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MS014288 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014288
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzinc finger protein ZAT12-like
Genome locationscaffold5:1892546..1892812
RNA-Seq ExpressionMS014288
SyntenyMS014288
Gene Ontology termsGO:0010200 - response to chitin (biological process)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647068.1 hypothetical protein Csa_023006 [Cucumis sativus]1.2e-2669.57Show/hide
Query:  VFACKTCNREFSSFQALGGHRASHRKPK---TADLLLQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRNYSPPADAPPAAAALHVDDEES
        VF CKTCNREFSSFQALGGHRASHRKPK   + D L  +  NK K HECSICGVEFPVGQALGGHMRRHRN SPP+ A    A    D+ +S
Subjt:  VFACKTCNREFSSFQALGGHRASHRKPK---TADLLLQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRNYSPPADAPPAAAALHVDDEES

XP_004148235.1 zinc finger protein ZAT18 [Cucumis sativus]1.2e-2669.57Show/hide
Query:  VFACKTCNREFSSFQALGGHRASHRKPK---TADLLLQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRNYSPPADAPPAAAALHVDDEES
        VF CKTCNREFSSFQALGGHRASHRKPK   + D L  +  NK K HECSICGVEFPVGQALGGHMRRHRN SPP+ A    A    D+ +S
Subjt:  VFACKTCNREFSSFQALGGHRASHRKPK---TADLLLQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRNYSPPADAPPAAAALHVDDEES

XP_022944189.1 zinc finger protein ZAT12-like [Cucurbita moschata]8.4e-2575Show/hide
Query:  VFACKTCNREFSSFQALGGHRASHRKPK---TADLLLQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRNYSPPADAPP
        VF CKTCNREFSSFQALGGHRASHRK K   + D L  NA+ K K HECS+CG+EFP+GQALGGHMRRHRN SP AD PP
Subjt:  VFACKTCNREFSSFQALGGHRASHRKPK---TADLLLQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRNYSPPADAPP

XP_022986956.1 zinc finger protein ZAT12-like [Cucurbita maxima]4.9e-2574.68Show/hide
Query:  VFACKTCNREFSSFQALGGHRASHR--KPKTADLLLQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRNYSPPADAPP
        VF CKTCNREFSSFQALGGHRASHR  KP  +   L N   K K HECS+CG+EFP+GQALGGHMRRHRN SPPAD PP
Subjt:  VFACKTCNREFSSFQALGGHRASHR--KPKTADLLLQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRNYSPPADAPP

XP_038902055.1 zinc finger protein ZAT11-like [Benincasa hispida]9.0e-2771.28Show/hide
Query:  VFACKTCNREFSSFQALGGHRASHRKPK----TADLLLQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRNYS-PPADAPPAAAALHVDDEES
        VFACKTCNREFSSFQALGGHRASHRKPK    + D+   N + K K+HECSICGVEFPVGQALGGHMRRHRN S PP D  PA A    DD +S
Subjt:  VFACKTCNREFSSFQALGGHRASHRKPK----TADLLLQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRNYS-PPADAPPAAAALHVDDEES

TrEMBL top hitse value%identityAlignment
A0A0A0KEU7 Uncharacterized protein5.7e-2769.57Show/hide
Query:  VFACKTCNREFSSFQALGGHRASHRKPK---TADLLLQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRNYSPPADAPPAAAALHVDDEES
        VF CKTCNREFSSFQALGGHRASHRKPK   + D L  +  NK K HECSICGVEFPVGQALGGHMRRHRN SPP+ A    A    D+ +S
Subjt:  VFACKTCNREFSSFQALGGHRASHRKPK---TADLLLQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRNYSPPADAPPAAAALHVDDEES

A0A5A7V8C9 Zinc finger protein ZAT115.3e-2577.63Show/hide
Query:  VFACKTCNREFSSFQALGGHRASHRKPK---TADLLLQNAVN-KPKIHECSICGVEFPVGQALGGHMRRHRNYSPP
        VF CKTCNREFSSFQALGGHRASHRKPK   +AD +  ++   K K+HECSICGVEFPVGQALGGHMRRHRN SPP
Subjt:  VFACKTCNREFSSFQALGGHRASHRKPK---TADLLLQNAVN-KPKIHECSICGVEFPVGQALGGHMRRHRNYSPP

