPATFP+TYMPSPMMPMM++GMGAHGHGLS T+MPMVNL+N P H
Subjt:  YRLFLKRTQLSSTTDEALVPVPMAQNSQDSAP-SPDAPGNGCFPATFPMTYMPSPMMPMMYFGMGAHGHGLSHTSMPMVNLSNAPAH

XP_008464103.1 PREDICTED: transcription factor PCL1 [Cucumis melo]2.7e-11776.31Show/hide
Query:  MEQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFE-----TRGEDAM
        ME+K RE+  GG N C N DERVLLWEDGLPD + +TPLSQSLISQELASAFRIL EP R++ DVNSAS  T++NIRDG+SEGYRSFE     TR ED +
Subjt:  MEQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFE-----TRGEDAM

Query:  MVETDETINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQK
        MVE+DE INP + GSDSRKLR+VD VEE N+AP+ ++L EDAA ARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQ+MNVEGLTRENVASHLQK
Subjt:  MVETDETINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQK

Query:  YRLFLKRTQLSSTTDEALVPVPMAQNSQDSAPS-PDAPGNGCFPATFPMTYMPSPMMPMMYFGMGAHGHGLSHTSMPMVNLSNAPAH
        YRL+LKRTQ+SSTTDEALVP+P+ QN+ DS+PS  D+ GN CFPATFPMTYMP PMMPMM++GMGAHGHGLS T+MPMVNL+N P H
Subjt:  YRLFLKRTQLSSTTDEALVPVPMAQNSQDSAPS-PDAPGNGCFPATFPMTYMPSPMMPMMYFGMGAHGHGLSHTSMPMVNLSNAPAH

XP_022148484.1 transcription factor PCL1 [Momordica charantia]2.7e-154100Show/hide
Query:  MEQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETD
        MEQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETD
Subjt:  MEQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETD

Query:  ETINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKYRLFL
        ETINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKYRLFL
Subjt:  ETINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKYRLFL

Query:  KRTQLSSTTDEALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFGMGAHGHGLSHTSMPMVNLSNAPAH
        KRTQLSSTTDEALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFGMGAHGHGLSHTSMPMVNLSNAPAH
Subjt:  KRTQLSSTTDEALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFGMGAHGHGLSHTSMPMVNLSNAPAH

XP_022947291.1 transcription factor PCL1-like [Cucurbita moschata]1.3e-11676.92Show/hide
Query:  MEQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFE-----TRGEDAM
        MEQK REY + G + C NGDERVLLWE+GLPDAD +TPLSQSLI QELASAFRIL EPRR+ SDV SAS TT+LNIRDG+ EGYRSFE     TRGEDA+
Subjt:  MEQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFE-----TRGEDAM

Query:  MVETDETINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQK
        MVE+DE ++P E GSDSR LRKVD V E NLAP+ +NL EDAA ARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIM+LMNV+GLTRENVASHLQK
Subjt:  MVETDETINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQK

Query:  YRLFLKRTQLSSTTDEALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFGMGAHGHGLSHTSMPMVNLSNAPAH
        YRL+LKRTQ+SSTTDEALVP+PM QNS DS+PS D+ GN   PATFPMTYMPSPMMPMM +GMGAHGHGL+ T MPM+N+   P H
Subjt:  YRLFLKRTQLSSTTDEALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFGMGAHGHGLSHTSMPMVNLSNAPAH

XP_038901082.1 transcription factor PCL1-like [Benincasa hispida]1.2e-11777.27Show/hide
Query:  MEQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSF-----ETRGEDAM
        MEQK REY  GG N   NGDERVLLWEDGLPD +++TPLSQSLISQELASAFRIL EP R++ DVNSAS TT++NIRDG+SEGYRSF     +T  ED +
Subjt:  MEQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSF-----ETRGEDAM

