CuGenDBv2

Gene ID	MS014261
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	CCHC-type domain-containing protein
Genome location	scaffold5:1737938..1738882
RNA-Seq Expression	MS014261
Synteny	MS014261
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7010551.1 CAX-interacting protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.9e-141

94.34

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Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK+SAQ NT SSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGK--GKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSLKRKDDLVDDGSGSDSREK
        RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGK  GKGAVESDEESEE+ESESSDSD DSEIERIIAER GK+TS KKRSLKRKDDLVDDGSGSDSREK
Subjt:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGK--GKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSLKRKDDLVDDGSGSDSREK

Query:  KRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK-ASLTDSEASSSDDTRG
        KRGRSKRRSRRRES+DSDD+RRKRRKEKHRKRDDSSDEGE +KRRHRKSRKEKRRRRSHRYSDDSDSDTSEESH RHKHKSRK ASLTDSE SSSDDTRG
Subjt:  KRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK-ASLTDSEASSSDDTRG

Query:  RARKRSEKRSRKHRREED
        RARKRSEKRSRKHR EED
Subjt:  RARKRSEKRSRKHRREED

XP_022148397.1 CAX-interacting protein 4 isoform X1 [Momordica charantia]

9.8e-153

99.05

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Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNT SSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSLKRKDDLVDDGSGSDSREKKR
        RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKK SGKKRSLKRKDDLVDDGSGSDSREKKR
Subjt:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSLKRKDDLVDDGSGSDSREKKR

Query:  GRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR
        GRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR
Subjt:  GRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR

Query:  KRSEKRSRKHRREED
        KRSEKRSRKHRRE D
Subjt:  KRSEKRSRKHRREED

XP_022148399.1 CAX-interacting protein 4 isoform X2 [Momordica charantia]

2.2e-152

99.36

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Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNT SSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSLKRKDDLVDDGSGSDSREKKR
        RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKK SGKKRSLKRKDDLVDDGSGSDSREKKR
Subjt:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSLKRKDDLVDDGSGSDSREKKR

Query:  GRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR
        GRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR
Subjt:  GRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR

Query:  KRSEKRSRKHRRE
        KRSEKRSRKHRRE
Subjt:  KRSEKRSRKHRRE

XP_022943818.1 CAX-interacting protein 4 [Cucurbita moschata]

1.2e-139

93.71

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Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK+SAQ NT SSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGK--GKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSLKRKDDLVDDGSGSDSREK
        RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGK  GKGAVESDEESEE+ESESSDSD DSEIERIIAER GK+TS KKRSLKRKDDLVDDGSGSDSREK
Subjt:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGK--GKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSLKRKDDLVDDGSGSDSREK

Query:  KRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK-ASLTDSEASSSDDTRG
        KRGRSKRRSRRRES+DSDD+RRKRRKEKHRKRDDSSDEGE +KRRHRKSRKEKRRRRSHRYSDDSDSDTSEESH RHKHKS+K ASLTDSE SSS DTRG
Subjt:  KRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK-ASLTDSEASSSDDTRG

Query:  RARKRSEKRSRKHRREED
        RARKRSEKRSRKHR EED
Subjt:  RARKRSEKRSRKHRREED

XP_022986903.1 CAX-interacting protein 4 [Cucurbita maxima]

8.1e-139

93.4

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Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK+SAQ NT SSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGK--GKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSLKRKDDLVDDGSGSDSREK
        RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGK  GKGAVESDEESEE+ESESSDSD DSEIERIIAER GK+TS KKRSLKRKDDLVDDGSGSDSREK
Subjt:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGK--GKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSLKRKDDLVDDGSGSDSREK

Query:  KRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK-ASLTDSEASSSDDTRG
        KRGRSKRRSRRRES+DSDDNRRKRRKEKHRKRDDSSDEGEK+KR HRKSRKEKRRRRSHRYSDDSDSDTSEESH RHK K RK ASLTDS+ SSSDD RG
Subjt:  KRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK-ASLTDSEASSSDDTRG

Query:  RARKRSEKRSRKHRREED
        RARKRSEKRSRKHR EED
Subjt:  RARKRSEKRSRKHRREED

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KHA7 CCHC-type domain-containing protein

1.6e-132

90.19

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Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKN+AQ NT SSEP+AENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSLKRKDDLVDDGSGSDSREKKR
        RNFLSVKNDKEKDPEAIQADVMSELDKLKG    GKG VES+EESEE+ESESSDSD DSEIERIIAER GK+ S KKRSLKRKDD VDD SGSDSREKKR
Subjt:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSLKRKDDLVDDGSGSDSREKKR

