CuGenDBv2

Gene ID	MS014256
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Rab5-interacting
Genome location	scaffold5:1692432..1693900
RNA-Seq Expression	MS014256
Synteny	MS014256
Gene Ontology terms	GO:0006996 - organelle organization (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010742 - Rab5-interacting protein IPR029008 - Rab5-interacting protein family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008464121.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]

1.3e-63

94.57

Show/hide

Query:  MKEAKPVKFNIHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGG
        MKEAKPVKFN+HQHQ+HQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWF+IFL ISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNIHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWTLVYSLAHF
        HGALLQEGLFASITLFLLAW LVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWTLVYSLAHF

XP_022148492.1 uncharacterized protein C20orf24 homolog [Momordica charantia]

3.2e-65

98.45

Show/hide

Query:  MKEAKPVKFNIHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGG
        MKEAKPVKFN+HQHQEHQNGHLAPFKLAKLFD EASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNIHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWTLVYSLAHF
        HGALLQEGLFASITLFLLAWTLVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWTLVYSLAHF

XP_022947918.1 uncharacterized protein C20orf24 homolog isoform X2 [Cucurbita moschata]

1.0e-63

94.57

Show/hide

Query:  MKEAKPVKFNIHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGG
        MKEA PVKFN+HQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWG+IPLVGGIWF+IFL ISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNIHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWTLVYSLAHF
        HGALLQEGLFASITLFLLAW LVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWTLVYSLAHF

XP_023532324.1 uncharacterized protein C20orf24 homolog isoform X2 [Cucurbita pepo subsp. pepo]

1.3e-63

93.8

Show/hide

Query:  MKEAKPVKFNIHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGG
        MKEA PVKFN+HQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWG+IPLVGGIWF+IFL ISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNIHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWTLVYSLAHF
        HGALLQEGLFASITLFLLAW L+YSLAHF
Subjt:  HGALLQEGLFASITLFLLAWTLVYSLAHF

XP_038900616.1 respirasome Complex Assembly Factor 1-like [Benincasa hispida]

6.0e-64

94.57

Show/hide

Query:  MKEAKPVKFNIHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGG
        MKE+KPVKFN+HQHQ+HQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWF+IFL ISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNIHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWTLVYSLAHF
        HGALLQEGLFASITLFLLAW LVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWTLVYSLAHF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KFE5 Uncharacterized protein

8.4e-64

93.8

Show/hide

Query:  MKEAKPVKFNIHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGG
        MKEAKPVKFN+HQHQ+HQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAV+LGLLWGSIPLVGGIWF+IFL ISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNIHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWTLVYSLAHF
        HGALLQEGLFASITLFLLAW LVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWTLVYSLAHF

A0A1S4E4J0 uncharacterized protein C20orf24 homolog

6.4e-64

94.57

Show/hide

Query:  MKEAKPVKFNIHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGG
        MKEAKPVKFN+HQHQ+HQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWF+IFL ISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNIHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWTLVYSLAHF
        HGALLQEGLFASITLFLLAW LVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWTLVYSLAHF

A0A5D3DK85 Rab5-interacting

6.4e-64

94.57

Show/hide

Query:  MKEAKPVKFNIHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGG
        MKEAKPVKFN+HQHQ+HQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWF+IFL ISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNIHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWTLVYSLAHF
        HGALLQEGLFASITLFLLAW LVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWTLVYSLAHF

A0A6J1D489 uncharacterized protein C20orf24 homolog

1.5e-65

98.45

Show/hide

Query:  MKEAKPVKFNIHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGG
        MKEAKPVKFN+HQHQEHQNGHLAPFKLAKLFD EASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNIHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWTLVYSLAHF
        HGALLQEGLFASITLFLLAWTLVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWTLVYSLAHF

A0A6J1G7Y2 uncharacterized protein C20orf24 homolog isoform X2

4.9e-64

94.57

Show/hide

Query:  MKEAKPVKFNIHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGG
        MKEA PVKFN+HQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWG+IPLVGGIWF+IFL ISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNIHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWTLVYSLAHF
        HGALLQEGLFASITLFLLAW LVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWTLVYSLAHF

SwissProt top hits

e value

%identity

Alignment

Q9BUV8 Respirasome Complex Assembly Factor 1

2.4e-15

37.84

Show/hide

Query:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
        NG L     +K+   +A+W DKD+  DV++W RQ +AVVLG++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG   L +EG   S  LF+
Subjt:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL

Query:  LAWTLVYSLAH
        +     ++  H
Subjt:  LAWTLVYSLAH

Q9CQT9 Respirasome Complex Assembly Factor 1

1.1e-17

38.39

Show/hide

Query:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
        NG L     +K+   +A+W DKD+  DV++W RQ +A+VLG++WG +PL G +    F +I+  ++Y Y++  L++DEEE+GG   L +EG   S  LF+
Subjt:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL

Query:  LAWTLVYSLAHF
        + W + Y+  H+
Subjt:  LAWTLVYSLAHF

Arabidopsis top hits

e value

%identity

Alignment

AT2G29020.1 Rab5-interacting family protein

4.9e-48

68.42

Show/hide

Query:  MKEAKPVKFNIHQHQE----HQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEE
        MKE K  K +  Q Q     HQN HL  F  AKLFD EASWDKDQLGDVLHWIRQ V ++ GLLWG+IPLVGGIW ++FL IS+ IVYGYYA++LK+DEE
Subjt:  MKEAKPVKFNIHQHQE----HQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEE

Query:  EFGGHGALLQEGLFASITLFLLAWTLVYSLAHF
        +FGGH ALLQ+GLFAS++LFLLAW LVYSL+ F
Subjt:  EFGGHGALLQEGLFASITLFLLAWTLVYSLAHF

AT5G59410.1 Rab5-interacting family protein

7.0e-55

78.46

Show/hide

Query:  MKEAKPVKFN-IHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFG
        MKE+K  K N + Q + HQN HL+P KLAKLFDP+ASWDKDQLGDVLHWIRQ V ++ GLLWGSIPLVGGIW I+FL IS+ IVYGYYAMILKVDEE+FG
Subjt:  MKEAKPVKFN-IHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFG

Query:  GHGALLQEGLFASITLFLLAWTLVYSLAHF
        GH ALLQEGLFAS+TLFLLAW LVYSLAHF
Subjt:  GHGALLQEGLFASITLFLLAWTLVYSLAHF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAGGAAGCGAAACCGGTTAAGTTCAATATTCATCAGCATCAAGAGCACCAAAACGGTCACTTGGCCCCGTTCAAGCTCGCCAAATTGTTCGATCCAGAGGCTTCCTG
GGACAAGGACCAATTAGGAGATGTCTTGCACTGGATTCGACAAGCAGTGGCCGTTGTACTCGGACTGCTGTGGGGCTCCATACCTTTGGTTGGAGGCATATGGTTTATAA
TTTTTCTGGTGATATCAACCAGCATTGTGTATGGATACTATGCAATGATTTTAAAAGTTGATGAAGAAGAATTTGGAGGTCATGGAGCTCTCCTCCAAGAAGGGCTTTTT
GCTTCTATAACTCTATTTCTGCTTGCTTGGACTCTCGTATACAGCTTGGCACACTTC

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MKEAKPVKFNIHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFIIFLVISTSIVYGYYAMILKVDEEEFGGHGALLQEGLF
ASITLFLLAWTLVYSLAHF

MS014256 (gene) of Bitter gourd (TR) v1 genome