; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS014339 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014339
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein RALF-like 32
Genome locationscaffold19:32487..32792
RNA-Seq ExpressionMS014339
SyntenyMS014339
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067637.1 protein RALF-like 32 [Cucumis melo var. makuwa]5.1e-2663.11Show/hide
Query:  LILVLLCLPSFNNVVTVLGNSMTPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGK-GKPYTKSESCLPPPSNPYDRGCKSIYR
        L+L+LL L    ++  V  +S   CNGSIAEC  E+EMLMESEISRRFL Q  +Y+S GALKKD PAC G   G+PYTKS SC PPP+NPYDRGC  IYR
Subjt:  LILVLLCLPSFNNVVTVLGNSMTPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGK-GKPYTKSESCLPPPSNPYDRGCKSIYR

Query:  CKS
        C+S
Subjt:  CKS

XP_004147646.3 protein RALF-like 32 [Cucumis sativus]5.1e-2662.14Show/hide
Query:  LILVLLCLPSFNNVVTVLGNSMTPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGK-GKPYTKSESCLPPPSNPYDRGCKSIYR
        L+L+ L L  F ++  V  +S   CNGSIAEC  EEEMLMESEI+RRFLEQ  +Y+S GALKKD PAC G   G+PYT+S SC PPP+NPY+RGC  IYR
Subjt:  LILVLLCLPSFNNVVTVLGNSMTPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGK-GKPYTKSESCLPPPSNPYDRGCKSIYR

Query:  CKS
        C+S
Subjt:  CKS

XP_022138044.1 protein RALF-like 32 [Momordica charantia]1.2e-4692.16Show/hide
Query:  LILVLLCLPSFNNVVTVLGNSMTPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCKSIYRC
        LILVLLCLPSFNNV TVLGNSMTPCNGSIAECYVEEEMLMESEISRRFLEQ  +Y+SY  LKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCK IYRC
Subjt:  LILVLLCLPSFNNVVTVLGNSMTPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCKSIYRC

Query:  KS
        KS
Subjt:  KS

XP_022138047.1 protein RALF-like 32 [Momordica charantia]2.4e-2876.54Show/hide
Query:  TPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQG-GKGKPYTKSESCLPPPSNPYDRGCKSIYRCKS
        +PCNGSIAEC  E+EMLMESEISRRFLEQ  +Y+S GALKKD+PAC G G+G+PYTKS SC+PPPSNPYDRGC  IYRC+S
Subjt:  TPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQG-GKGKPYTKSESCLPPPSNPYDRGCKSIYRCKS

XP_022138261.1 protein RALF-like 32 [Momordica charantia]1.5e-3880.21Show/hide
Query:  CLPSFNNVVTVLGNSMTPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCKSIYRCKS
        CL SFNN VT++G+SMTPCNGSI+ECY EEE L ESEISRRFLEQ  +Y+SY A KKDQPAC+GGKGKPYT+SESCLPPPSNPYDRGC  IYRCKS
Subjt:  CLPSFNNVVTVLGNSMTPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCKSIYRCKS

TrEMBL top hitse value%identityAlignment
A0A0A0L9A8 Uncharacterized protein1.2e-2561.17Show/hide
Query:  LILVLLCLPSFNNVVTVLGNSMTPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGK-GKPYTKSESCLPPPSNPYDRGCKSIYR
        L+L+ L L  F ++  V  +S   CNGSIA C  EEEMLMESEI+RRFLEQ  +Y+S GALKKD PAC G   G+PYT+S SC PPP+NPY+RGC  IYR
Subjt:  LILVLLCLPSFNNVVTVLGNSMTPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGK-GKPYTKSESCLPPPSNPYDRGCKSIYR

Query:  CKS
        C+S
Subjt:  CKS

A0A5A7VKE5 Protein RALF-like 322.5e-2663.11Show/hide
Query:  LILVLLCLPSFNNVVTVLGNSMTPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGK-GKPYTKSESCLPPPSNPYDRGCKSIYR
        L+L+LL L    ++  V  +S   CNGSIAEC  E+EMLMESEISRRFL Q  +Y+S GALKKD PAC G   G+PYTKS SC PPP+NPYDRGC  IYR
Subjt:  LILVLLCLPSFNNVVTVLGNSMTPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGK-GKPYTKSESCLPPPSNPYDRGCKSIYR

Query:  CKS
        C+S
Subjt:  CKS

A0A6J1C8Z5 protein RALF-like 325.6e-4792.16Show/hide
Query:  LILVLLCLPSFNNVVTVLGNSMTPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCKSIYRC
        LILVLLCLPSFNNV TVLGNSMTPCNGSIAECYVEEEMLMESEISRRFLEQ  +Y+SY  LKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCK IYRC
Subjt:  LILVLLCLPSFNNVVTVLGNSMTPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCKSIYRC

Query:  KS
        KS
Subjt:  KS

A0A6J1C986 protein RALF-like 327.4e-3980.21Show/hide
Query:  CLPSFNNVVTVLGNSMTPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCKSIYRCKS
        CL SFNN VT++G+SMTPCNGSI+ECY EEE L ESEISRRFLEQ  +Y+SY A KKDQPAC+GGKGKPYT+SESCLPPPSNPYDRGC  IYRCKS
Subjt:  CLPSFNNVVTVLGNSMTPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCKSIYRCKS

A0A6J1C9Y4 protein RALF-like 321.2e-2876.54Show/hide
Query:  TPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQG-GKGKPYTKSESCLPPPSNPYDRGCKSIYRCKS
        +PCNGSIAEC  E+EMLMESEISRRFLEQ  +Y+S GALKKD+PAC G G+G+PYTKS SC+PPPSNPYDRGC  IYRC+S
Subjt:  TPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQG-GKGKPYTKSESCLPPPSNPYDRGCKSIYRCKS

SwissProt top hitse value%identityAlignment
O23262 Protein RALF-like 323.4e-1754.35Show/hide
Query:  VTVLGNSMTPCNGSIAEC--YVEEE---MLMESEISRRFLEQPNEYLSYGALKKDQPACQGGK-GKPYTKSESCLPPPSNPYDRGCKSIYRC
        VT   +S + CNGS+AEC   VE E   ++MES  S+R  E+    LSYGAL+++QPAC GGK G+ Y  S  CLPPPSNPY RGC   YRC
Subjt:  VTVLGNSMTPCNGSIAEC--YVEEE---MLMESEISRRFLEQPNEYLSYGALKKDQPACQGGK-GKPYTKSESCLPPPSNPYDRGCKSIYRC

Q2HIM9 Protein RALF-like 311.8e-0540.91Show/hide
Query:  EEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCKSIYRC
        E+E LM +EISRR L     Y+ Y  L++D   CQ    KP      C    +N Y RGC +I RC
Subjt:  EEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCKSIYRC

Q9MA62 Protein RALF-like 221.0e-0844.87Show/hide
Query:  CNGSIAECYV-EEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCKSIYRCK
        C GSIAEC   EEEM  +S+ISRR L Q  +Y+SYGA++++   C   +G  Y   +      +NPY RGC +I RC+
Subjt:  CNGSIAECYV-EEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCKSIYRCK

Q9SRY3 Protein RALF-like 17.7e-0941.67Show/hide
Query:  GNSMTPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCKSIYRCKS
        G++ + C+GSIAEC   EE  M+SEI+RR L    +Y+SY +LK++   C   +G  Y   ++     +NPY RGC  I RC+S
Subjt:  GNSMTPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCKSIYRCKS

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 15.5e-1041.67Show/hide
Query:  GNSMTPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCKSIYRCKS
        G++ + C+GSIAEC   EE  M+SEI+RR L    +Y+SY +LK++   C   +G  Y   ++     +NPY RGC  I RC+S
Subjt:  GNSMTPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCKSIYRCKS

AT2G33775.1 ralf-like 191.5e-0434.34Show/hide
Query:  ILVLLCLPSFNNVVTVLGNSMTPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCKSIYRC
        +L L  +    N    L  S     G I E   E + LM+SE +RR L     Y+SYGAL+K+   C   +G+ Y   +      +NPY RGC  I  C
Subjt:  ILVLLCLPSFNNVVTVLGNSMTPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCKSIYRC

AT3G05490.1 ralf-like 227.1e-1044.87Show/hide
Query:  CNGSIAECYV-EEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCKSIYRCK
        C GSIAEC   EEEM  +S+ISRR L Q  +Y+SYGA++++   C   +G  Y   +      +NPY RGC +I RC+
Subjt:  CNGSIAECYV-EEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCKSIYRCK

AT4G13950.1 ralf-like 311.3e-0640.91Show/hide
Query:  EEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCKSIYRC
        E+E LM +EISRR L     Y+ Y  L++D   CQ    KP      C    +N Y RGC +I RC
Subjt:  EEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCKSIYRC

AT4G14010.1 ralf-like 322.4e-1854.35Show/hide
Query:  VTVLGNSMTPCNGSIAEC--YVEEE---MLMESEISRRFLEQPNEYLSYGALKKDQPACQGGK-GKPYTKSESCLPPPSNPYDRGCKSIYRC
        VT   +S + CNGS+AEC   VE E   ++MES  S+R  E+    LSYGAL+++QPAC GGK G+ Y  S  CLPPPSNPY RGC   YRC
Subjt:  VTVLGNSMTPCNGSIAEC--YVEEE---MLMESEISRRFLEQPNEYLSYGALKKDQPACQGGK-GKPYTKSESCLPPPSNPYDRGCKSIYRC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCATCCTCGTCCTCCTGTGTCTACCGAGTTTCAATAATGTCGTTACTGTACTTGGCAACTCGATGACTCCGTGCAACGGTTCGATAGCAGAGTGCTATGTAGAAGAAGA
GATGTTAATGGAGTCGGAGATAAGTCGGAGGTTTCTTGAACAGCCAAATGAGTACCTATCATACGGTGCTCTGAAGAAGGATCAACCGGCTTGTCAAGGAGGCAAAGGCA
AACCTTATACTAAAAGTGAAAGCTGCCTTCCTCCTCCGTCTAATCCTTATGACAGAGGCTGTAAATCGATATATCGATGCAAGTCT
mRNA sequenceShow/hide mRNA sequence
CTCATCCTCGTCCTCCTGTGTCTACCGAGTTTCAATAATGTCGTTACTGTACTTGGCAACTCGATGACTCCGTGCAACGGTTCGATAGCAGAGTGCTATGTAGAAGAAGA
GATGTTAATGGAGTCGGAGATAAGTCGGAGGTTTCTTGAACAGCCAAATGAGTACCTATCATACGGTGCTCTGAAGAAGGATCAACCGGCTTGTCAAGGAGGCAAAGGCA
AACCTTATACTAAAAGTGAAAGCTGCCTTCCTCCTCCGTCTAATCCTTATGACAGAGGCTGTAAATCGATATATCGATGCAAGTCT
Protein sequenceShow/hide protein sequence
LILVLLCLPSFNNVVTVLGNSMTPCNGSIAECYVEEEMLMESEISRRFLEQPNEYLSYGALKKDQPACQGGKGKPYTKSESCLPPPSNPYDRGCKSIYRCKS