; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS014374 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014374
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRAB GTPase homolog A5D
Genome locationscaffold19:419863..422043
RNA-Seq ExpressionMS014374
SyntenyMS014374
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0012505 - endomembrane system (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR005225 - Small GTP-binding protein domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453919.1 PREDICTED: ras-related protein RABA5d [Cucumis melo]1.1e-11097.25Show/hide
Query:  MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRST
        MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRST
Subjt:  MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRST

Query:  FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV
        FDSVGRWLDELKTHSDTTVA MLVGNKCDLENIRDVTVEEGT LAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV
Subjt:  FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV

Query:  SNGGSKQSESYLSSCCSR
        +NGGSKQSE YL SCCSR
Subjt:  SNGGSKQSESYLSSCCSR

XP_022138202.1 ras-related protein RABA5d [Momordica charantia]1.3e-114100Show/hide
Query:  MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRST
        MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRST
Subjt:  MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRST

Query:  FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV
        FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV
Subjt:  FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV

Query:  SNGGSKQSESYLSSCCSR
        SNGGSKQSESYLSSCCSR
Subjt:  SNGGSKQSESYLSSCCSR

XP_022932589.1 ras-related protein RABA5d-like [Cucurbita moschata]1.9e-11096.33Show/hide
Query:  MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRST
        MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRST
Subjt:  MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRST

Query:  FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV
        FDSVGRWLDELKTHS+TTVARMLVGNKCDL+NIRDV++EEGT LAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV
Subjt:  FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV

Query:  SNGGSKQSESYLSSCCSR
        +NGGSKQSESYL SCCSR
Subjt:  SNGGSKQSESYLSSCCSR

XP_022956237.1 ras-related protein RABA5d-like [Cucurbita moschata]2.4e-11096.79Show/hide
Query:  MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRST
        MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRST
Subjt:  MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRST

Query:  FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV
        FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGT LAEAEG FFMETSALDSTNVK+AFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV
Subjt:  FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV

Query:  SNGGSKQSESYLSSCCSR
         +GGSKQSESYL SCCSR
Subjt:  SNGGSKQSESYLSSCCSR

XP_038876476.1 ras-related protein RABA5d-like [Benincasa hispida]3.2e-11096.79Show/hide
Query:  MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRST
        MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRST
Subjt:  MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRST

Query:  FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV
        FDSVGRWLDELKTHSDTTVA MLVGNKCDLENIRDVTVEEGT LAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV
Subjt:  FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV

Query:  SNGGSKQSESYLSSCCSR
        +NGGSKQSE Y  SCCSR
Subjt:  SNGGSKQSESYLSSCCSR

TrEMBL top hitse value%identityAlignment
A0A1S3BXI0 ras-related protein RABA5d5.3e-11197.25Show/hide
Query:  MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRST
        MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRST
Subjt:  MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRST

Query:  FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV
        FDSVGRWLDELKTHSDTTVA MLVGNKCDLENIRDVTVEEGT LAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV
Subjt:  FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV

Query:  SNGGSKQSESYLSSCCSR
        +NGGSKQSE YL SCCSR
Subjt:  SNGGSKQSESYLSSCCSR

A0A5A7TS03 Ras-related protein RABA5d5.3e-11197.25Show/hide
Query:  MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRST
        MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRST
Subjt:  MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRST

Query:  FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV
        FDSVGRWLDELKTHSDTTVA MLVGNKCDLENIRDVTVEEGT LAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV
Subjt:  FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV

Query:  SNGGSKQSESYLSSCCSR
        +NGGSKQSE YL SCCSR
Subjt:  SNGGSKQSESYLSSCCSR

A0A6J1CAE9 ras-related protein RABA5d6.1e-115100Show/hide
Query:  MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRST
        MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRST
Subjt:  MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRST

Query:  FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV
        FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV
Subjt:  FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV

Query:  SNGGSKQSESYLSSCCSR
        SNGGSKQSESYLSSCCSR
Subjt:  SNGGSKQSESYLSSCCSR

A0A6J1EXF0 ras-related protein RABA5d-like9.1e-11196.33Show/hide
Query:  MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRST
        MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRST
Subjt:  MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRST

Query:  FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV
        FDSVGRWLDELKTHS+TTVARMLVGNKCDL+NIRDV++EEGT LAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV
Subjt:  FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV

Query:  SNGGSKQSESYLSSCCSR
        +NGGSKQSESYL SCCSR
Subjt:  SNGGSKQSESYLSSCCSR

A0A6J1GVS1 ras-related protein RABA5d-like1.2e-11096.79Show/hide
Query:  MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRST
        MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRST
Subjt:  MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRST

Query:  FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV
        FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGT LAEAEG FFMETSALDSTNVK+AFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV
Subjt:  FDSVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLV

Query:  SNGGSKQSESYLSSCCSR
         +GGSKQSESYL SCCSR
Subjt:  SNGGSKQSESYLSSCCSR

SwissProt top hitse value%identityAlignment
P19892 Ras-related protein RABA5e2.6e-9483.26Show/hide
Query:  SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFD
        SSDDEG EEYLFKIV+IGDSAVGKSNLLSRYARNEF+ +SKATIGVEFQTQ M+I+GKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDI+RR+TF+
Subjt:  SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFD

Query:  SVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLVSN
        SVGRWLDELK HSDTTVARMLVGNKCDLENIR V+VEEG  LAE EGLFF+ETSALDSTNVK AFE+VI +IYNNVSRK LNSDTYK EL+VNRVSLV +
Subjt:  SVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLVSN

Query:  GGSKQSESYLSSCCS
          S   +S   SCCS
Subjt:  GGSKQSESYLSSCCS

P28187 Ras-related protein RABA5c4.1e-9281.48Show/hide
Query:  SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFD
        S DDE GEEYLFKIVIIGDSAVGKSNLL+RYARNEFN +SKATIGVEFQTQ M IDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDI+R STF+
Subjt:  SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFD

Query:  SVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLVSN
        +VGRWLDEL THSDTTVA+ML+GNKCDLE+IR V+VEEG  LAE+EGLFFMETSALDSTNVK AFE+VIREIY+N+SRK LNSD+YK EL+VNRVSLV N
Subjt:  SVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLVSN

Query:  GGSKQSESYLSSCCSR
           +   +   SCCSR
Subjt:  GGSKQSESYLSSCCSR

Q9FGK5 Ras-related protein RABA5a3.6e-7265.45Show/hide
Query:  SDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFDS
        S+D+  E+YLFKIV+IGDSAVGKSNLL+R+AR+EF  +SK+TIGVEFQTQ MDI+GKE+KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TF S
Subjt:  SDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFDS

Query:  VGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLVSNG
        +GRWL+EL THSD  V  +LVGNK DL+++R+V+  EG  LAEA+GLFFMETSALDS+NV  AFE V++EIYN +SRKV++S     EL+    + +SNG
Subjt:  VGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLVSNG

Query:  ------GSKQSESYLSSCCS
                 Q E     CCS
Subjt:  ------GSKQSESYLSSCCS

Q9SIP0 Ras-related protein RABA5d9.4e-9784.72Show/hide
Query:  SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFD
        SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFN HSKATIGVEFQTQ M+I+GKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTF+
Subjt:  SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFD

Query:  SVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSV-NRVSLVS
        SVGRWLDELKTHSDTTVARMLVGNKCDLE+IR V+VEEG  LAE EGLFFMETSALDSTNVK AFE+VIR+IY N+SRK LNSDTYK ELS+ NRVSLV 
Subjt:  SVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSV-NRVSLVS

