; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS014294 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014294
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNusB domain-containing protein
Genome locationscaffold2308:37033..41553
RNA-Seq ExpressionMS014294
SyntenyMS014294
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0031564 - transcription antitermination (biological process)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR006027 - NusB/RsmB/TIM44
IPR011605 - NusB antitermination factor
IPR035926 - NusB-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605513.1 hypothetical protein SDJN03_02830, partial [Cucurbita argyrosperma subsp. sororia]2.3e-12685.14Show/hide
Query:  RPNFNLSSHISGICR--FPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV
        RPNF+ SS +SGICR  FP SA VPYVK+SVP LC QASLRASTSF +NSV  ES S+  SS E IPK+DK+GR CSPRAARELALSI+YA+CLEGSDPV
Subjt:  RPNFNLSSHISGICR--FPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV

Query:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP
        RLFEKRLNAR EPGYEFDK SLM YNHMSFGGPPVTVETAEEADELLRKDEKD AIEA ILAAPPK+VYSKLILRF+RKLLVAVVDRWD+HVLKI+ VIP
Subjt:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP

Query:  STWKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREK
        STWK KPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDI+E DST+AR K
Subjt:  STWKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREK

XP_022153810.1 uncharacterized protein LOC111021236 [Momordica charantia]4.4e-14999.27Show/hide
Query:  RPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRL
        RPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRL
Subjt:  RPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRL

Query:  FEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIPST
        FEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIPST
Subjt:  FEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIPST

Query:  WKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREK
        WKSKPAGRILELCILHLAMSEITVVGTR QIVINEA+DLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREK
Subjt:  WKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREK

XP_022948088.1 uncharacterized protein LOC111451776 [Cucurbita moschata]2.8e-12785.51Show/hide
Query:  RPNFNLSSHISGICR--FPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV
        RPNF+ SS +SGICR  FP SA VPYVK+SVPHLC QASLRASTSF +NSV  ES S+  SS E IPK+DK+GR CSPRAARELALSI+YA+CLEGSDPV
Subjt:  RPNFNLSSHISGICR--FPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV

Query:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP
        RLFEKRLNAR EPGYEFDK SLM YNHMSFGGPPVTVETAEEADELLRKDEKD AIEA ILAAPPK+VYSKLILRF+RKLLVAVVDRWD+HVLKI+ VIP
Subjt:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP

Query:  STWKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREK
        STWK KPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDI+E DST+AR K
Subjt:  STWKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREK

XP_023007062.1 uncharacterized protein LOC111499665 [Cucurbita maxima]2.3e-12685.14Show/hide
Query:  RPNFNLSSHISGIC--RFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV
        RPNF+ SSH+SGIC   FP SA VPYVK+SVP LC QASLRASTSF +NSV  ES S+  SS E IPK+DK+GR CSPRAARELALSI+YA+CLEGSDPV
Subjt:  RPNFNLSSHISGIC--RFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV

Query:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP
        RLFEKRLNAR EPGYEFDK SLM YNHMSFGGPPVTVETAEEADELLRKDEKD AIEA ILAAPPK+VYSKLILRF+RKLLVAVVDRWD+HVLKI+ VIP
Subjt:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP

Query:  STWKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREK
        STWK KPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDI+E DST+AR K
Subjt:  STWKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREK

XP_023532267.1 uncharacterized protein LOC111794466 [Cucurbita pepo subsp. pepo]3.1e-12684.78Show/hide
Query:  RPNFNLSSHISGICR--FPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV
        RPNF+ SSH+SGICR  FP SA VPYVK+SVP LC QASLRASTSF +NSV  ES S+  SS E IPK+DK+GR CSPRAARELALSI+YA+CLEGSDPV
Subjt:  RPNFNLSSHISGICR--FPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV

Query:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP
        RLFEKRLNAR EPGYEFDK SLM YNHMSFGGPPVTVETAEEADELLRKDEKD AIEA +LAAPPK+VYSKLILRF+RKLLVAVVDRWD+HVLKI+ VIP
Subjt:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP

Query:  STWKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREK
        STWK KPAGRILEL ILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDI+E DST+AR K
Subjt:  STWKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREK

TrEMBL top hitse value%identityAlignment
A0A1S3BNR2 uncharacterized protein LOC103491638 isoform X12.4e-12483.7Show/hide
Query:  RPNFNLSSHISGICRFP--ASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV
        RPNF+ S+HISGIC+FP  AS+ VP+VK+S+P LC QASLRASTSF EN V  E  SIS SS E IPK+DK+G+ CSPRAARELALSIVYAACLEGSDPV
Subjt:  RPNFNLSSHISGICRFP--ASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV

Query:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP
        RLFEKRLN+RRE GYEFDK SLM YNHMSFGGPPVTVET EEADELLRKDE+D  IEA ILAAPPKMVYSKLILRF+RKLLVAVVD WDN  LKIE VIP
Subjt:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP

Query:  STWKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREK
         TWK+KPAGRILELCILHLAMSEITV+GTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKE DST AREK
Subjt:  STWKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREK

A0A5D3DDJ4 NusB/RsmB/TIM442.4e-12483.7Show/hide
Query:  RPNFNLSSHISGICRFP--ASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV
        RPNF+ S+HISGIC+FP  AS+ VP+VK+S+P LC QASLRASTSF EN V  E  SIS SS E IPK+DK+G+ CSPRAARELALSIVYAACLEGSDPV
Subjt:  RPNFNLSSHISGICRFP--ASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV

Query:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP
        RLFEKRLN+RRE GYEFDK SLM YNHMSFGGPPVTVET EEADELLRKDE+D  IEA ILAAPPKMVYSKLILRF+RKLLVAVVD WDN  LKIE VIP
Subjt:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP

Query:  STWKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREK
         TWK+KPAGRILELCILHLAMSEITV+GTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKE DST AREK
Subjt:  STWKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREK

A0A6J1DHW5 uncharacterized protein LOC1110212362.1e-14999.27Show/hide
Query:  RPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRL
        RPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRL
Subjt:  RPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRL

Query:  FEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIPST
        FEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIPST
Subjt:  FEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIPST

Query:  WKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREK
        WKSKPAGRILELCILHLAMSEITVVGTR QIVINEA+DLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREK
Subjt:  WKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREK

A0A6J1G8E0 uncharacterized protein LOC1114517761.3e-12785.51Show/hide
Query:  RPNFNLSSHISGICR--FPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV
        RPNF+ SS +SGICR  FP SA VPYVK+SVPHLC QASLRASTSF +NSV  ES S+  SS E IPK+DK+GR CSPRAARELALSI+YA+CLEGSDPV
Subjt:  RPNFNLSSHISGICR--FPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV

Query:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP
        RLFEKRLNAR EPGYEFDK SLM YNHMSFGGPPVTVETAEEADELLRKDEKD AIEA ILAAPPK+VYSKLILRF+RKLLVAVVDRWD+HVLKI+ VIP
Subjt:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP

Query:  STWKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREK
        STWK KPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDI+E DST+AR K
Subjt:  STWKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREK

A0A6J1KXJ4 uncharacterized protein LOC1114996651.1e-12685.14Show/hide
Query:  RPNFNLSSHISGIC--RFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV
        RPNF+ SSH+SGIC   FP SA VPYVK+SVP LC QASLRASTSF +NSV  ES S+  SS E IPK+DK+GR CSPRAARELALSI+YA+CLEGSDPV
Subjt:  RPNFNLSSHISGIC--RFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV

Query:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP
        RLFEKRLNAR EPGYEFDK SLM YNHMSFGGPPVTVETAEEADELLRKDEKD AIEA ILAAPPK+VYSKLILRF+RKLLVAVVDRWD+HVLKI+ VIP
Subjt:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP

Query:  STWKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREK
        STWK KPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDI+E DST+AR K
Subjt:  STWKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREK

SwissProt top hitse value%identityAlignment
A6QBK6 Transcription antitermination protein NusB1.8e-0437.35Show/hide
Query:  FSRKLLVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCL
        FS  L    ++  +    +IE  + + W     GR+ E  IL L   EI V  T   I+INEAV+LAK   D  +P+ ING L
Subjt:  FSRKLLVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCL

A7GWZ7 Transcription antitermination protein NusB1.8e-0437.31Show/hide
Query:  KIENVIPSTWKSKPAGR--ILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCL
        +++ ++    K K   R  I+EL IL L + E+   GT   ++INEA++LAK     +AP+ ING L
Subjt:  KIENVIPSTWKSKPAGR--ILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCL

B1WXY6 Transcription antitermination protein NusB1.3e-0534.88Show/hide
Query:  LVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIK
        L+  ++R    + +    +   W+ K   +I +  IL LA++EI  +    ++ INEAV+LAKR+ D    R ING LR F   IK
Subjt:  LVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIK

Q18B61 Transcription antitermination protein NusB7.3e-0637.97Show/hide
Query:  DNHVLKIENVIPSTWKSKPAGRI--LELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDI
        +NH  KI+ +I    K+    R+  +++ IL L++ EI  + T +++ INEAV+LAK +CD  +P+ ING L + V +I
Subjt:  DNHVLKIENVIPSTWKSKPAGRI--LELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDI

Q8GIR7 Transcription antitermination protein NusB1.8e-0452.08Show/hide
Query:  LELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLR
        L+  IL LA +EI  +GT  Q+ INEAV+LA R+ D    R ING LR
Subjt:  LELCILHLAMSEITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLR

Arabidopsis top hitse value%identityAlignment
AT4G26370.1 antitermination NusB domain-containing protein1.7e-8769.26Show/hide
Query:  RASTSFLENSVTGESDSIST---SSKEI----IPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARREPGYEFDKASLMAYNHMSFGGP
        R+S+S L   ++    ++ T   S++E+    +PK+DK+GRL SPRAARELAL I+YAACLEGSDP+RLFEKR+NARREPGYEFDK+SL+ YNHMSFGGP
Subjt:  RASTSFLENSVTGESDSIST---SSKEI----IPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARREPGYEFDKASLMAYNHMSFGGP

Query:  PVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRHQI
        PV  ET EE DEL+R DEK+  IEA +L+APPK+VYSKL+LRF++KLL AVVD+WD+HV+ IE + P  WKS PAGRILE  ILHLAMSE+ V+ TRH I
Subjt:  PVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRHQI

Query:  VINEAVDLAKRFCDGAAPRIINGCLRTFVKD
        VINEAVDLAKRFCDG+APRIINGCLRTFVKD
Subjt:  VINEAVDLAKRFCDGAAPRIINGCLRTFVKD

AT4G26370.2 antitermination NusB domain-containing protein1.8e-3660.94Show/hide
Query:  RASTSFLENSVTGESDSIST---SSKEI----IPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARREPGYEFDKASLMAYNHMSFGGP
        R+S+S L   ++    ++ T   S++E+    +PK+DK+GRL SPRAARELAL I+YAACLEGSDP+RLFEKR+NARREPGYEFDK+SL+ YNHMSFGGP
Subjt:  RASTSFLENSVTGESDSIST---SSKEI----IPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARREPGYEFDKASLMAYNHMSFGGP

