CuGenDBv2

Gene ID	MS014265
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Actin
Genome location	scaffold5:1767464..1768076
RNA-Seq Expression	MS014265
Synteny	MS014265
Gene Ontology terms	GO:0005856 - cytoskeleton (cellular component) GO:0005524 - ATP binding (molecular function)
InterPro domains	IPR004000 - Actin family IPR004001 - Actin, conserved site IPR043129 - ATPase, nucleotide binding domain

Homology

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GenBank top hits

e value

%identity

Alignment

CAN69147.1 hypothetical protein VITISV_023982 [Vitis vinifera]

2.0e-64

100

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Query:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
        ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
Subjt:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF

Query:  QQMWIAKAEYDESGPSIVHRKCF
        QQMWIAKAEYDESGPSIVHRKCF
Subjt:  QQMWIAKAEYDESGPSIVHRKCF

KAG8367948.1 hypothetical protein BUALT_Bualt16G0125700 [Buddleja alternifolia]

2.0e-64

100

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Query:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
        ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
Subjt:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF

Query:  QQMWIAKAEYDESGPSIVHRKCF
        QQMWIAKAEYDESGPSIVHRKCF
Subjt:  QQMWIAKAEYDESGPSIVHRKCF

XP_004304361.1 PREDICTED: actin-like [Fragaria vesca subsp. vesca]

2.0e-64

100

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Query:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
        ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
Subjt:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF

Query:  QQMWIAKAEYDESGPSIVHRKCF
        QQMWIAKAEYDESGPSIVHRKCF
Subjt:  QQMWIAKAEYDESGPSIVHRKCF

XP_008241048.1 PREDICTED: actin [Prunus mume]

2.0e-64

100

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Query:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
        ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
Subjt:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF

Query:  QQMWIAKAEYDESGPSIVHRKCF
        QQMWIAKAEYDESGPSIVHRKCF
Subjt:  QQMWIAKAEYDESGPSIVHRKCF

XP_020272727.1 actin-66-like [Asparagus officinalis]

2.0e-64

100

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Query:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
        ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
Subjt:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF

Query:  QQMWIAKAEYDESGPSIVHRKCF
        QQMWIAKAEYDESGPSIVHRKCF
Subjt:  QQMWIAKAEYDESGPSIVHRKCF

TrEMBL top hits

e value

%identity

Alignment

A0A1U7WH08 actin

9.5e-65

100

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Query:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
        ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
Subjt:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF

Query:  QQMWIAKAEYDESGPSIVHRKCF
        QQMWIAKAEYDESGPSIVHRKCF
Subjt:  QQMWIAKAEYDESGPSIVHRKCF

A0A4Y7L409 Uncharacterized protein

9.5e-65

100

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Query:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
        ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
Subjt:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF

Query:  QQMWIAKAEYDESGPSIVHRKCF
        QQMWIAKAEYDESGPSIVHRKCF
Subjt:  QQMWIAKAEYDESGPSIVHRKCF

M5VWV3 Uncharacterized protein

9.5e-65

100

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Query:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
        ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
Subjt:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF

Query:  QQMWIAKAEYDESGPSIVHRKCF
        QQMWIAKAEYDESGPSIVHRKCF
Subjt:  QQMWIAKAEYDESGPSIVHRKCF

M5VYQ8 Uncharacterized protein

9.5e-65

100

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Query:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
        ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
Subjt:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF

Query:  QQMWIAKAEYDESGPSIVHRKCF
        QQMWIAKAEYDESGPSIVHRKCF
Subjt:  QQMWIAKAEYDESGPSIVHRKCF

M5XJX2 Uncharacterized protein

9.5e-65

100

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Query:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
        ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
Subjt:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF

Query:  QQMWIAKAEYDESGPSIVHRKCF
        QQMWIAKAEYDESGPSIVHRKCF
Subjt:  QQMWIAKAEYDESGPSIVHRKCF

SwissProt top hits

e value

%identity

Alignment

A2XLF2 Actin-1

2.2e-66

98.37

Show/hide

Query:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
        ERFRCPEVLFQPS IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
Subjt:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF

Query:  QQMWIAKAEYDESGPSIVHRKCF
        QQMWIAKAEYDESGPSIVHRKCF
Subjt:  QQMWIAKAEYDESGPSIVHRKCF

O81221 Actin

5.7e-67

99.19

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Query:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
        ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
Subjt:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF

Query:  QQMWIAKAEYDESGPSIVHRKCF
        QQMWIAKAEYDESGPSIVHRKCF
Subjt:  QQMWIAKAEYDESGPSIVHRKCF

P30171 Actin-97

5.7e-67

99.19

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Query:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
        ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
Subjt:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF

Query:  QQMWIAKAEYDESGPSIVHRKCF
        QQMWIAKAEYDESGPSIVHRKCF
Subjt:  QQMWIAKAEYDESGPSIVHRKCF

P53496 Actin-11

1.7e-66

97.56

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Query:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
        ERFRCPEVLFQPS++GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
Subjt:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF

Query:  QQMWIAKAEYDESGPSIVHRKCF
        QQMWIAKAEYDESGPSIVHRKCF
Subjt:  QQMWIAKAEYDESGPSIVHRKCF

Q05214 Actin

1.3e-66

99.19

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Query:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
        ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYG IVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
Subjt:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF

Query:  QQMWIAKAEYDESGPSIVHRKCF
        QQMWIAKAEYDESGPSIVHRKCF
Subjt:  QQMWIAKAEYDESGPSIVHRKCF

Arabidopsis top hits

e value

%identity

Alignment

AT2G37620.1 actin 1

4.5e-67

97.56

Show/hide

Query:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
        ERFRCPEVL+QPSMIGME AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
Subjt:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF

Query:  QQMWIAKAEYDESGPSIVHRKCF
        QQMWIAKAEYDESGPSIVHRKCF
Subjt:  QQMWIAKAEYDESGPSIVHRKCF

AT2G37620.2 actin 1

4.5e-67

97.56

Show/hide

Query:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
        ERFRCPEVL+QPSMIGME AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
Subjt:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF

Query:  QQMWIAKAEYDESGPSIVHRKCF
        QQMWIAKAEYDESGPSIVHRKCF
Subjt:  QQMWIAKAEYDESGPSIVHRKCF

AT3G12110.1 actin-11

1.2e-67

97.56

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Query:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
        ERFRCPEVLFQPS++GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
Subjt:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF

Query:  QQMWIAKAEYDESGPSIVHRKCF
        QQMWIAKAEYDESGPSIVHRKCF
Subjt:  QQMWIAKAEYDESGPSIVHRKCF

AT3G53750.1 actin 3

4.5e-67

97.56

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Query:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
        ERFRCPEVL+QPSMIGME AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
Subjt:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF

Query:  QQMWIAKAEYDESGPSIVHRKCF
        QQMWIAKAEYDESGPSIVHRKCF
Subjt:  QQMWIAKAEYDESGPSIVHRKCF

AT5G09810.1 actin 7

7.6e-67

96.75

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Query:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
        ERFRCPEVLFQPS+IGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF
Subjt:  ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTF

Query:  QQMWIAKAEYDESGPSIVHRKCF
        QQMWI+K+EYDESGPSIVHRKCF
Subjt:  QQMWIAKAEYDESGPSIVHRKCF

Sequences

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CDS sequence

Show/hide CDS sequence

GAACGTTTTCGCTGTCCTGAAGTTCTTTTCCAGCCTTCAATGATTGGAATGGAAGCTGCAGGCATCCACGAAACAACATATAACTCCATCATGAAATGTGATGTCGACAT
CAGAAAGGATTTGTATGGAAACATTGTTCTTAGTGGTGGATCAACCATGTTCCCAGGCATTGCTGACCGAATGAGCAAAGAAATAACTGCGTTGGCTCCCAGCAGCATGA
AAATAAAAGTGGTAGCACCACCTGAAAGAAAGTACAGTGTCTGGATTGGTGGCTCCATTTTGGCATCACTCAGCACGTTTCAGCAGATGTGGATCGCAAAGGCAGAGTAT
GATGAGTCTGGTCCATCCATTGTGCACAGGAAATGCTTC

mRNA sequence

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Protein sequence

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ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEY
DESGPSIVHRKCF

MS014265 (gene) of Bitter gourd (TR) v1 genome