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MS014372 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014372
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description60S ribosomal protein L21-1
Genome locationscaffold19:406704..406817
RNA-Seq ExpressionMS014372
SyntenyMS014372
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001147 - Ribosomal protein L21e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010549095.1 PREDICTED: 60S ribosomal protein L21-1-like [Tarenaya hassleriana]1.0e-0882.05Show/hide
Query:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
        +STK+QPKG KPGFMV+GAT+ET  PIPYDVVNDLKGGY
Subjt:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
XP_016680356.1 60S ribosomal protein L21-1-like isoform X1 [Gossypium hirsutum]1.0e-0882.05Show/hide
Query:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
        +STK+QPKG KPGFMV+GAT+ET  PIPYDVVNDLKGGY
Subjt:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
XP_016680357.1 60S ribosomal protein L21-1-like isoform X2 [Gossypium hirsutum]1.0e-0882.05Show/hide
Query:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
        +STK+QPKG KPGFMV+GAT+ET  PIPYDVVNDLKGGY
Subjt:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
XP_022872012.1 60S ribosomal protein L21-2-like [Olea europaea var. sylvestris]1.0e-0882.05Show/hide
Query:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
        +STK+QPKG KPGFMV+GAT+ET  PIPYDVVNDLKGGY
Subjt:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
XP_030477512.1 60S ribosomal protein L21-1 [Syzygium oleosum]4.7e-0984.62Show/hide
Query:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
        +STK+QPKG KPGFMV+GATMET  PIPYDVVNDLKGGY
Subjt:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
TrEMBL top hitse value%identityAlignment
A0A0D2UZX0 Uncharacterized protein5.1e-0982.05Show/hide
Query:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
        +STK+QPKG KPGFMV+GAT+ET  PIPYDVVNDLKGGY
Subjt:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
A0A0E0K8M2 Uncharacterized protein5.1e-0982.05Show/hide
Query:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
        +STK+QPKG KPGFMV+GAT+ET  PIPYDVVNDLKGGY
Subjt:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
A0A2N9HTU3 Uncharacterized protein5.1e-0982.05Show/hide
Query:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
        +STK+QPKG KPGFMV+GAT+ET  PIPYDVVNDLKGGY
Subjt:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
A0A5D2LC30 Uncharacterized protein5.1e-0982.05Show/hide
Query:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
        +STK+QPKG KPGFMV+GAT+ET  PIPYDVVNDLKGGY
Subjt:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
A0A5D2LCJ8 Uncharacterized protein5.1e-0982.05Show/hide
Query:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
        +STK+QPKG KPGFMV+GAT+ET  PIPYDVVNDLKGGY
Subjt:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
SwissProt top hitse value%identityAlignment
Q43291 60S ribosomal protein L21-15.2e-1179.49Show/hide
Query:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
        +STK+QPKG KPGFMV+G T+ET  PIPYDVVNDLKGGY
Subjt:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
Q9FDZ9 60S ribosomal protein L21-25.2e-1179.49Show/hide
Query:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
        +STK+QPKG KPGFMV+G T+ET  PIPYDVVNDLKGGY
Subjt:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
Arabidopsis top hitse value%identityAlignment
AT1G09590.1 Translation protein SH3-like family protein3.7e-1279.49Show/hide
Query:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
        +STK+QPKG KPGFMV+G T+ET  PIPYDVVNDLKGGY
Subjt:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
AT1G09690.1 Translation protein SH3-like family protein3.7e-1279.49Show/hide
Query:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
        +STK+QPKG KPGFMV+G T+ET  PIPYDVVNDLKGGY
Subjt:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
AT1G57660.1 Translation protein SH3-like family protein3.7e-1279.49Show/hide
Query:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
        +STK+QPKG KPGFMV+G T+ET  PIPYDVVNDLKGGY
Subjt:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
AT1G57860.1 Translation protein SH3-like family protein3.7e-1279.49Show/hide
Query:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY
        +STK+QPKG KPGFMV+G T+ET  PIPYDVVNDLKGGY
Subjt:  LSTKKQPKG-KPGFMVKGATMETNIPIPYDVVNDLKGGY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTAGTACTAAGAAGCAACCAAAAGGCAAGCCAGGGTTTATGGTGAAAGGTGCAACAATGGAGACAAATATTCCTATTCCATATGACGTTGTTAATGATCTCAAGGGTGG
TTAC
mRNA sequenceShow/hide mRNA sequence
CTTAGTACTAAGAAGCAACCAAAAGGCAAGCCAGGGTTTATGGTGAAAGGTGCAACAATGGAGACAAATATTCCTATTCCATATGACGTTGTTAATGATCTCAAGGGTGG
TTAC
Protein sequenceShow/hide protein sequence
LSTKKQPKGKPGFMVKGATMETNIPIPYDVVNDLKGGY