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MS014382 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS014382
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionATP-dependent DNA helicase 2 subunit KU70
Genome locationscaffold19:494563..494872
RNA-Seq ExpressionMS014382
SyntenyMS014382
Gene Ontology termsGO:0000723 - telomere maintenance (biological process)
GO:0006303 - double-strand break repair via nonhomologous end joining (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0043564 - Ku70:Ku80 complex (cellular component)
GO:0003678 - DNA helicase activity (molecular function)
GO:0003684 - damaged DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0042162 - telomeric DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137913.1 ATP-dependent DNA helicase 2 subunit KU70 isoform X1 [Momordica charantia]2.9e-17100Show/hide
Query:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
        MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
Subjt:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
XP_022137914.1 ATP-dependent DNA helicase 2 subunit KU70 isoform X2 [Momordica charantia]2.9e-17100Show/hide
Query:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
        MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
Subjt:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
XP_038899651.1 ATP-dependent DNA helicase 2 subunit KU70 isoform X1 [Benincasa hispida]2.9e-17100Show/hide
Query:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
        MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
Subjt:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
XP_038899658.1 ATP-dependent DNA helicase 2 subunit KU70 isoform X2 [Benincasa hispida]2.9e-17100Show/hide
Query:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
        MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
Subjt:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
XP_038899663.1 ATP-dependent DNA helicase 2 subunit KU70 isoform X3 [Benincasa hispida]2.9e-17100Show/hide
Query:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
        MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
Subjt:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
TrEMBL top hitse value%identityAlignment
A0A1S3BXF2 ATP-dependent DNA helicase 2 subunit KU704.1e-1797.92Show/hide
Query:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
        MDLDPDEVFRDDDDDPDNP FQERESTKELAVYLVDASPKMFSTTCPS
Subjt:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
A0A5A7TSU2 ATP-dependent DNA helicase 2 subunit KU704.1e-1797.92Show/hide
Query:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
        MDLDPDEVFRDDDDDPDNP FQERESTKELAVYLVDASPKMFSTTCPS
Subjt:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
A0A5D3CYZ9 ATP-dependent DNA helicase 2 subunit KU704.1e-1797.92Show/hide
Query:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
        MDLDPDEVFRDDDDDPDNP FQERESTKELAVYLVDASPKMFSTTCPS
Subjt:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
A0A6J1C8L7 ATP-dependent DNA helicase 2 subunit KU70 isoform X21.4e-17100Show/hide
Query:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
        MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
Subjt:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
A0A6J1CBN3 ATP-dependent DNA helicase 2 subunit KU70 isoform X11.4e-17100Show/hide
Query:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
        MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
Subjt:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
SwissProt top hitse value%identityAlignment
Q7F1M0 ATP-dependent DNA helicase 2 subunit KU708.2e-0762.79Show/hide
Query:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFS
        MDLDP+ +FRDD D+ D+ + QERE+ KE+ VYL+DASPKMF+
Subjt:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFS
Q9FQ08 ATP-dependent DNA helicase 2 subunit KU702.6e-1368.75Show/hide
Query:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
        M+LDPD+VFRD+D+DP+N  FQE+E++KE  VYL+DASPKMF +TCPS
Subjt:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
Arabidopsis top hitse value%identityAlignment
AT1G16970.1 KU70 homolog1.9e-1468.75Show/hide
Query:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS
        M+LDPD+VFRD+D+DP+N  FQE+E++KE  VYL+DASPKMF +TCPS
Subjt:  MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGGACCCAGATGAGGTTTTCAGAGACGACGATGACGATCCTGACAATCCACTCTTTCAGGAAAGGGAGTCGACCAAGGAACTCGCGGTTTACTTGGTGGATGC
TTCCCCTAAAATGTTCAGCACCACTTGCCCCTCGGTGAGTTTTTACACTCTTTGCTTCTCCTCATACTTTACTTTTACTTTGTTTCAATTCTTG
mRNA sequenceShow/hide mRNA sequence
ATGGATTTGGACCCAGATGAGGTTTTCAGAGACGACGATGACGATCCTGACAATCCACTCTTTCAGGAAAGGGAGTCGACCAAGGAACTCGCGGTTTACTTGGTGGATGC
TTCCCCTAAAATGTTCAGCACCACTTGCCCCTCGGTGAGTTTTTACACTCTTTGCTTCTCCTCATACTTTACTTTTACTTTGTTTCAATTCTTG
Protein sequenceShow/hide protein sequence
MDLDPDEVFRDDDDDPDNPLFQERESTKELAVYLVDASPKMFSTTCPSVSFYTLCFSSYFTFTLFQFL