Query:  PVTVETAEEADELLRKDEKDFAIEAAIL
        PV  ET EE DEL+R DEK+  I  +++
Subjt:  PVTVETAEEADELLRKDEKDFAIEAAIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGGCCTAATTTTAATCTATCTTCCCACATTTCTGGAATATGCCGGTTTCCGGCTAGCGCAGCCGTTCCGTACGTTAAAGATTCCGTGCCACACCTCTGCGCTCAAGCCTC
GCTTCGCGCTTCTACTTCTTTTCTCGAAAATTCTGTGACTGGAGAGAGCGATTCTATTTCAACTTCTTCCAAAGAAATAATACCCAAGGTCGACAAGACCGGGAGGCTTT
GTAGCCCCAGAGCTGCCAGAGAGCTCGCTTTGTCAATTGTTTATGCAGCTTGTTTAGAAGGCTCCGACCCAGTTCGGCTCTTCGAGAAGCGGTTGAATGCCCGGAGAGAA
CCGGGATATGAATTTGACAAGGCATCATTGATGGCATATAATCATATGAGCTTTGGGGGCCCGCCAGTTACTGTGGAAACAGCTGAAGAGGCAGATGAGCTTTTACGTAA
AGATGAAAAGGATTTTGCAATTGAAGCAGCAATCCTTGCGGCCCCACCAAAGATGGTCTACAGCAAACTCATTTTACGGTTTTCACGCAAACTTTTGGTTGCAGTTGTGG
ACAGATGGGATAATCACGTGCTTAAAATTGAAAATGTCATTCCTTCAACTTGGAAGAGCAAGCCAGCAGGACGGATTCTGGAACTTTGTATTCTTCACCTGGCTATGTCT
GAAATAACGGTTGTTGGAACAAGACATCAGATTGTCATTAACGAGGCCGTTGATCTTGCAAAACGATTCTGTGATGGAGCAGCCCCTCGTATTATTAATGGGTGCCTAAG
GACCTTTGTGAAGGACATTAAAGAAATTGATTCAACTTATGCTCGAGAGAAG
mRNA sequenceShow/hide mRNA sequence
AGGCCTAATTTTAATCTATCTTCCCACATTTCTGGAATATGCCGGTTTCCGGCTAGCGCAGCCGTTCCGTACGTTAAAGATTCCGTGCCACACCTCTGCGCTCAAGCCTC
GCTTCGCGCTTCTACTTCTTTTCTCGAAAATTCTGTGACTGGAGAGAGCGATTCTATTTCAACTTCTTCCAAAGAAATAATACCCAAGGTCGACAAGACCGGGAGGCTTT
GTAGCCCCAGAGCTGCCAGAGAGCTCGCTTTGTCAATTGTTTATGCAGCTTGTTTAGAAGGCTCCGACCCAGTTCGGCTCTTCGAGAAGCGGTTGAATGCCCGGAGAGAA
CCGGGATATGAATTTGACAAGGCATCATTGATGGCATATAATCATATGAGCTTTGGGGGCCCGCCAGTTACTGTGGAAACAGCTGAAGAGGCAGATGAGCTTTTACGTAA
AGATGAAAAGGATTTTGCAATTGAAGCAGCAATCCTTGCGGCCCCACCAAAGATGGTCTACAGCAAACTCATTTTACGGTTTTCACGCAAACTTTTGGTTGCAGTTGTGG
ACAGATGGGATAATCACGTGCTTAAAATTGAAAATGTCATTCCTTCAACTTGGAAGAGCAAGCCAGCAGGACGGATTCTGGAACTTTGTATTCTTCACCTGGCTATGTCT
GAAATAACGGTTGTTGGAACAAGACATCAGATTGTCATTAACGAGGCCGTTGATCTTGCAAAACGATTCTGTGATGGAGCAGCCCCTCGTATTATTAATGGGTGCCTAAG
GACCTTTGTGAAGGACATTAAAGAAATTGATTCAACTTATGCTCGAGAGAAG
Protein sequenceShow/hide protein sequence
RPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVRLFEKRLNARRE
PGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMS
EITVVGTRHQIVINEAVDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREK