CuGenDBv2

Gene ID	MS014247
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Transmembrane protein
Genome location	scaffold5:1620549..1621180
RNA-Seq Expression	MS014247
Synteny	MS014247
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6605444.1 hypothetical protein SDJN03_02761, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-47

74.85

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Query:  MATTISTSLSLPIFLSTFNPKPHQFLRLRSSSTPNI----LSRRPALLVLNPLRQNSARGNSIRRLHATSEQTLASESAALVEKSQEITSSGDDGVSTII
        MATT STSLSLPIFLS+ NP  ++    RSSS        LSRRPA LV   L QN  R  SIRRLHA SE+TLASESAALVEKSQEI S+GDDGVSTII
Subjt:  MATTISTSLSLPIFLSTFNPKPHQFLRLRSSSTPNI----LSRRPALLVLNPLRQNSARGNSIRRLHATSEQTLASESAALVEKSQEITSSGDDGVSTII

Query:  SALLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEETAKNKKSGKKK--KVRARAGPRGFGQKIEEEE
        S LLFVAF+GLS+LTIGVIYIAVTDFLQKREKEKFEKEE A NKKSGKKK  KV+A+AGPRGFGQK+E+EE
Subjt:  SALLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEETAKNKKSGKKK--KVRARAGPRGFGQKIEEEE

XP_022148488.1 uncharacterized protein LOC111017113 [Momordica charantia]

4.4e-75

99.4

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Query:  MATTISTSLSLPIFLSTFNPKPHQFLRLRSSSTPNILSRRPALLVLNPLRQNSARGNSIRRLHATSEQTLASESAALVEKSQEITSSGDDGVSTIISALL
        MATTISTSLSLPIFLSTFNPKPHQFLRLRSSSTPNILSRRPALLVLNPLRQNSARGNSIRRLHATSEQTLASESAALVEKSQEITSSGDDGVSTIISALL
Subjt:  MATTISTSLSLPIFLSTFNPKPHQFLRLRSSSTPNILSRRPALLVLNPLRQNSARGNSIRRLHATSEQTLASESAALVEKSQEITSSGDDGVSTIISALL

Query:  FVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEETAKNKKSGKKKKVRARAGPRGFGQKIEEEEQ
        FVAFIGLSILTIGVIYIAVTDFLQKREKEKFEK ETAKNKKSGKKKKVRARAGPRGFGQKIEEEEQ
Subjt:  FVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEETAKNKKSGKKKKVRARAGPRGFGQKIEEEEQ

XP_022947295.1 uncharacterized protein LOC111451198 [Cucurbita moschata]

2.7e-48

75.44

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Query:  MATTISTSLSLPIFLSTFNPKPHQFLRLRSSSTPNI----LSRRPALLVLNPLRQNSARGNSIRRLHATSEQTLASESAALVEKSQEITSSGDDGVSTII
        MATT STSLSLPIFLS+ NP  ++   LRSSS        LSRRPA LV   L QN  R  SIRRLHA SE+TLASESAALVEKSQEI S+GDDGVSTII
Subjt:  MATTISTSLSLPIFLSTFNPKPHQFLRLRSSSTPNI----LSRRPALLVLNPLRQNSARGNSIRRLHATSEQTLASESAALVEKSQEITSSGDDGVSTII

Query:  SALLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEETAKNKKSGKKK--KVRARAGPRGFGQKIEEEE
        S LLFVAF+GLS+LTIGVIYIAVTDFLQKREKEKFEKEE A NKKSGKKK  KV+A+AGPRGFGQK+E+EE
Subjt:  SALLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEETAKNKKSGKKK--KVRARAGPRGFGQKIEEEE

XP_023532311.1 uncharacterized protein LOC111794502 [Cucurbita pepo subsp. pepo]

2.0e-48

76.02

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Query:  MATTISTSLSLPIFLSTFNPKPHQFLRLRSSSTPNI----LSRRPALLVLNPLRQNSARGNSIRRLHATSEQTLASESAALVEKSQEITSSGDDGVSTII
        MATT STSLSLPIFLS+ NP  ++   LRSSS        LSRRP  LV   L QN +R  SIRRLHA SE+TLASESAALVEKSQEI S+GDDGVSTII
Subjt:  MATTISTSLSLPIFLSTFNPKPHQFLRLRSSSTPNI----LSRRPALLVLNPLRQNSARGNSIRRLHATSEQTLASESAALVEKSQEITSSGDDGVSTII

Query:  SALLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEETAKNKKSGKKK--KVRARAGPRGFGQKIEEEE
        S LLFVAFIGLS+LTIGVIYIAVTDFLQKREKEKFEKEE A NKKSGKKK  KV+ARAGPRGFGQK+E+EE
Subjt:  SALLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEETAKNKKSGKKK--KVRARAGPRGFGQKIEEEE