Query:  NGGSKQSESYLSSCCS
        +     ++ +  SCCS
Subjt:  NGGSKQSESYLSSCCS

Q9SRS5 Ras-related protein RABA5b8.0e-8877.1Show/hide
Query:  DDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFDSV
        +D+ GEEYLFKIV+IGDSAVGKSNLLSR++R+EF+ +SKATIGVEFQTQ+++I+GKEVKAQIWDTAGQERFRAVTSAYYRGA GAL+VYDI+R  TF+SV
Subjt:  DDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFDSV

Query:  GRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLVSNGG
         RWL EL TH DT VA+MLVGNKCDLE+IR V+VEEG  LAE EGLFFMETSALD+TNV +AFEIVIREI+NNVSRK+LNSD YKAELSVNRVSLV+N  
Subjt:  GRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLVSNGG

Query:  SKQSESYLSSCCSR
          +S     SCCSR
Subjt:  SKQSESYLSSCCSR

Arabidopsis top hitse value%identityAlignment
AT1G05810.1 RAB GTPase homolog A5E1.8e-9583.26Show/hide
Query:  SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFD
        SSDDEG EEYLFKIV+IGDSAVGKSNLLSRYARNEF+ +SKATIGVEFQTQ M+I+GKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDI+RR+TF+
Subjt:  SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFD

Query:  SVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLVSN
        SVGRWLDELK HSDTTVARMLVGNKCDLENIR V+VEEG  LAE EGLFF+ETSALDSTNVK AFE+VI +IYNNVSRK LNSDTYK EL+VNRVSLV +
Subjt:  SVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLVSN

Query:  GGSKQSESYLSSCCS
          S   +S   SCCS
Subjt:  GGSKQSESYLSSCCS

AT2G31680.1 RAB GTPase homolog A5D6.7e-9884.72Show/hide
Query:  SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFD
        SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFN HSKATIGVEFQTQ M+I+GKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTF+
Subjt:  SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFD

Query:  SVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSV-NRVSLVS
        SVGRWLDELKTHSDTTVARMLVGNKCDLE+IR V+VEEG  LAE EGLFFMETSALDSTNVK AFE+VIR+IY N+SRK LNSDTYK ELS+ NRVSLV 
Subjt:  SVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSV-NRVSLVS

Query:  NGGSKQSESYLSSCCS
        +     ++ +  SCCS
Subjt:  NGGSKQSESYLSSCCS

AT2G43130.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein2.9e-9381.48Show/hide
Query:  SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFD
        S DDE GEEYLFKIVIIGDSAVGKSNLL+RYARNEFN +SKATIGVEFQTQ M IDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDI+R STF+
Subjt:  SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFD

Query:  SVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLVSN
        +VGRWLDEL THSDTTVA+ML+GNKCDLE+IR V+VEEG  LAE+EGLFFMETSALDSTNVK AFE+VIREIY+N+SRK LNSD+YK EL+VNRVSLV N
Subjt:  SVGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLVSN

Query:  GGSKQSESYLSSCCSR
           +   +   SCCSR
Subjt:  GGSKQSESYLSSCCSR

AT3G07410.1 RAB GTPase homolog A5B5.7e-8977.1Show/hide
Query:  DDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFDSV
        +D+ GEEYLFKIV+IGDSAVGKSNLLSR++R+EF+ +SKATIGVEFQTQ+++I+GKEVKAQIWDTAGQERFRAVTSAYYRGA GAL+VYDI+R  TF+SV
Subjt:  DDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFDSV

Query:  GRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLVSNGG
         RWL EL TH DT VA+MLVGNKCDLE+IR V+VEEG  LAE EGLFFMETSALD+TNV +AFEIVIREI+NNVSRK+LNSD YKAELSVNRVSLV+N  
Subjt:  GRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLVSNGG

Query:  SKQSESYLSSCCSR
          +S     SCCSR
Subjt:  SKQSESYLSSCCSR

AT5G47520.1 RAB GTPase homolog A5A2.5e-7365.45Show/hide
Query:  SDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFDS
        S+D+  E+YLFKIV+IGDSAVGKSNLL+R+AR+EF  +SK+TIGVEFQTQ MDI+GKE+KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR TF S
Subjt:  SDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFDS

Query:  VGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLVSNG
        +GRWL+EL THSD  V  +LVGNK DL+++R+V+  EG  LAEA+GLFFMETSALDS+NV  AFE V++EIYN +SRKV++S     EL+    + +SNG
Subjt:  VGRWLDELKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLVSNG

Query:  ------GSKQSESYLSSCCS
                 Q E     CCS
Subjt:  ------GSKQSESYLSSCCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCGTCGGACGATGAAGGCGGCGAGGAGTACCTGTTCAAGATCGTCATAATCGGAGACTCCGCCGTCGGCAAATCCAATTTGCTCTCTCGCTACGCCAGGAACGA
GTTCAATCTCCACTCCAAGGCCACCATCGGCGTCGAATTTCAGACTCAGGTTATGGACATCGACGGCAAGGAGGTTAAGGCTCAGATTTGGGACACCGCCGGCCAGGAGC
GGTTCCGCGCCGTCACCTCCGCGTACTACCGTGGCGCTGTCGGTGCTCTCGTCGTCTACGATATCAGCCGCCGCTCCACTTTCGACAGTGTTGGCCGATGGCTCGACGAG
CTCAAGACTCATTCCGATACAACTGTGGCAAGGATGCTAGTCGGGAACAAATGCGACTTGGAGAACATCAGGGACGTGACTGTTGAAGAAGGCACGCAACTTGCGGAGGC
CGAAGGGTTGTTCTTCATGGAGACATCTGCTCTAGATTCAACAAATGTTAAAAGGGCTTTTGAGATCGTGATTCGAGAAATATACAACAATGTCAGCAGGAAGGTCCTGA
ATTCCGATACCTACAAAGCAGAATTATCCGTCAACCGCGTAAGCCTCGTCAGCAACGGCGGATCAAAGCAATCTGAAAGCTATTTGTCTTCTTGCTGTTCGAGG
mRNA sequenceShow/hide mRNA sequence
ATGTCGTCGTCGGACGATGAAGGCGGCGAGGAGTACCTGTTCAAGATCGTCATAATCGGAGACTCCGCCGTCGGCAAATCCAATTTGCTCTCTCGCTACGCCAGGAACGA
GTTCAATCTCCACTCCAAGGCCACCATCGGCGTCGAATTTCAGACTCAGGTTATGGACATCGACGGCAAGGAGGTTAAGGCTCAGATTTGGGACACCGCCGGCCAGGAGC
GGTTCCGCGCCGTCACCTCCGCGTACTACCGTGGCGCTGTCGGTGCTCTCGTCGTCTACGATATCAGCCGCCGCTCCACTTTCGACAGTGTTGGCCGATGGCTCGACGAG
CTCAAGACTCATTCCGATACAACTGTGGCAAGGATGCTAGTCGGGAACAAATGCGACTTGGAGAACATCAGGGACGTGACTGTTGAAGAAGGCACGCAACTTGCGGAGGC
CGAAGGGTTGTTCTTCATGGAGACATCTGCTCTAGATTCAACAAATGTTAAAAGGGCTTTTGAGATCGTGATTCGAGAAATATACAACAATGTCAGCAGGAAGGTCCTGA
ATTCCGATACCTACAAAGCAGAATTATCCGTCAACCGCGTAAGCCTCGTCAGCAACGGCGGATCAAAGCAATCTGAAAGCTATTTGTCTTCTTGCTGTTCGAGG
Protein sequenceShow/hide protein sequence
MSSSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNLHSKATIGVEFQTQVMDIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFDSVGRWLDE
LKTHSDTTVARMLVGNKCDLENIRDVTVEEGTQLAEAEGLFFMETSALDSTNVKRAFEIVIREIYNNVSRKVLNSDTYKAELSVNRVSLVSNGGSKQSESYLSSCCSR