Query:  MVETDETINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQK
        MVE+DE INP E GSD+RKLR+ D VEE NLAP+ ++L EDAA ARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQ+MNVEGLTRENVASHLQK
Subjt:  MVETDETINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQK

Query:  YRLFLKRTQLSSTTDEALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFGMGAHGHGLSHTSMPMVNLSNAPAH
        YRL+LKRTQ+SSTTDEALVP+P  QNS DS+PS D+ GNG FPATFPMTY+PSPMMPMM++GMGAHGHGLS T MPMVNLS  P H
Subjt:  YRLFLKRTQLSSTTDEALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFGMGAHGHGLSHTSMPMVNLSNAPAH

TrEMBL top hitse value%identityAlignment
A0A0A0KH89 HTH myb-type domain-containing protein1.4e-11676.31Show/hide
Query:  MEQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFE-----TRGEDAM
        ME+K RE+  GG N C N DERVLLWEDGLPD + +TPLSQSLISQELASAFRIL EP R++ DVNSAS  T+LNIRDG+SEGYRSFE     TR ED +
Subjt:  MEQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFE-----TRGEDAM

Query:  MVETDETINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQK
        MVE+DE INP + GSDSRKLR+VD VEE NLAP+ ++L EDAA ARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQ+MNVEGLTRENVASHLQK
Subjt:  MVETDETINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQK

Query:  YRLFLKRTQLSSTTDEALVPVPMAQNSQDSAP-SPDAPGNGCFPATFPMTYMPSPMMPMMYFGMGAHGHGLSHTSMPMVNLSNAPAH
        YRL+LKRTQ+SSTTDEALVP+P+ QN+ DS+P + D+ GN  FPATFP+TYMPSPMMPMM++GMGAHGHGLS T+MPMVNL+N P H
Subjt:  YRLFLKRTQLSSTTDEALVPVPMAQNSQDSAP-SPDAPGNGCFPATFPMTYMPSPMMPMMYFGMGAHGHGLSHTSMPMVNLSNAPAH

A0A1S3CKP6 transcription factor PCL11.3e-11776.31Show/hide
Query:  MEQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFE-----TRGEDAM
        ME+K RE+  GG N C N DERVLLWEDGLPD + +TPLSQSLISQELASAFRIL EP R++ DVNSAS  T++NIRDG+SEGYRSFE     TR ED +
Subjt:  MEQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFE-----TRGEDAM

Query:  MVETDETINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQK
        MVE+DE INP + GSDSRKLR+VD VEE N+AP+ ++L EDAA ARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQ+MNVEGLTRENVASHLQK
Subjt:  MVETDETINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQK

Query:  YRLFLKRTQLSSTTDEALVPVPMAQNSQDSAPS-PDAPGNGCFPATFPMTYMPSPMMPMMYFGMGAHGHGLSHTSMPMVNLSNAPAH
        YRL+LKRTQ+SSTTDEALVP+P+ QN+ DS+PS  D+ GN CFPATFPMTYMP PMMPMM++GMGAHGHGLS T+MPMVNL+N P H
Subjt:  YRLFLKRTQLSSTTDEALVPVPMAQNSQDSAPS-PDAPGNGCFPATFPMTYMPSPMMPMMYFGMGAHGHGLSHTSMPMVNLSNAPAH

A0A5D3CU36 Transcription factor PCL11.3e-11776.31Show/hide
Query:  MEQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFE-----TRGEDAM
        ME+K RE+  GG N C N DERVLLWEDGLPD + +TPLSQSLISQELASAFRIL EP R++ DVNSAS  T++NIRDG+SEGYRSFE     TR ED +
Subjt:  MEQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFE-----TRGEDAM

Query:  MVETDETINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQK
        MVE+DE INP + GSDSRKLR+VD VEE N+AP+ ++L EDAA ARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQ+MNVEGLTRENVASHLQK
Subjt:  MVETDETINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQK

Query:  YRLFLKRTQLSSTTDEALVPVPMAQNSQDSAPS-PDAPGNGCFPATFPMTYMPSPMMPMMYFGMGAHGHGLSHTSMPMVNLSNAPAH
        YRL+LKRTQ+SSTTDEALVP+P+ QN+ DS+PS  D+ GN CFPATFPMTYMP PMMPMM++GMGAHGHGLS T+MPMVNL+N P H
Subjt:  YRLFLKRTQLSSTTDEALVPVPMAQNSQDSAPS-PDAPGNGCFPATFPMTYMPSPMMPMMYFGMGAHGHGLSHTSMPMVNLSNAPAH

A0A6J1D451 transcription factor PCL11.3e-154100Show/hide
Query:  MEQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETD
        MEQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETD
Subjt:  MEQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETD

Query:  ETINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKYRLFL
        ETINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKYRLFL
Subjt:  ETINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKYRLFL

Query:  KRTQLSSTTDEALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFGMGAHGHGLSHTSMPMVNLSNAPAH
        KRTQLSSTTDEALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFGMGAHGHGLSHTSMPMVNLSNAPAH
Subjt:  KRTQLSSTTDEALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFGMGAHGHGLSHTSMPMVNLSNAPAH

A0A6J1G605 transcription factor PCL1-like6.4e-11776.92Show/hide
Query:  MEQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFE-----TRGEDAM
        MEQK REY + G + C NGDERVLLWE+GLPDAD +TPLSQSLI QELASAFRIL EPRR+ SDV SAS TT+LNIRDG+ EGYRSFE     TRGEDA+
Subjt:  MEQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFE-----TRGEDAM

Query:  MVETDETINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQK
        MVE+DE ++P E GSDSR LRKVD V E NLAP+ +NL EDAA ARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIM+LMNV+GLTRENVASHLQK
Subjt:  MVETDETINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQK

Query:  YRLFLKRTQLSSTTDEALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFGMGAHGHGLSHTSMPMVNLSNAPAH
        YRL+LKRTQ+SSTTDEALVP+PM QNS DS+PS D+ GN   PATFPMTYMPSPMMPMM +GMGAHGHGL+ T MPM+N+   P H
Subjt:  YRLFLKRTQLSSTTDEALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFGMGAHGHGLSHTSMPMVNLSNAPAH

SwissProt top hitse value%identityAlignment
A2XE31 Two-component response regulator ORR217.3e-1758.82Show/hide
Query:  EDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKYRLFLKR
        E    + T K+PR+ W+ +LH++FV+ V+HLG+  A PK I++LMNV GLTRENVASHLQK+RL+LKR
Subjt:  EDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKYRLFLKR

O22210 Transcription factor MYBC18.3e-2945.3Show/hide
Query:  LLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETDETINPVESGSDSRKLRKVDLVEE
        L WE+ LP  + + P+SQ+LI+  LA AF+I   P   +     +  TT +  +  +S    +  T     MM+ +D        G DS  L    +  E
Subjt:  LLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETDETINPVESGSDSRKLRKVDLVEE

Query:  VNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKYRLFLKRTQ
                        ARTLKRPRL WTPQLHKRFVD V HLG+K+A PK IMQLM+VEGLTRENVASHLQKYRL+L+R Q
Subjt:  VNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKYRLFLKRTQ

Q94DH3 Transcription factor PCL19.8e-3847.06Show/hide
Query:  EQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETDE
        E+   EY  GG       DERV+ WE GLP AD +TPLSQ L+   LA+AFRI  EP RT+ DV+ AS  T+  +R   S    SF            DE
Subjt:  EQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETDE

Query:  TINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKYRLFLK
             ESG                 A      T +++     KR RL WTPQLHKRFV+VV+HLG+K+A PK IMQLMNVEGLTRENVASHLQKYRL++K
Subjt:  TINPVESGSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKYRLFLK

Query:  RTQ-LS----STTDE--ALVPVPMAQNSQDSAPSPDAP
        R Q LS    S +D   A  PVP A +  D  PSP  P
Subjt:  RTQ-LS----STTDE--ALVPVPMAQNSQDSAPSPDAP

Q9LTH4 Transcription factor BOA6.1e-4042.38Show/hide
Query:  EQKAREYCSGGLNSCANGDE-RVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETD
        E    +Y          GDE R+  WE GLP+ D++TPLSQ L+   LA AF ++ E  RT+ DVN AS  TL ++R           +    ++M E  
Subjt:  EQKAREYCSGGLNSCANGDE-RVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETD

Query:  ETINPVESGSDSRKLRKVDLVE----EVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKY
        + +     GSD +K +K D  E    E + A +  +  EDA+  +T KRPRL WTPQLHKRFVDVV+HLG+K+A PK IMQLMNVEGLTRENVASHLQKY
Subjt:  ETINPVESGSDSRKLRKVDLVE----EVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKY

Query:  RLFLKRTQLSSTTDEALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFG--MGAHGH
        RL+LKR Q  +T ++         +S    P     G G          +PS M+P+  +G  MG  G+
Subjt:  RLFLKRTQLSSTTDEALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFG--MGAHGH

Q9SNB4 Transcription factor LUX1.0e-3945.09Show/hide
Query:  NGD-ERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETDETINPVESGSDSRKLR
        +GD +RV  WE GLP  +++  LS SLI   LA AF I  E  RT+ DVN AS TTL ++R G S    S          VE ++ +     GSDS+K +
Subjt:  NGD-ERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETDETINPVESGSDSRKLR

Query:  K----------VDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKYRLFLKRTQ--
                   VD  +    A +  + TED +  +TLKRPRL WTPQLHKRFVDVV+HLG+K+A PK IMQLMNVEGLTRENVASHLQKYRL+LKR Q  
Subjt:  K----------VDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKYRLFLKRTQ--

Query:  ---LSSTTDE--ALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFG--MGAHG-HGLSHTSMP
             S +D+  +  PVP  Q+ QD      + GN   P   P  Y    MM M  +   MG  G H  +H   P
Subjt:  ---LSSTTDE--ALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFG--MGAHG-HGLSHTSMP

Arabidopsis top hitse value%identityAlignment
AT2G40970.1 Homeodomain-like superfamily protein5.9e-3045.3Show/hide
Query:  LLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETDETINPVESGSDSRKLRKVDLVEE
        L WE+ LP  + + P+SQ+LI+  LA AF+I   P   +     +  TT +  +  +S    +  T     MM+ +D        G DS  L    +  E
Subjt:  LLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETDETINPVESGSDSRKLRKVDLVEE

Query:  VNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKYRLFLKRTQ
                        ARTLKRPRL WTPQLHKRFVD V HLG+K+A PK IMQLM+VEGLTRENVASHLQKYRL+L+R Q
Subjt:  VNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKYRLFLKRTQ

AT3G46640.1 Homeodomain-like superfamily protein7.4e-4145.09Show/hide
Query:  NGD-ERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETDETINPVESGSDSRKLR
        +GD +RV  WE GLP  +++  LS SLI   LA AF I  E  RT+ DVN AS TTL ++R G S    S          VE ++ +     GSDS+K +
Subjt:  NGD-ERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETDETINPVESGSDSRKLR

Query:  K----------VDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKYRLFLKRTQ--
                   VD  +    A +  + TED +  +TLKRPRL WTPQLHKRFVDVV+HLG+K+A PK IMQLMNVEGLTRENVASHLQKYRL+LKR Q  
Subjt:  K----------VDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKYRLFLKRTQ--

Query:  ---LSSTTDE--ALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFG--MGAHG-HGLSHTSMP
             S +D+  +  PVP  Q+ QD      + GN   P   P  Y    MM M  +   MG  G H  +H   P
Subjt:  ---LSSTTDE--ALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFG--MGAHG-HGLSHTSMP