XP_038901778.1 uncharacterized protein LOC120088501 [Benincasa hispida]

4.1e-49

73.99

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Query:  MATTISTSLSLPIFLSTFNPKPHQFL-RLRSSSTPNIL-----SRRPALLVLNPLRQNSARGNSIRRLHATSEQTLASESAALVEKSQEITSSGDDGVST
        MA+T ST LSLPIFLS+ NP   + L  LR SS+P  L     SRR  LL+ NPL QN  +  SIRRLHATSE TLAS+SAALVEKSQEI S+ DDGVST
Subjt:  MATTISTSLSLPIFLSTFNPKPHQFL-RLRSSSTPNIL-----SRRPALLVLNPLRQNSARGNSIRRLHATSEQTLASESAALVEKSQEITSSGDDGVST

Query:  IISALLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEETAKNKKSGKKKKVRARAGPRGFGQKIEEEEQD
        IIS LLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEE  K KKSGKKKKV+A+ GPRGFGQK+EEEE+D
Subjt:  IISALLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEETAKNKKSGKKKKVRARAGPRGFGQKIEEEEQD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CM77 uncharacterized protein LOC103502067

2.1e-43

70.86

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Query:  MATTISTSLSLPIFLSTFNPKPHQFLRLRSSSTP-----NILSRRPALLVLNPLRQNSARGNSIRRLH-ATSEQTLASESAALV-EKSQEIT-SSGDDGV
        MA+T S SLSLPI LS+ N  P     LRSSS+P       LS RP L +LNPLRQN  +  S   +H ATSEQTLAS+SAALV EKSQ+I  S+ DDGV
Subjt:  MATTISTSLSLPIFLSTFNPKPHQFLRLRSSSTP-----NILSRRPALLVLNPLRQNSARGNSIRRLH-ATSEQTLASESAALV-EKSQEIT-SSGDDGV

Query:  STIISALLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEETAKNKKSGKKKKVRARAGPRGFGQKIEEEEQD
        STIIS LLF+AFIGLSILTIGVIYI VTDFLQKREKEKFEKEE  K KKSGKKKKVRAR GPRGFGQK+EEEE D
Subjt:  STIISALLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEETAKNKKSGKKKKVRARAGPRGFGQKIEEEEQD

A0A5A7V864 Uncharacterized protein

2.1e-43

70.86

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Query:  MATTISTSLSLPIFLSTFNPKPHQFLRLRSSSTP-----NILSRRPALLVLNPLRQNSARGNSIRRLH-ATSEQTLASESAALV-EKSQEIT-SSGDDGV
        MA+T S SLSLPI LS+ N  P     LRSSS+P       LS RP L +LNPLRQN  +  S   +H ATSEQTLAS+SAALV EKSQ+I  S+ DDGV
Subjt:  MATTISTSLSLPIFLSTFNPKPHQFLRLRSSSTP-----NILSRRPALLVLNPLRQNSARGNSIRRLH-ATSEQTLASESAALV-EKSQEIT-SSGDDGV

Query:  STIISALLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEETAKNKKSGKKKKVRARAGPRGFGQKIEEEEQD
        STIIS LLF+AFIGLSILTIGVIYI VTDFLQKREKEKFEKEE  K KKSGKKKKVRAR GPRGFGQK+EEEE D
Subjt:  STIISALLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEETAKNKKSGKKKKVRARAGPRGFGQKIEEEEQD

A0A6J1D484 uncharacterized protein LOC111017113

2.1e-75

99.4

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Query:  MATTISTSLSLPIFLSTFNPKPHQFLRLRSSSTPNILSRRPALLVLNPLRQNSARGNSIRRLHATSEQTLASESAALVEKSQEITSSGDDGVSTIISALL
        MATTISTSLSLPIFLSTFNPKPHQFLRLRSSSTPNILSRRPALLVLNPLRQNSARGNSIRRLHATSEQTLASESAALVEKSQEITSSGDDGVSTIISALL
Subjt:  MATTISTSLSLPIFLSTFNPKPHQFLRLRSSSTPNILSRRPALLVLNPLRQNSARGNSIRRLHATSEQTLASESAALVEKSQEITSSGDDGVSTIISALL

Query:  FVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEETAKNKKSGKKKKVRARAGPRGFGQKIEEEEQ
        FVAFIGLSILTIGVIYIAVTDFLQKREKEKFEK ETAKNKKSGKKKKVRARAGPRGFGQKIEEEEQ
Subjt:  FVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEETAKNKKSGKKKKVRARAGPRGFGQKIEEEEQ

A0A6J1G6G9 uncharacterized protein LOC111451198

1.3e-48

75.44

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Query:  MATTISTSLSLPIFLSTFNPKPHQFLRLRSSSTPNI----LSRRPALLVLNPLRQNSARGNSIRRLHATSEQTLASESAALVEKSQEITSSGDDGVSTII
        MATT STSLSLPIFLS+ NP  ++   LRSSS        LSRRPA LV   L QN  R  SIRRLHA SE+TLASESAALVEKSQEI S+GDDGVSTII
Subjt:  MATTISTSLSLPIFLSTFNPKPHQFLRLRSSSTPNI----LSRRPALLVLNPLRQNSARGNSIRRLHATSEQTLASESAALVEKSQEITSSGDDGVSTII

Query:  SALLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEETAKNKKSGKKK--KVRARAGPRGFGQKIEEEE
        S LLFVAF+GLS+LTIGVIYIAVTDFLQKREKEKFEKEE A NKKSGKKK  KV+A+AGPRGFGQK+E+EE
Subjt:  SALLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEETAKNKKSGKKK--KVRARAGPRGFGQKIEEEE

A0A6J1L1T3 uncharacterized protein LOC111499635

3.2e-47

74.27

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Query:  MATTISTSLSLPIFLSTFNPKPHQFLRLRSSSTPNI----LSRRPALLVLNPLRQNSARGNSIRRLHATSEQTLASESAALVEKSQEITSSGDDGVSTII
        MATT STSLSLPI LS+ NP  ++   LRSSS        LSRRPA LV   L QN  R  SIRRLHA SE+TLASESAALVEKSQEI S+GDDGVSTII
Subjt:  MATTISTSLSLPIFLSTFNPKPHQFLRLRSSSTPNI----LSRRPALLVLNPLRQNSARGNSIRRLHATSEQTLASESAALVEKSQEITSSGDDGVSTII

Query:  SALLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEETAKNKKSGKKK--KVRARAGPRGFGQKIEEEE
        S LLFVAF+GLS+LTIGVIYIAVTDFLQKREKEKFEKEE A NKKSGKKK  KV+A+ GPRGFGQK+E+EE
Subjt:  SALLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEETAKNKKSGKKK--KVRARAGPRGFGQKIEEEE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G29180.1 unknown protein

6.0e-22

46.55

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Query:  MATTISTSLSLPIFLSTFNP--KPHQFLRLRSSSTPNILSRRPALLVLNPLRQNSARGNSIRRLHAT----SEQTLASESAALVEKSQEITSSGDDGVST
        M+ T + SLSL  F   F    K H    L  S     +SRR  +L    LR +  +   + R+ AT    S++ ++S+S++       ++S G DGV+ 
Subjt:  MATTISTSLSLPIFLSTFNP--KPHQFLRLRSSSTPNILSRRPALLVLNPLRQNSARGNSIRRLHAT----SEQTLASESAALVEKSQEITSSGDDGVST

Query:  IISALLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEETA-KNKKSGKKKKVRARAGPRGFGQKIEEEEQD
        II  LLFVAF+ L++LTIGV+YI VT+FL KRE+EKFEK+E A K+KK GKKK +RARAGPRGFGQKIE+++ D
Subjt:  IISALLFVAFIGLSILTIGVIYIAVTDFLQKREKEKFEKEETA-KNKKSGKKKKVRARAGPRGFGQKIEEEEQD

Sequences

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CDS sequence

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ATGGCCACCACCATATCCACTTCTCTATCTCTACCAATTTTCCTCTCTACTTTCAATCCAAAGCCTCACCAGTTTCTTCGTCTTCGTAGCTCATCTACACCAAACATTCT
CTCTCGCCGACCAGCACTTCTCGTTCTGAATCCACTTCGCCAAAATTCTGCAAGAGGAAACTCAATTCGGAGGCTCCATGCCACTTCTGAACAAACTCTGGCCTCCGAAT
CCGCCGCGCTGGTGGAGAAATCGCAGGAGATAACATCCAGCGGCGACGACGGCGTATCCACCATCATTTCCGCTCTTCTTTTTGTCGCTTTCATCGGTCTATCTATTCTC
ACAATCGGGGTAATCTACATTGCAGTTACGGACTTCTTGCAGAAGAGAGAGAAGGAAAAGTTTGAGAAAGAGGAGACGGCTAAGAACAAAAAGAGTGGGAAAAAGAAGAA
GGTGAGAGCTAGAGCTGGACCGAGGGGATTCGGCCAGAAGATTGAAGAAGAAGAACAGGAC

mRNA sequence

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Protein sequence

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MATTISTSLSLPIFLSTFNPKPHQFLRLRSSSTPNILSRRPALLVLNPLRQNSARGNSIRRLHATSEQTLASESAALVEKSQEITSSGDDGVSTIISALLFVAFIGLSIL
TIGVIYIAVTDFLQKREKEKFEKEETAKNKKSGKKKKVRARAGPRGFGQKIEEEEQD

MS014247 (gene) of Bitter gourd (TR) v1 genome