A0A6J1FW96 zinc finger protein ZAT12-like4.1e-2575Show/hide
Query:  VFACKTCNREFSSFQALGGHRASHRKPK---TADLLLQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRNYSPPADAPP
        VF CKTCNREFSSFQALGGHRASHRK K   + D L  NA+ K K HECS+CG+EFP+GQALGGHMRRHRN SP AD PP
Subjt:  VFACKTCNREFSSFQALGGHRASHRKPK---TADLLLQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRNYSPPADAPP

A0A6J1G6Z8 zinc finger protein ZAT11-like5.3e-2575.95Show/hide
Query:  VFACKTCNREFSSFQALGGHRASHRKPKTADLLLQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRNYSP-PADAPPA
        VF CKTCNREFSSFQALGGHRASHRKPK      QN   K K HECSICG+EFPVGQALGGHMRRHRN SP P    PA
Subjt:  VFACKTCNREFSSFQALGGHRASHRKPKTADLLLQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRNYSP-PADAPPA

A0A6J1JCR1 zinc finger protein ZAT12-like2.4e-2574.68Show/hide
Query:  VFACKTCNREFSSFQALGGHRASHR--KPKTADLLLQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRNYSPPADAPP
        VF CKTCNREFSSFQALGGHRASHR  KP  +   L N   K K HECS+CG+EFP+GQALGGHMRRHRN SPPAD PP
Subjt:  VFACKTCNREFSSFQALGGHRASHR--KPKTADLLLQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRNYSPPADAPP

SwissProt top hitse value%identityAlignment
Q42410 Zinc finger protein ZAT121.0e-2060.71Show/hide
Query:  VFACKTCNREFSSFQALGGHRASHRKPKTADLLLQNAVNKPKI--HECSICGVEFPVGQALGGHMRRHRNYSPPADAPPAAAAL
        VF CKTC ++F SFQALGGHRASH+KP   D L    + K K   H C ICGVEFP+GQALGGHMRRHRN S  A       AL
Subjt:  VFACKTCNREFSSFQALGGHRASHRKPKTADLLLQNAVNKPKI--HECSICGVEFPVGQALGGHMRRHRNYSPPADAPPAAAAL

Q42453 Zinc finger protein ZAT71.9e-1966.67Show/hide
Query:  VFACKTCNREFSSFQALGGHRASHRKPKTAD--LLLQNAVNK--PKIHECSICGVEFPVGQALGGHMRRHRN
        VF CKTC +EFSSFQALGGHRASH+K   +D   LL +  NK     H C ICGV+FP+GQALGGHMRRHRN
Subjt:  VFACKTCNREFSSFQALGGHRASHRKPKTAD--LLLQNAVNK--PKIHECSICGVEFPVGQALGGHMRRHRN

Q681X4 Zinc finger protein ZAT56.0e-1846.49Show/hide
Query:  VFACKTCNREFSSFQALGGHRASHRKPKTAD--------------------------------LLLQNAVNKP-KIHECSICGVEFPVGQALGGHMRRHR
        V+ CKTCNR FSSFQALGGHRASH+KP+T+                                     N +NK  K+HECSICG EF  GQALGGHMRRHR
Subjt:  VFACKTCNREFSSFQALGGHRASHRKPKTAD--------------------------------LLLQNAVNKP-KIHECSICGVEFPVGQALGGHMRRHR

Query:  NYSPPADAPPAAAA
          +    +P AA A
Subjt:  NYSPPADAPPAAAA

Q9LX85 Zinc finger protein ZAT85.5e-1960.81Show/hide
Query:  VFACKTCNREFSSFQALGGHRASHRK------PKTADLLLQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRN
        VF CKTC +EFSSFQALGGHRASH+K      P     L          H C ICGVEFP+GQALGGHMRRHR+
Subjt:  VFACKTCNREFSSFQALGGHRASHRK------PKTADLLLQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRN

Q9SLD4 Zinc finger protein ZAT111.0e-1761.11Show/hide
Query:  FACKTCNREFSSFQALGGHRASHRKPKTA----DLL-LQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRN
        F CKTCN+ FSSFQALGGHRASH+KPK      D+  L N       H+CSIC   F  GQALGGHMRRHR+
Subjt:  FACKTCNREFSSFQALGGHRASHRKPKTA----DLL-LQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRN

Arabidopsis top hitse value%identityAlignment
AT2G28710.1 C2H2-type zinc finger family protein3.0e-2058.14Show/hide
Query:  VFACKTCNREFSSFQALGGHRASHRKPKTADLLLQNAVN--KPKIHECSICGVEFPVGQALGGHMRRHRNYS--------PPADAP
        VFACKTCN+EF SFQALGGHRASHR+    +     +    KP  HEC ICG EF VGQALGGHMR+HR  S         PA AP
Subjt:  VFACKTCNREFSSFQALGGHRASHRKPKTADLLLQNAVN--KPKIHECSICGVEFPVGQALGGHMRRHRNYS--------PPADAP

AT3G46070.1 C2H2-type zinc finger family protein6.6e-2060.53Show/hide
Query:  VFACKTCNREFSSFQALGGHRASHRKPKTAD--LLLQNAVNKPK------IHECSICGVEFPVGQALGGHMRRHRN
        VF CKTC R+F SFQALGGHRASH K   +D   L  +   KPK       H C ICG+EFP+GQALGGHMR+HRN
Subjt:  VFACKTCNREFSSFQALGGHRASHRKPKTAD--LLLQNAVNKPK------IHECSICGVEFPVGQALGGHMRRHRN

AT3G46080.1 C2H2-type zinc finger family protein3.9e-2060.81Show/hide
Query:  VFACKTCNREFSSFQALGGHRASHRK------PKTADLLLQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRN
        VF CKTC +EFSSFQALGGHRASH+K      P     L          H C ICGVEFP+GQALGGHMRRHR+
Subjt:  VFACKTCNREFSSFQALGGHRASHRK------PKTADLLLQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRN

AT3G46090.1 C2H2 and C2HC zinc fingers superfamily protein1.3e-2066.67Show/hide
Query:  VFACKTCNREFSSFQALGGHRASHRKPKTAD--LLLQNAVNK--PKIHECSICGVEFPVGQALGGHMRRHRN
        VF CKTC +EFSSFQALGGHRASH+K   +D   LL +  NK     H C ICGV+FP+GQALGGHMRRHRN
Subjt:  VFACKTCNREFSSFQALGGHRASHRKPKTAD--LLLQNAVNK--PKIHECSICGVEFPVGQALGGHMRRHRN

AT5G59820.1 C2H2-type zinc finger family protein7.1e-2260.71Show/hide
Query:  VFACKTCNREFSSFQALGGHRASHRKPKTADLLLQNAVNKPKI--HECSICGVEFPVGQALGGHMRRHRNYSPPADAPPAAAAL
        VF CKTC ++F SFQALGGHRASH+KP   D L    + K K   H C ICGVEFP+GQALGGHMRRHRN S  A       AL
Subjt:  VFACKTCNREFSSFQALGGHRASHRKPKTADLLLQNAVNKPKI--HECSICGVEFPVGQALGGHMRRHRNYSPPADAPPAAAAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTTTTGCCTGCAAGACCTGCAACCGGGAGTTTTCGTCGTTCCAGGCCTTGGGAGGCCACAGGGCTTCTCACCGGAAACCCAAAACTGCCGATCTTCTTCTTCAAAATGC
CGTTAATAAGCCCAAGATTCACGAGTGTTCCATTTGCGGAGTCGAGTTCCCCGTCGGCCAGGCGCTCGGCGGCCACATGCGCCGCCATCGGAATTACTCTCCGCCTGCCG
ATGCCCCACCCGCTGCCGCCGCGCTTCACGTCGACGATGAGGAATCA
mRNA sequenceShow/hide mRNA sequence
GTTTTTGCCTGCAAGACCTGCAACCGGGAGTTTTCGTCGTTCCAGGCCTTGGGAGGCCACAGGGCTTCTCACCGGAAACCCAAAACTGCCGATCTTCTTCTTCAAAATGC
CGTTAATAAGCCCAAGATTCACGAGTGTTCCATTTGCGGAGTCGAGTTCCCCGTCGGCCAGGCGCTCGGCGGCCACATGCGCCGCCATCGGAATTACTCTCCGCCTGCCG
ATGCCCCACCCGCTGCCGCCGCGCTTCACGTCGACGATGAGGAATCA
Protein sequenceShow/hide protein sequence
VFACKTCNREFSSFQALGGHRASHRKPKTADLLLQNAVNKPKIHECSICGVEFPVGQALGGHMRRHRNYSPPADAPPAAAALHVDDEES