Query:  GRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK-ASLTDSEASSSDDTRGRA
        GRSKRRS RR+S+DSDD+RRKRRKEKHRKRDDSSDE EK +R HRKSRKEKRRRRSHRYSDDSDSDTSEE+HGRHKHKSRK ASLTDSEASSSDDTRGRA
Subjt:  GRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK-ASLTDSEASSSDDTRGRA

Query:  RKRSEKRSRKHRREED
        RKRSEKRSRKHR E++
Subjt:  RKRSEKRSRKHRREED

A0A6J1D3V6 CAX-interacting protein 4 isoform X2

1.1e-152

99.36

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Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNT SSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSLKRKDDLVDDGSGSDSREKKR
        RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKK SGKKRSLKRKDDLVDDGSGSDSREKKR
Subjt:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSLKRKDDLVDDGSGSDSREKKR

Query:  GRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR
        GRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR
Subjt:  GRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR

Query:  KRSEKRSRKHRRE
        KRSEKRSRKHRRE
Subjt:  KRSEKRSRKHRRE

A0A6J1D3Z8 CAX-interacting protein 4 isoform X1

4.8e-153

99.05

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Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNT SSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSLKRKDDLVDDGSGSDSREKKR
        RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKK SGKKRSLKRKDDLVDDGSGSDSREKKR
Subjt:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSLKRKDDLVDDGSGSDSREKKR

Query:  GRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR
        GRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR
Subjt:  GRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR

Query:  KRSEKRSRKHRREED
        KRSEKRSRKHRRE D
Subjt:  KRSEKRSRKHRREED

A0A6J1FXE5 CAX-interacting protein 4

6.0e-140

93.71

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Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK+SAQ NT SSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGK--GKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSLKRKDDLVDDGSGSDSREK
        RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGK  GKGAVESDEESEE+ESESSDSD DSEIERIIAER GK+TS KKRSLKRKDDLVDDGSGSDSREK
Subjt:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGK--GKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSLKRKDDLVDDGSGSDSREK

Query:  KRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK-ASLTDSEASSSDDTRG
        KRGRSKRRSRRRES+DSDD+RRKRRKEKHRKRDDSSDEGE +KRRHRKSRKEKRRRRSHRYSDDSDSDTSEESH RHKHKS+K ASLTDSE SSS DTRG
Subjt:  KRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK-ASLTDSEASSSDDTRG

Query:  RARKRSEKRSRKHRREED
        RARKRSEKRSRKHR EED
Subjt:  RARKRSEKRSRKHRREED

A0A6J1JHW4 CAX-interacting protein 4

3.9e-139

93.4

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Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK+SAQ NT SSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQC

Query:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGK--GKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSLKRKDDLVDDGSGSDSREK
        RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGK  GKGAVESDEESEE+ESESSDSD DSEIERIIAER GK+TS KKRSLKRKDDLVDDGSGSDSREK
Subjt:  RNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGK--GKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSLKRKDDLVDDGSGSDSREK

Query:  KRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK-ASLTDSEASSSDDTRG
        KRGRSKRRSRRRES+DSDDNRRKRRKEKHRKRDDSSDEGEK+KR HRKSRKEKRRRRSHRYSDDSDSDTSEESH RHK K RK ASLTDS+ SSSDD RG
Subjt:  KRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK-ASLTDSEASSSDDTRG

Query:  RARKRSEKRSRKHRREED
        RARKRSEKRSRKHR EED
Subjt:  RARKRSEKRSRKHRREED

SwissProt top hits

e value

%identity

Alignment

Q84Y18 CAX-interacting protein 4

2.6e-71

59.12

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPE-AENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQ
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAP   +     +P TT  + E  EN+YASFQGLLALARITGSN +E RG+CK+CGRVGHL+FQ
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPE-AENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQ

Query:  CRNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSG----KKRSLKRKDDLVDDGSGSDS
        CRNFLS K DKEKDP AI+A V+S L+K++  +GKG+  VE     EE+ESESSDSDVDSE+ERIIAER GKK  G    K  S+++K   V D S SDS
Subjt:  CRNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSG----KKRSLKRKDDLVDDGSGSDS

Query:  -----REKKRGRSKRRSRRR----ESDDSDDNRRKRRKEKH-RKRD-DSSDEGEKL--KRRHRKSRKEKRRRRSHR-YSDDSDSDTSEESHGRHKHKSRK
             + ++R   KR S +R    ES+D ++ R KRRKE+  RKRD D SDE E    +R  RKSRKEKRRRRS R +SDDSDS++SE+   R K +++ 
Subjt:  -----REKKRGRSKRRSRRR----ESDDSDDNRRKRRKEKH-RKRD-DSSDEGEKL--KRRHRKSRKEKRRRRSHR-YSDDSDSDTSEESHGRHKHKSRK