AT3G46640.2 Homeodomain-like superfamily protein7.4e-4145.09Show/hide
Query:  NGD-ERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETDETINPVESGSDSRKLR
        +GD +RV  WE GLP  +++  LS SLI   LA AF I  E  RT+ DVN AS TTL ++R G S    S          VE ++ +     GSDS+K +
Subjt:  NGD-ERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETDETINPVESGSDSRKLR

Query:  K----------VDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKYRLFLKRTQ--
                   VD  +    A +  + TED +  +TLKRPRL WTPQLHKRFVDVV+HLG+K+A PK IMQLMNVEGLTRENVASHLQKYRL+LKR Q  
Subjt:  K----------VDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKYRLFLKRTQ--

Query:  ---LSSTTDE--ALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFG--MGAHG-HGLSHTSMP
             S +D+  +  PVP  Q+ QD      + GN   P   P  Y    MM M  +   MG  G H  +H   P
Subjt:  ---LSSTTDE--ALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFG--MGAHG-HGLSHTSMP

AT3G46640.3 Homeodomain-like superfamily protein7.4e-4145.09Show/hide
Query:  NGD-ERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETDETINPVESGSDSRKLR
        +GD +RV  WE GLP  +++  LS SLI   LA AF I  E  RT+ DVN AS TTL ++R G S    S          VE ++ +     GSDS+K +
Subjt:  NGD-ERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETDETINPVESGSDSRKLR

Query:  K----------VDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKYRLFLKRTQ--
                   VD  +    A +  + TED +  +TLKRPRL WTPQLHKRFVDVV+HLG+K+A PK IMQLMNVEGLTRENVASHLQKYRL+LKR Q  
Subjt:  K----------VDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKYRLFLKRTQ--

Query:  ---LSSTTDE--ALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFG--MGAHG-HGLSHTSMP
             S +D+  +  PVP  Q+ QD      + GN   P   P  Y    MM M  +   MG  G H  +H   P
Subjt:  ---LSSTTDE--ALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFG--MGAHG-HGLSHTSMP

AT5G59570.1 Homeodomain-like superfamily protein4.4e-4142.38Show/hide
Query:  EQKAREYCSGGLNSCANGDE-RVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETD
        E    +Y          GDE R+  WE GLP+ D++TPLSQ L+   LA AF ++ E  RT+ DVN AS  TL ++R           +    ++M E  
Subjt:  EQKAREYCSGGLNSCANGDE-RVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETD

Query:  ETINPVESGSDSRKLRKVDLVE----EVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKY
        + +     GSD +K +K D  E    E + A +  +  EDA+  +T KRPRL WTPQLHKRFVDVV+HLG+K+A PK IMQLMNVEGLTRENVASHLQKY
Subjt:  ETINPVESGSDSRKLRKVDLVE----EVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKY

Query:  RLFLKRTQLSSTTDEALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFG--MGAHGH
        RL+LKR Q  +T ++         +S    P     G G          +PS M+P+  +G  MG  G+
Subjt:  RLFLKRTQLSSTTDEALVPVPMAQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFG--MGAHGH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTGTTATGGAGCAAAAGGCGCGGGAGTACTGTTCTGGTGGGCTTAATAGCTGTGCTAATGGCGATGAAAGAGTTCTTCTGTGGGAGGATGGACTGCCCGACGCCGATAA
TGTAACCCCTCTTTCTCAATCTTTGATATCGCAGGAACTCGCTTCGGCGTTCCGGATCTTGGCGGAACCTCGTCGGACTGTATCGGATGTTAATTCGGCGTCGAATACGA
CGCTACTGAATATACGCGATGGAGAATCGGAAGGATACAGAAGTTTCGAGACGCGGGGTGAAGACGCGATGATGGTTGAGACGGACGAGACGATTAATCCAGTCGAGTCG
GGGTCCGATTCACGGAAATTGAGGAAGGTTGATTTGGTTGAAGAGGTGAATTTAGCGCCTCAGGTCAAGAATTTGACCGAGGATGCGGCTGAGGCTCGAACCTTGAAGCG
GCCGCGGCTCGCCTGGACTCCGCAATTGCACAAGCGGTTCGTGGATGTGGTTTCTCATTTAGGGCTCAAAGACGCAGCTCCCAAAGCCATTATGCAATTGATGAACGTGG
AAGGATTGACTCGCGAGAACGTTGCCAGCCACCTACAGAAGTATCGACTCTTCTTGAAGAGGACGCAGCTATCCTCAACCACCGACGAGGCTCTCGTTCCGGTGCCGATG
GCGCAGAACTCACAGGATTCTGCTCCCAGTCCCGATGCACCAGGAAACGGGTGTTTTCCGGCTACTTTTCCGATGACGTATATGCCATCTCCGATGATGCCTATGATGTA
TTTTGGTATGGGAGCTCATGGTCACGGTCTTAGTCATACCAGCATGCCAATGGTTAACCTGAGCAACGCGCCGGCCCAC
mRNA sequenceShow/hide mRNA sequence
TTTGTTATGGAGCAAAAGGCGCGGGAGTACTGTTCTGGTGGGCTTAATAGCTGTGCTAATGGCGATGAAAGAGTTCTTCTGTGGGAGGATGGACTGCCCGACGCCGATAA
TGTAACCCCTCTTTCTCAATCTTTGATATCGCAGGAACTCGCTTCGGCGTTCCGGATCTTGGCGGAACCTCGTCGGACTGTATCGGATGTTAATTCGGCGTCGAATACGA
CGCTACTGAATATACGCGATGGAGAATCGGAAGGATACAGAAGTTTCGAGACGCGGGGTGAAGACGCGATGATGGTTGAGACGGACGAGACGATTAATCCAGTCGAGTCG
GGGTCCGATTCACGGAAATTGAGGAAGGTTGATTTGGTTGAAGAGGTGAATTTAGCGCCTCAGGTCAAGAATTTGACCGAGGATGCGGCTGAGGCTCGAACCTTGAAGCG
GCCGCGGCTCGCCTGGACTCCGCAATTGCACAAGCGGTTCGTGGATGTGGTTTCTCATTTAGGGCTCAAAGACGCAGCTCCCAAAGCCATTATGCAATTGATGAACGTGG
AAGGATTGACTCGCGAGAACGTTGCCAGCCACCTACAGAAGTATCGACTCTTCTTGAAGAGGACGCAGCTATCCTCAACCACCGACGAGGCTCTCGTTCCGGTGCCGATG
GCGCAGAACTCACAGGATTCTGCTCCCAGTCCCGATGCACCAGGAAACGGGTGTTTTCCGGCTACTTTTCCGATGACGTATATGCCATCTCCGATGATGCCTATGATGTA
TTTTGGTATGGGAGCTCATGGTCACGGTCTTAGTCATACCAGCATGCCAATGGTTAACCTGAGCAACGCGCCGGCCCAC
Protein sequenceShow/hide protein sequence
FVMEQKAREYCSGGLNSCANGDERVLLWEDGLPDADNVTPLSQSLISQELASAFRILAEPRRTVSDVNSASNTTLLNIRDGESEGYRSFETRGEDAMMVETDETINPVES
GSDSRKLRKVDLVEEVNLAPQVKNLTEDAAEARTLKRPRLAWTPQLHKRFVDVVSHLGLKDAAPKAIMQLMNVEGLTRENVASHLQKYRLFLKRTQLSSTTDEALVPVPM
AQNSQDSAPSPDAPGNGCFPATFPMTYMPSPMMPMMYFGMGAHGHGLSHTSMPMVNLSNAPAH