Query:  ASLTDSEASSSDDTRGR----ARKRSEKRSRK--HRREED
        A+ +DSEA+ S D   R    + KRSEK+SRK  HR+E +
Subjt:  ASLTDSEASSSDDTRGR----ARKRSEKRSRK--HRREED

Arabidopsis top hits

e value

%identity

Alignment

AT2G28910.1 CAX interacting protein 4

1.8e-72

59.12

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPE-AENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQ
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAP   +     +P TT  + E  EN+YASFQGLLALARITGSN +E RG+CK+CGRVGHL+FQ
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPE-AENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQ

Query:  CRNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSG----KKRSLKRKDDLVDDGSGSDS
        CRNFLS K DKEKDP AI+A V+S L+K++  +GKG+  VE     EE+ESESSDSDVDSE+ERIIAER GKK  G    K  S+++K   V D S SDS
Subjt:  CRNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSG----KKRSLKRKDDLVDDGSGSDS

Query:  -----REKKRGRSKRRSRRR----ESDDSDDNRRKRRKEKH-RKRD-DSSDEGEKL--KRRHRKSRKEKRRRRSHR-YSDDSDSDTSEESHGRHKHKSRK
             + ++R   KR S +R    ES+D ++ R KRRKE+  RKRD D SDE E    +R  RKSRKEKRRRRS R +SDDSDS++SE+   R K +++ 
Subjt:  -----REKKRGRSKRRSRRR----ESDDSDDNRRKRRKEKH-RKRD-DSSDEGEKL--KRRHRKSRKEKRRRRSHR-YSDDSDSDTSEESHGRHKHKSRK

Query:  ASLTDSEASSSDDTRGR----ARKRSEKRSRK--HRREED
        A+ +DSEA+ S D   R    + KRSEK+SRK  HR+E +
Subjt:  ASLTDSEASSSDDTRGR----ARKRSEKRSRK--HRREED

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCAGCCACAGCTGGAAGAGTTCGCATGCCTGCGAACAATAGGGTACATAGTAGTGCTGCCCTACAAACGCATGGTATATGGCAGAGTGCAATTGGGTATGATCCATA
TGCACCCAACAAGGATGATAACAAGAATTCTGCACAACCAAACACGACTAGCTCTGAGCCAGAAGCAGAGAATGCATATGCAAGCTTTCAGGGTCTTCTTGCACTTGCTC
GCATAACTGGTTCCAATGCCAATGAGGTTCGCGGTGCTTGCAAGAGATGTGGACGTGTTGGACACCTTAGCTTTCAGTGCAGGAATTTCTTGAGTGTTAAGAATGATAAG
GAGAAAGACCCAGAGGCTATCCAGGCTGATGTTATGTCTGAGCTGGATAAATTAAAAGGAAACATAGGTAAGGGGAAAGGTGCAGTTGAGAGTGATGAGGAAAGTGAGGA
GGATGAGAGTGAAAGTTCTGACTCGGATGTCGATTCAGAGATTGAAAGGATTATTGCTGAAAGGGGAGGGAAAAAAACGAGTGGTAAGAAAAGATCATTGAAAAGAAAGG
ATGATTTGGTTGATGATGGATCAGGTTCAGATTCGAGAGAGAAGAAGAGGGGGAGGTCAAAAAGGAGGAGCCGAAGAAGAGAATCTGATGATTCAGATGACAACAGAAGG
AAGAGGAGAAAGGAGAAGCACAGGAAAAGAGATGACTCATCGGATGAGGGTGAAAAACTTAAGCGACGTCATAGGAAGAGTAGAAAAGAGAAGAGAAGGAGAAGAAGCCA
TAGGTATTCTGATGACTCTGATTCTGATACATCTGAGGAATCTCATGGAAGGCACAAACACAAGAGTAGAAAGGCATCATTAACTGATTCTGAAGCTAGCAGCTCTGATG
ATACAAGGGGCAGGGCAAGGAAGCGCTCTGAGAAGAGGAGTAGGAAACACCGTCGAGAGGAGGAT

mRNA sequence

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Protein sequence

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MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDK
EKDPEAIQADVMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSLKRKDDLVDDGSGSDSREKKRGRSKRRSRRRESDDSDDNRR
KRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRARKRSEKRSRKHRREED

MS014261 (gene) of Bitter gourd (TR) v1 genome